Miyakogusa Predicted Gene

Lj3g3v0461620.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0461620.1 Non Characterized Hit- tr|A2ZTJ0|A2ZTJ0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,69.74,1e-16,S4,RNA-binding S4 domain;
AA_TRNA_LIGASE_I,Aminoacyl-tRNA synthetase, class I, conserved site;
Nucle,CUFF.40876.1
         (500 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g466250.1 | tyrosyl-tRNA synthetase | HC | chr3:27231447-2...   834   0.0  
Medtr4g121070.1 | tyrosyl-tRNA synthetase | HC | chr4:50128516-5...   816   0.0  

>Medtr3g466250.1 | tyrosyl-tRNA synthetase | HC |
           chr3:27231447-27233269 | 20130731
          Length = 500

 Score =  834 bits (2154), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/510 (82%), Positives = 447/510 (87%), Gaps = 20/510 (3%)

Query: 1   MTTTFASRTILSSHPTKLFILPFKPPSSH------FPLRFTRATCTLHSXXXXXXXXXXX 54
           M T FASR+I  SH  K    PF PP S+       PLRFTR TCTL             
Sbjct: 1   MATNFASRSIFFSHSIKHPFFPFTPPLSYSHLPFSLPLRFTRTTCTLQHQHHQQPQTT-- 58

Query: 55  NGRSVIGILEERGLLESITSDALRSASST---APLRVYCGFDPTAESLHLGNLLGIIVLS 111
             R+VI ILEERGLL+S+T+D+LRS SS    APL+VYCGFDPTAESLHLGNLLG+IVLS
Sbjct: 59  --RNVIRILEERGLLDSLTNDSLRSISSNTINAPLKVYCGFDPTAESLHLGNLLGLIVLS 116

Query: 112 WFRRCGHNVVALIGGATARVGDPSGKSIERPELDVETLERNTLGIGNTIRTILGRAQNLN 171
           WFRR GHNVVALIGGATARVGDPSGK+IERP+LD ETLERNT+GI NTIRTILGR+QN N
Sbjct: 117 WFRRSGHNVVALIGGATARVGDPSGKNIERPQLDGETLERNTVGIENTIRTILGRSQNPN 176

Query: 172 LEELSVXXXXXXXGNLF-DSSVVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRK 230
            +EL+V       GN F D SVVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRK
Sbjct: 177 FKELNVN------GNEFCDDSVVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRK 230

Query: 231 RLESEQGMSYTEFTYQLLQGYDFLHLFQNEGVSVQIGGSDQWGNITAGTELVRKILQVES 290
           RLESEQGMSYTEFTYQLLQGYDFLHLFQNEGV+VQIGGSDQWGNITAGTEL+RKILQVE 
Sbjct: 231 RLESEQGMSYTEFTYQLLQGYDFLHLFQNEGVNVQIGGSDQWGNITAGTELIRKILQVEG 290

Query: 291 AVYGLTFPLLLKSDGTKFGKSEDGAIWLSPVLLSPYKFYQYFFSVPDADVVRFLKILTFL 350
             YGLTFPLLLKSDGTKFGKSEDGAIWLSP +LSPYKFYQYFFSVPDADVVRFLKILTFL
Sbjct: 291 GTYGLTFPLLLKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLKILTFL 350

Query: 351 DIEEIVKLEEEMVKPGYAPNTAQRRLAEEVTRFVHGEDGLREALRATEALRPGSETKLDW 410
           DI+EIVKLEEE+ KPGY PNTAQRRLAEEVT+FVHGEDGL EALRATEALRPGSETKLDW
Sbjct: 351 DIDEIVKLEEEIKKPGYVPNTAQRRLAEEVTKFVHGEDGLNEALRATEALRPGSETKLDW 410

Query: 411 KTIEGIAEDVPSCSLAYDEVLNQSLVDLSVSSGLFDSKSAARRLLKQGGLYLNNSRVNSE 470
           KTIEGIAEDVPSCSLAYD+VLNQSLVDLSVSSGLFDSKSAARRLLKQGG+YLNNSRV+SE
Sbjct: 411 KTIEGIAEDVPSCSLAYDDVLNQSLVDLSVSSGLFDSKSAARRLLKQGGVYLNNSRVDSE 470

Query: 471 NKKIEVADIVDGKVLLLSAGKKNKVLVRIA 500
           NK+IEVADIVDGKVLLLSAGKKNKVLVRIA
Sbjct: 471 NKRIEVADIVDGKVLLLSAGKKNKVLVRIA 500


>Medtr4g121070.1 | tyrosyl-tRNA synthetase | HC |
           chr4:50128516-50126504 | 20130731
          Length = 482

 Score =  816 bits (2107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/504 (81%), Positives = 437/504 (86%), Gaps = 26/504 (5%)

Query: 1   MTTTFASRTILSSHPTKLFILPFKPP-SSHFPLRFTRATCTLHSXXXXXXXXXXXNGRSV 59
           M T FASR+I  SH  KLFI PFKPP SS   L F+R TCTL                +V
Sbjct: 1   MATNFASRSIFFSHSAKLFIFPFKPPLSSSSRLPFSRTTCTLQHQQPP----------NV 50

Query: 60  IGILEERGLLESITSDALRSASST---APLRVYCGFDPTAESLHLGNLLGIIVLSWFRRC 116
           IGILE+RGLL+SIT+++LR+ SS    APL+VYCGFDPTA+SLHLGNLL +IVLSWFRR 
Sbjct: 51  IGILEQRGLLDSITNESLRTISSNTINAPLKVYCGFDPTAQSLHLGNLLALIVLSWFRRS 110

Query: 117 GHNVVALIGGATARVGDPSGKSIERPELDVETLERNTLGIGNTIRTILGRAQNLNLEELS 176
           GHNVVALIGGATARVGDPSGKS+ERP+LDV+TLERNT GI NTIRTILGR QN       
Sbjct: 111 GHNVVALIGGATARVGDPSGKSLERPQLDVQTLERNTAGIENTIRTILGRVQN------- 163

Query: 177 VXXXXXXXGNLFDSSVVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRKRLESEQ 236
                   GN  DS VVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRKRLESE 
Sbjct: 164 ----HPNSGNGNDS-VVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRKRLESEH 218

Query: 237 GMSYTEFTYQLLQGYDFLHLFQNEGVSVQIGGSDQWGNITAGTELVRKILQVESAVYGLT 296
           GMSYTEFTYQLLQGYDFL+LFQNEGV+VQIGGSDQWGNITAGTEL+RKILQVE   YGLT
Sbjct: 219 GMSYTEFTYQLLQGYDFLYLFQNEGVNVQIGGSDQWGNITAGTELIRKILQVEGGTYGLT 278

Query: 297 FPLLLKSDGTKFGKSEDGAIWLSPVLLSPYKFYQYFFSVPDADVVRFLKILTFLDIEEIV 356
           FPLLLKSDGTKFGKSEDGAIWL+P +LSPYKFYQYFFSVPDADVVRFLKILTFLDI EIV
Sbjct: 279 FPLLLKSDGTKFGKSEDGAIWLAPSMLSPYKFYQYFFSVPDADVVRFLKILTFLDIYEIV 338

Query: 357 KLEEEMVKPGYAPNTAQRRLAEEVTRFVHGEDGLREALRATEALRPGSETKLDWKTIEGI 416
           KLEEEM +PGY PNTAQRRLAEEVTRFVHGEDGL EALRATEALRPGSETKLDWKTIEGI
Sbjct: 339 KLEEEMKRPGYMPNTAQRRLAEEVTRFVHGEDGLSEALRATEALRPGSETKLDWKTIEGI 398

Query: 417 AEDVPSCSLAYDEVLNQSLVDLSVSSGLFDSKSAARRLLKQGGLYLNNSRVNSENKKIEV 476
           AEDVPSCSLAYDEVLNQSLVDLSVSSGLFDSKSAARRLLKQGG+YLNNSRV+SENK+IE 
Sbjct: 399 AEDVPSCSLAYDEVLNQSLVDLSVSSGLFDSKSAARRLLKQGGVYLNNSRVDSENKRIEA 458

Query: 477 ADIVDGKVLLLSAGKKNKVLVRIA 500
           ADIVDGKVLLLSAGKKNKVLVRIA
Sbjct: 459 ADIVDGKVLLLSAGKKNKVLVRIA 482