Miyakogusa Predicted Gene

Lj3g3v0462330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0462330.1 Non Characterized Hit- tr|B9G098|B9G098_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,33.64,6e-18,coiled-coil,NULL,CUFF.40836.1
         (223 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g067720.1 | hypothetical protein | HC | chr1:29240101-2923...   197   7e-51
Medtr1g067710.1 | hypothetical protein | HC | chr1:29237256-2923...   104   7e-23

>Medtr1g067720.1 | hypothetical protein | HC |
           chr1:29240101-29237655 | 20130731
          Length = 150

 Score =  197 bits (501), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 99/128 (77%), Positives = 113/128 (88%)

Query: 1   MEQYLQNMKTLRSQMNDVEDQAAKISAEEHMQLTNIRTLENDIESAKSEIAQVVEDTEKM 60
           ME+YLQ MKTLRS MND EDQAAKISAEE MQ+TNIRTLE DI+SAKSEIAQVVEDTEKM
Sbjct: 1   MEEYLQYMKTLRSHMNDAEDQAAKISAEEQMQMTNIRTLEIDIDSAKSEIAQVVEDTEKM 60

Query: 61  EKAKGEVCSKILKTQKKIASLESDTSKLTQTLGLIQQEIVGLSTKLSEKRAYYTKVSEDM 120
            K+K E+CSKI + QKK+ASL+SDTS+LTQT+ LI+QE VGLS KLSE+RAYY+KV+EDM
Sbjct: 61  NKSKVEICSKIFENQKKLASLDSDTSRLTQTMELIRQEKVGLSAKLSERRAYYSKVAEDM 120

Query: 121 TAKLQNQQ 128
            AK Q QQ
Sbjct: 121 RAKFQKQQ 128


>Medtr1g067710.1 | hypothetical protein | HC |
           chr1:29237256-29235415 | 20130731
          Length = 136

 Score =  104 bits (259), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 59/69 (85%)

Query: 155 QVEGKCDADGNLIVDNLGSDARNNLITELDSAKARLGEICTLKSKVLMENNKIKLAIEDV 214
           Q++G+  ADGN  +DNLGSDA+NNLIT+LDSAKARL EI  +KSKVLM+ NKIKLAIEDV
Sbjct: 4   QLQGRTSADGNRAIDNLGSDAKNNLITDLDSAKARLDEILVMKSKVLMDINKIKLAIEDV 63

Query: 215 KCRGNEFKS 223
           KCR NEFK 
Sbjct: 64  KCRENEFKP 72