Miyakogusa Predicted Gene
- Lj3g3v0478110.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0478110.2 Non Characterized Hit- tr|I1MJM3|I1MJM3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3736
PE=,77.95,0,seg,NULL; Surp module (SWAP domain),SWAP/Surp;
Suppressor-of-White-APricot splicing regulat,SWAP/Sur,CUFF.40906.2
(433 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g036890.1 | suppressor-of-white-APricot splicing regulator... 619 e-177
Medtr8g036890.2 | suppressor-of-white-APricot splicing regulator... 617 e-177
Medtr8g036260.1 | suppressor-of-white-APricot splicing regulator... 417 e-117
Medtr8g036255.1 | SURP and G-patch domain protein | HC | chr8:13... 149 7e-36
>Medtr8g036890.1 | suppressor-of-white-APricot splicing regulator |
HC | chr8:13445831-13440568 | 20130731
Length = 439
Score = 619 bits (1595), Expect = e-177, Method: Compositional matrix adjust.
Identities = 332/442 (75%), Positives = 357/442 (80%), Gaps = 12/442 (2%)
Query: 1 MDKGPPHSLFVNDGSFMARFKQLQQEQGKGKNTKLEDSKPIKVVSRPLTPNPSIGKATDA 60
MDKGPP +LFVNDGSFM RF+QLQQEQ +GKN K EDSKPIKVVS PLT PSI KA DA
Sbjct: 1 MDKGPPPTLFVNDGSFMERFRQLQQEQERGKNAKPEDSKPIKVVSGPLTSKPSISKANDA 60
Query: 61 RKTSQAGSSGKLAFSLKQKSKLVPPPIKLTDEDEEETNAGDVSNDAPSKRQKLGQDDDAE 120
+K+SQ GSSGKLAFSLKQKSKLVPPP+KL D+DE+E +AG VS DA +KRQKLGQDD E
Sbjct: 61 KKSSQGGSSGKLAFSLKQKSKLVPPPVKLADDDEDEIDAGYVSIDALTKRQKLGQDDGIE 120
Query: 121 QSSRPLDVAPPSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDERCAD 180
QSSR LDVAPP PSDPTVKKVADK ASFVAKNGR FEDVT QKNPGD+PFKFLFD +C+D
Sbjct: 121 QSSRQLDVAPPPPSDPTVKKVADKFASFVAKNGRPFEDVTWQKNPGDSPFKFLFDVKCSD 180
Query: 181 YKYYEYRLGQEEKTLLQYREPQAIHYVPPLGTSISSSRPANGPQRSSEQRPTYQIPASAL 240
YKYYE+RL QEEK L Q EPQA GTSI SSRP NGPQRSS+Q+ TYQIPASAL
Sbjct: 181 YKYYEHRLAQEEKALSQSNEPQAYQNA---GTSIPSSRPTNGPQRSSQQQSTYQIPASAL 237
Query: 241 YESGDVPRTXXXXXXXXXXXXXXXXXXXXXXXXLALMEFYMKKAAREERSKQPKQSKDEM 300
Y+S DVPR LALMEFYMKKAA+EE+ KQP+ SKDEM
Sbjct: 238 YDSADVPRGSGSAGQAFSVGSSDEPGGSSKANSLALMEFYMKKAAQEEKFKQPRHSKDEM 297
Query: 301 PPPASLQ---------GKKGHHMGDYIPLEELEKFMASCNDAGAQKVLKETAEKAKIQAD 351
PPP SLQ GKKGHHMGDYIP EELEKF+ASCNDA A K KE AE+AKIQA
Sbjct: 298 PPPPSLQGSTYDASASGKKGHHMGDYIPQEELEKFLASCNDAAAMKAAKEAAERAKIQAY 357
Query: 352 NVGHKLLSKMGWKEGEGLGGSRKGISDPIMAGNVKKDHLGVGAVQPGEVTSEDDIYEQYK 411
NVGHKLLSKMGWKEGEGLGGSRKGI+DPIMAG+VKKD+LGVGAVQPGEVT EDDIYEQYK
Sbjct: 358 NVGHKLLSKMGWKEGEGLGGSRKGIADPIMAGSVKKDNLGVGAVQPGEVTPEDDIYEQYK 417
Query: 412 KRMMLGYRHRPNPLNNPRKAYY 433
KRMMLGYRHRPNPLNNPRKAYY
Sbjct: 418 KRMMLGYRHRPNPLNNPRKAYY 439
>Medtr8g036890.2 | suppressor-of-white-APricot splicing regulator |
HC | chr8:13445831-13440568 | 20130731
Length = 438
Score = 617 bits (1592), Expect = e-177, Method: Compositional matrix adjust.
Identities = 332/442 (75%), Positives = 357/442 (80%), Gaps = 13/442 (2%)
Query: 1 MDKGPPHSLFVNDGSFMARFKQLQQEQGKGKNTKLEDSKPIKVVSRPLTPNPSIGKATDA 60
MDKGPP +LFVNDGSFM RF+QLQQEQ +GKN K EDSKPIKVVS PLT PSI KA DA
Sbjct: 1 MDKGPPPTLFVNDGSFMERFRQLQQEQERGKNAKPEDSKPIKVVSGPLTSKPSISKANDA 60
Query: 61 RKTSQAGSSGKLAFSLKQKSKLVPPPIKLTDEDEEETNAGDVSNDAPSKRQKLGQDDDAE 120
+K+SQ GSSGKLAFSLKQKSKLVPPP+KL D+DE+E +AG VS DA +KRQKLGQDD E
Sbjct: 61 KKSSQGGSSGKLAFSLKQKSKLVPPPVKLADDDEDEIDAGYVSIDALTKRQKLGQDDGIE 120
Query: 121 QSSRPLDVAPPSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDERCAD 180
QSSR LDVAPP PSDPTVKKVADK ASFVAKNGR FEDVT QKNPGD+PFKFLFD +C+D
Sbjct: 121 QSSRQLDVAPPPPSDPTVKKVADKFASFVAKNGRPFEDVTWQKNPGDSPFKFLFDVKCSD 180
Query: 181 YKYYEYRLGQEEKTLLQYREPQAIHYVPPLGTSISSSRPANGPQRSSEQRPTYQIPASAL 240
YKYYE+RL QEEK L Q EPQA GTSI SSRP NGPQRSS+Q+ TYQIPASAL
Sbjct: 181 YKYYEHRLAQEEKALSQSNEPQAYQN----GTSIPSSRPTNGPQRSSQQQSTYQIPASAL 236
Query: 241 YESGDVPRTXXXXXXXXXXXXXXXXXXXXXXXXLALMEFYMKKAAREERSKQPKQSKDEM 300
Y+S DVPR LALMEFYMKKAA+EE+ KQP+ SKDEM
Sbjct: 237 YDSADVPRGSGSAGQAFSVGSSDEPGGSSKANSLALMEFYMKKAAQEEKFKQPRHSKDEM 296
Query: 301 PPPASLQ---------GKKGHHMGDYIPLEELEKFMASCNDAGAQKVLKETAEKAKIQAD 351
PPP SLQ GKKGHHMGDYIP EELEKF+ASCNDA A K KE AE+AKIQA
Sbjct: 297 PPPPSLQGSTYDASASGKKGHHMGDYIPQEELEKFLASCNDAAAMKAAKEAAERAKIQAY 356
Query: 352 NVGHKLLSKMGWKEGEGLGGSRKGISDPIMAGNVKKDHLGVGAVQPGEVTSEDDIYEQYK 411
NVGHKLLSKMGWKEGEGLGGSRKGI+DPIMAG+VKKD+LGVGAVQPGEVT EDDIYEQYK
Sbjct: 357 NVGHKLLSKMGWKEGEGLGGSRKGIADPIMAGSVKKDNLGVGAVQPGEVTPEDDIYEQYK 416
Query: 412 KRMMLGYRHRPNPLNNPRKAYY 433
KRMMLGYRHRPNPLNNPRKAYY
Sbjct: 417 KRMMLGYRHRPNPLNNPRKAYY 438
>Medtr8g036260.1 | suppressor-of-white-APricot splicing regulator,
putative | HC | chr8:13428137-13425082 | 20130731
Length = 362
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/308 (72%), Positives = 243/308 (78%), Gaps = 3/308 (0%)
Query: 1 MDKGPPHSLFVNDGSFMARFKQLQQEQGKGKNTKLEDSKPIKVVSRPLTPNPSIGKATDA 60
MDKGPP +LFVNDGSFM RF+QLQQEQ +GKN K EDSKPIKVVS PLTP PSI KA DA
Sbjct: 1 MDKGPPPTLFVNDGSFMERFRQLQQEQERGKNAKPEDSKPIKVVSGPLTPKPSISKANDA 60
Query: 61 RKTSQAGSSGKLAFSLKQKSKLVPPPIKLTDEDEEETNAGDVSNDAPSKRQKLGQDDDAE 120
+K+SQ GSSGKLAFSLKQKSKLVPPP+KL D+DE+E +AG VS DAP+KRQKLGQDD E
Sbjct: 61 KKSSQGGSSGKLAFSLKQKSKLVPPPVKLADDDEDEIDAGYVSIDAPTKRQKLGQDDGIE 120
Query: 121 QSSRPLDVAPPSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDERCAD 180
QSSR LDVAPP PSDPTVKKVADKLASFVAKNGR FEDVTRQKNPGD+PFKFLFD +C+D
Sbjct: 121 QSSRQLDVAPPPPSDPTVKKVADKLASFVAKNGRPFEDVTRQKNPGDSPFKFLFDVKCSD 180
Query: 181 YKYYEYRLGQEEKTLLQYREPQAIHYVPPLGTSISSSRPANGPQRSSEQRPTYQIPASAL 240
YKYYE+RL QEEK L Q EPQA GTS SSRP NGPQRSS+Q+ TYQIPASAL
Sbjct: 181 YKYYEHRLAQEEKALSQSNEPQAYQNA---GTSFPSSRPTNGPQRSSQQQSTYQIPASAL 237
Query: 241 YESGDVPRTXXXXXXXXXXXXXXXXXXXXXXXXLALMEFYMKKAAREERSKQPKQSKDEM 300
Y+S DVPR LALMEFYMKKAA+EE+ KQP+ SKDEM
Sbjct: 238 YDSADVPRGSGSAGQAFSVGSSDEPGGSSKANSLALMEFYMKKAAQEEKFKQPRHSKDEM 297
Query: 301 PPPASLQG 308
PPP SLQG
Sbjct: 298 PPPPSLQG 305
>Medtr8g036255.1 | SURP and G-patch domain protein | HC |
chr8:13423681-13423062 | 20130731
Length = 73
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 69/73 (94%), Positives = 72/73 (98%)
Query: 361 MGWKEGEGLGGSRKGISDPIMAGNVKKDHLGVGAVQPGEVTSEDDIYEQYKKRMMLGYRH 420
MGWKEGEGLGGSRKGI+DPIMAG+VKKD+LGVGAVQPGEVT EDDIYEQYKKRMMLGYRH
Sbjct: 1 MGWKEGEGLGGSRKGIADPIMAGSVKKDNLGVGAVQPGEVTPEDDIYEQYKKRMMLGYRH 60
Query: 421 RPNPLNNPRKAYY 433
RPNPLNNPRKAYY
Sbjct: 61 RPNPLNNPRKAYY 73