Miyakogusa Predicted Gene

Lj3g3v0478140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0478140.1 Non Characterized Hit- tr|J3MFT7|J3MFT7_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB06G2,36.41,8e-16,SAE2,DNA repair protein Sae2/CtIP; seg,NULL;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; RETINOBLAST,CUFF.40885.1
         (606 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g036940.1 | gamma response-like protein, putative | HC | c...   456   e-128

>Medtr8g036940.1 | gamma response-like protein, putative | HC |
           chr8:13460904-13457443 | 20130731
          Length = 486

 Score =  456 bits (1172), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 271/508 (53%), Positives = 327/508 (64%), Gaps = 73/508 (14%)

Query: 30  DEKLISGLSTILVASIQEARDRISQIEYVFCSQIYPHFQSTSKHSDSKRRRIEELEREVD 89
           DEK++SGLST+LVASIQEA+D+ISQIEYVFCSQ+YP+FQSTSK+SDSKRRRI ELE E+D
Sbjct: 34  DEKVVSGLSTLLVASIQEAKDKISQIEYVFCSQLYPNFQSTSKNSDSKRRRITELEHELD 93

Query: 90  EGMALHKTLTELVRSKELSLRASEEKRKSAVAKLERCESETASLLGRIDXXXXXXXXXXX 149
           EGM L K L +L+RSK+  L++ EEKRK+AVAKLE CESE A LLG+I            
Sbjct: 94  EGMTLQKNLLDLIRSKDSLLKSCEEKRKTAVAKLESCESENAQLLGKIVDLEERLRLKVK 153

Query: 150 XXXXXXXXXVESEGSYRNLVENVESMSCELQAEKLKRNRLTEAYKRLKSQHVYLRQKVGL 209
                     E+EG    LVE VE + CE++ EKLKRNRL EAYKRLKSQHVYLR+KVGL
Sbjct: 154 DVEVLELKCDENEGLCGKLVEEVELLKCEVKDEKLKRNRLNEAYKRLKSQHVYLRKKVGL 213

Query: 210 TEENMLSRSKLPPGSDKHQSPVTEPGLAFEDPDITMGACKATDMESEIPEDDFGGLENAT 269
            EENM+  S+   G  K+QSP+ E G+AFED D  +                        
Sbjct: 214 NEENMIRESESDLG--KNQSPIVEQGVAFEDRDTEV------------------------ 247

Query: 270 PDVFVSVRNANEVKEKTLGDDRGANLIPPSSSFYVRPKCPSSDHPLAISAGLENTTPDVF 329
            DV V+ +                          V+ + P  D       GLE   P+VF
Sbjct: 248 -DVCVNAK--------------------------VKIEIPDEDF-----EGLEKKIPEVF 275

Query: 330 VSVRDANEVKEKTLEDDRGGKLIPPSSS-FYVRPKCPSSAKVASVSGTKRPAPSWRLTRS 388
           V+VRD NEVKEK LEDD+G    P SSS F+   KCP S K+ASVSGTKRPAPSWR TRS
Sbjct: 276 VAVRDINEVKEKALEDDKGA---PSSSSGFHGVQKCPPSTKLASVSGTKRPAPSWRQTRS 332

Query: 389 HQSRAGPDPHDDFLDTPLENIRVNLNKDLNKADLPCPIQKDISMNSSDDETQDLNAESSP 448
           HQSRAG D HDDFLDTPLENIR NLNKDLNK D   PIQKDISM+SSDDETQDLNA+SSP
Sbjct: 333 HQSRAGNDLHDDFLDTPLENIRDNLNKDLNKEDPAQPIQKDISMDSSDDETQDLNAKSSP 392

Query: 449 QKKQSSITVADKRSFKYIEPVMKKAELEHLNKDLKPGLPCPIQR---DKCMDSSDDETQD 505
            KKQSSITVA K+SFKYIEPV KKA+ E+L      G+ C   R   +  + ++D +  D
Sbjct: 393 PKKQSSITVASKKSFKYIEPVRKKADRENLK-----GVDCKQCRKFYEAVLPNADGKDPD 447

Query: 506 LNAKSSPQKKQSSITVADKKSFKYIEPV 533
            N ++S  +    ++   +  +KY+ P+
Sbjct: 448 SNKQNSRCEHHDGVS---RHRYKYVPPL 472



 Score =  230 bits (587), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 109/132 (82%), Positives = 120/132 (90%), Gaps = 1/132 (0%)

Query: 476 EHLNKDLKPGLPC-PIQRDKCMDSSDDETQDLNAKSSPQKKQSSITVADKKSFKYIEPVR 534
           ++LNKDL    P  PIQ+D  MDSSDDETQDLNAKSSP KKQSSITVA KKSFKYIEPVR
Sbjct: 355 DNLNKDLNKEDPAQPIQKDISMDSSDDETQDLNAKSSPPKKQSSITVASKKSFKYIEPVR 414

Query: 535 KKAERENLKGVECKQCRKFYDAVLPNADGKDPDNSKQNFRCEHLDGVSRHRYRYVPPMTP 594
           KKA+RENLKGV+CKQCRKFY+AVLPNADGKDPD++KQN RCEH DGVSRHRY+YVPP+TP
Sbjct: 415 KKADRENLKGVDCKQCRKFYEAVLPNADGKDPDSNKQNSRCEHHDGVSRHRYKYVPPLTP 474

Query: 595 EGFWNIGFESEM 606
           EGFWNIGFESE+
Sbjct: 475 EGFWNIGFESEL 486