Miyakogusa Predicted Gene
- Lj3g3v0461410.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0461410.1 tr|A9RUJ7|A9RUJ7_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_70743
,30.67,3e-19,LEA_2,Late embryogenesis abundant protein, LEA-14;
seg,NULL; LEA14-like,NULL,NODE_43001_length_777_cov_36.882881.path1.1
(192 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g005060.1 | late embryogenesis abundant protein | HC | chr... 275 1e-74
Medtr8g028475.1 | late embryogenesis abundant protein | HC | chr... 114 4e-26
Medtr7g074250.1 | late embryogenesis abundant protein | HC | chr... 107 6e-24
Medtr5g005950.1 | late embryogenesis abundant protein | LC | chr... 81 6e-16
Medtr2g088610.1 | late embryogenesis abundant protein | LC | chr... 77 1e-14
Medtr8g099035.1 | late embryogenesis abundant protein | HC | chr... 67 8e-12
Medtr8g099560.1 | late embryogenesis abundant hydroxyproline-ric... 63 2e-10
Medtr5g009130.1 | late embryogenesis abundant hydroxyproline-ric... 59 3e-09
Medtr4g046830.1 | late embryogenesis abundant hydroxyproline-ric... 59 3e-09
Medtr4g046803.1 | late embryogenesis abundant protein | LC | chr... 55 3e-08
Medtr4g046787.1 | late embryogenesis abundant hydroxyproline-ric... 55 3e-08
Medtr5g009910.1 | late embryogenesis abundant protein | LC | chr... 55 5e-08
Medtr6g086455.1 | late embryogenesis abundant protein | HC | chr... 51 6e-07
Medtr2g088680.1 | late embryogenesis abundant hydroxyproline-ric... 50 9e-07
>Medtr8g005060.1 | late embryogenesis abundant protein | HC |
chr8:28227-29465 | 20130731
Length = 192
Score = 275 bits (704), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/192 (70%), Positives = 151/192 (78%)
Query: 1 MKVGSSKGGKVCXXXXXXXXXXXXXXXXXXXXXFKAKHPVTTVDSMKLEDVDVKLDIAKL 60
MK G+ KG K C FK+KHPVTTV+S+KL D DV LDIAKL
Sbjct: 1 MKAGAGKGRKACLIVTTVFIAIVLLIVILAFTVFKSKHPVTTVNSLKLRDFDVNLDIAKL 60
Query: 61 RVDLNVTLDVNLSVKNPNKVGFKYSDSTAQLNYRGQQIGEVPIPAGEISSDQTKGFNLTL 120
RVDLNVTLDV++SVKNPNKVGFKYS++TA LNYRGQ IGEVPI AG+ISS +TKGFNLTL
Sbjct: 61 RVDLNVTLDVDVSVKNPNKVGFKYSNTTAHLNYRGQLIGEVPISAGDISSGETKGFNLTL 120
Query: 121 TIMADRLLSNSQLFSDVTSGTLPLNTFSRISGKVSIMGFIKVHVVSYTSCDIAVNISNRT 180
T MADRLLSNSQLFSD+TSGTLPLNTF I GKV+I+GFIKVHV+S SCD AVN SN+T
Sbjct: 121 TFMADRLLSNSQLFSDITSGTLPLNTFLTIFGKVNILGFIKVHVISSASCDFAVNTSNKT 180
Query: 181 VGNQECHYKTKL 192
VGNQEC YKTKL
Sbjct: 181 VGNQECQYKTKL 192
>Medtr8g028475.1 | late embryogenesis abundant protein | HC |
chr8:10813944-10812975 | 20130731
Length = 219
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 94/160 (58%), Gaps = 2/160 (1%)
Query: 34 FKAKHPVTTVDSMKLEDVDVKL-DIAKLRVDLNVTLDVNLSVKNPNKVGFKYSDSTAQLN 92
FK K P T + ++L + V L I +V +N+T+ VN+S+KN N K +ST +
Sbjct: 61 FKVKDPKVTTNEIQLTNFGVNLVQIPTPQVKINMTMVVNMSIKNDNIASIKLGNSTTTVY 120
Query: 93 YRGQQIGEVPIPAGEISSDQTKGFNLTLTIMADRLLSNSQLFSDVTSGTLPLNTFSRISG 152
YRG + + IP G + + +T N+T+ +MADRL+S+ L DV G + +NT+S I G
Sbjct: 121 YRGITVADAVIPPGLVKAKKTTRLNVTIEVMADRLVSSPNLLGDVVQGEMVMNTYSIIPG 180
Query: 153 KVSIMGFIKVHVVSYTSCDIAVNISNRTVGNQECHYKTKL 192
+V I+ FIK HV +C + +NIS R + N C +K KL
Sbjct: 181 RVKIL-FIKKHVEMKMNCTMTINISKRGIENMTCTHKVKL 219
>Medtr7g074250.1 | late embryogenesis abundant protein | HC |
chr7:27752015-27750890 | 20130731
Length = 211
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 1/160 (0%)
Query: 34 FKAKHPVTTVDSMKLEDVDVKLDIAKLRVDLNVTLDVNLSVKNPNKVGFKYSDSTAQLNY 93
FK K P T V S LE + +L + + LNVTL++ + V N N FK++D T+ L Y
Sbjct: 52 FKPKDPKTKVVSATLEGISPRLTFPAINIQLNVTLNLKIQVDNQNHASFKHADGTSLLMY 111
Query: 94 RGQQIGEVPIPAGEISSDQTKGFNLTLTIMADRLLSN-SQLFSDVTSGTLPLNTFSRISG 152
+G ++G+ I AG I + + LT+ AD+L SN + L D+ G L L +RI G
Sbjct: 112 KGVEVGDTDIYAGLIPAKGSTILPCRLTLQADKLASNVTGLLGDLMGGQLSLEAVTRIPG 171
Query: 153 KVSIMGFIKVHVVSYTSCDIAVNISNRTVGNQECHYKTKL 192
+V+ +GFIK H+V+ ++C + + +Q C K KL
Sbjct: 172 RVTFLGFIKKHIVAKSNCQFVFGFPDMEIKSQICKNKAKL 211
>Medtr5g005950.1 | late embryogenesis abundant protein | LC |
chr5:688709-688137 | 20130731
Length = 190
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Query: 34 FKAKHPVTTVDSMKLEDVDVKLDIAKLRVDLNVTLDVNLSVKNPNKVGFKYSDSTAQLNY 93
FK K P T+ S+K LDI + +DLN++L + ++V NPN F Y +S+A LNY
Sbjct: 37 FKQKDPTITLQSVKFGRF--HLDILPI-LDLNLSLAILVTVDNPNHGSFTYQNSSAYLNY 93
Query: 94 RGQQIGEVPIPAGEISSDQTKGFNLTLTIMADRLLSNSQLFSDVTSGTLPLNTFSRISGK 153
RG + P+ I + ++ + L + D + L D G + + + + GK
Sbjct: 94 RGNLLATAPLHEDTIPALKSHNISTILNVYVD-VTEVPDLLGDYLGGVINFTSTTTLVGK 152
Query: 154 VSIMGFIKVHVVSYTSCDIAVNISNRTVGNQECHYKTKL 192
V I FIK+ +Y++CDI V I + + N C K K
Sbjct: 153 VKIFNFIKIKATTYSTCDIFVYIHGQ-IANSTCDNKIKF 190
>Medtr2g088610.1 | late embryogenesis abundant protein | LC |
chr2:37362127-37361558 | 20130731
Length = 189
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 46 MKLEDVDVKLDIAKLR-----VDLNVTLDVNLSVKNPNKVGFKYSDSTAQLNYRGQQIGE 100
K +D ++ + A+ + +N+TL + +++ NPN GFKY +S + +NY +G
Sbjct: 32 FKPKDPTIRANFAQFNFLSANITMNMTLGMVITIVNPNYAGFKYQNSISYINYHDTIVGN 91
Query: 101 VPIPAGEISSDQTKGFNLTLTIMADRLLSNSQLFSDVTSGTLPLN--TFSRISGKVSIMG 158
VPI + + + + +M +LL N Q + D+ + +N + + + GK ++
Sbjct: 92 VPIESQLVPARSEINVTTSADLMVGKLLQNPQFWKDMVHNRMIINFTSTTELPGKAILLK 151
Query: 159 FIKVHVVSYTSCDIAVNISNRTVGNQECHYKTKL 192
+IK+ ++Y SCDI+VNI++ + C + KL
Sbjct: 152 YIKLKAITYCSCDISVNITSNG-ADSNCKSRIKL 184
>Medtr8g099035.1 | late embryogenesis abundant protein | HC |
chr8:41563481-41564631 | 20130731
Length = 227
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%)
Query: 65 NVTLDVNLSVKNPNKVGFKYSDSTAQLNYRGQQIGEVPIPAGEISSDQTKGFNLTLTIMA 124
NVT+ ++SVKN N F+Y + Y G IG P G+ + +T FN+TL I A
Sbjct: 99 NVTIHADMSVKNTNSFTFRYGAVNTTVFYNGIDIGGGIQPPGKAKAQRTARFNVTLVINA 158
Query: 125 DRLLSNSQLFSDVTSGTLPLNTFSRISGKVSIMGFIKVHVVSYTSCDIAVNISNRTV 181
+L+ N D+ L +T++RI+GKV I+ K + +C NI ++
Sbjct: 159 KKLVDNQDWIIDIRDQALNFSTYTRINGKVKILNMFKRSIKVELNCTSTYNIPTESI 215
>Medtr8g099560.1 | late embryogenesis abundant hydroxyproline-rich
glycoprotein | HC | chr8:42054323-42053044 | 20130731
Length = 208
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 34 FKAKHPVTTVDSMKLEDVDVKLDIAKLRVDLNVTLDVNLSVKNPNKVGFKYSDSTAQLNY 93
FK + P V++++L V + +N T SV+NPN+ F + DS+ ++ Y
Sbjct: 49 FKPQDPKIAVNAVQLPSFSV------INGTVNFTFSQYASVRNPNRAAFSHYDSSLEILY 102
Query: 94 RGQQIGEVPIPAGEISSDQTKGFNLTLTIMADRLLSNSQLFSDVTSG------------- 140
G Q+G + IPAG+I + +T+ T ++ + L + + + +G
Sbjct: 103 SGNQVGFMFIPAGQIDAGRTQYMAATFSVQSFPLSAPPNMGPTLANGDGVGFNFGLRVQP 162
Query: 141 TLPLNTFSRISGKVSIMGFIKVHVVSYTSCDIAVNISNRTVGNQEC 186
T+ + + ++G+V ++ F V T C +A+ +S+ +V C
Sbjct: 163 TMEIESKLEMAGRVRVLHFFTHRVKVRTGCRVAIAVSDGSVLGFHC 208
>Medtr5g009130.1 | late embryogenesis abundant hydroxyproline-rich
glycoprotein | HC | chr5:2113198-2114071 | 20130731
Length = 187
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 34 FKAKHPVTTVDSMKLEDVDVKLDIAKLRVDLNVTLDVNLSVKNPNKVGFKYSDSTAQLNY 93
FK + P +V +++L ++ +N T SVKNPN+ F + DS+ QL
Sbjct: 41 FKPQDPKISVTAVQLPS----FNLTNNSTTVNFTFSQYTSVKNPNRGTFSHYDSSFQLLS 96
Query: 94 RGQQIGEVPIPAGEISSDQTKGFNLTLTIMADRLLSNSQLFSDVTSGTLPLNTFSRISGK 153
G+QIG + +PAG+I++ +T+ T T+ + L N + T+ + + + G+
Sbjct: 97 YGKQIGFMFVPAGKINARRTQFMAATFTVQSLPL--NLEPEGLQMGPTVEIESTIEMVGR 154
Query: 154 VSIMGFIKVHVVSYTSCDIAVNISNRTVGNQEC 186
V ++ HV + C +A+ +S+ +V C
Sbjct: 155 VRVLHLFSHHVEAKADCRVAIAVSDGSVLGFHC 187
>Medtr4g046830.1 | late embryogenesis abundant hydroxyproline-rich
glycoprotein | HC | chr4:16686688-16687242 | 20130731
Length = 184
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 34 FKAKHPVTTVDSMKLEDVDVKLDIAKLRVDLNVTLDVNLSVKNPNKVGFKYSDSTAQLNY 93
F+AK+PV + + L+ V+ + V L + +SV NPN +K ++T ++Y
Sbjct: 31 FEAKNPVVHLYPVDLDKVEFFTPGVTI-----VNLTMIISVMNPNYGIYKTENTTGFVSY 85
Query: 94 RGQQIGEVPIPAGEISSDQTKGFNLTLTIMADRLLSNSQLFSDVTSGTLPLNTFSRISGK 153
+ + VP+ A + T ++T +M+ +L++N +DV G+ + T + GK
Sbjct: 86 QKTVVAMVPVDAQTLPGHATTNVSVTAGLMSHKLMTNENFVADVGDGSFNMTTRTTFHGK 145
Query: 154 VSIMGFIKVHVVSYTSCDI 172
V ++ IK+ + CDI
Sbjct: 146 VHLLKIIKIKALVNMYCDI 164
>Medtr4g046803.1 | late embryogenesis abundant protein | LC |
chr4:16644485-16645039 | 20130731
Length = 184
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%)
Query: 66 VTLDVNLSVKNPNKVGFKYSDSTAQLNYRGQQIGEVPIPAGEISSDQTKGFNLTLTIMAD 125
V L + +++ NPN +K ++T L+++ + PI ++ S +T T +M +
Sbjct: 59 VPLHLVITIFNPNYGTYKTKNTTGYLSFQDTLVAIAPIGPNKLPSHRTTNVTATAGLMNE 118
Query: 126 RLLSNSQLFSDVTSGTLPLNTFSRISGKVSIMGFIKVHVVSYTSCDIAVNISN 178
+L+SN + DV G+ L + + GKV I KV +CDI NI++
Sbjct: 119 KLISNDKFLVDVAHGSFNLTAKATLRGKVHISKVFKVKATVTINCDIFFNITS 171
>Medtr4g046787.1 | late embryogenesis abundant hydroxyproline-rich
glycoprotein | HC | chr4:16619476-16620137 | 20130731
Length = 184
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 34 FKAKHPVTTVDSMKLEDVDVKLDIAKLRVDLNVTLDVNLSVKNPNKVGFKYSDSTAQLNY 93
FK K+P V + LE+ L + V +V L + +++ NPN +K ++T LNY
Sbjct: 32 FKPKNPDVHVYPIGLEN----LQFLQPNVT-SVPLHMVVTIFNPNYGTYKTKNTTGYLNY 86
Query: 94 RGQQIGEVPIPAGEISSDQTKGFNLTLTIMADRLLSNSQLFSDVTSGTLPLNTFSRISGK 153
+ + PI ++ +T + T +M+ L+SN + DV G+ + GK
Sbjct: 87 QDTLVAIAPIGPKKLPGHRTTNVSATAGLMSVELISNDKFLVDVADGSFNFTAKAIFHGK 146
Query: 154 VSIMGFIKVHVVSYTSCDIAVNISN 178
V + KV + SCDI NI++
Sbjct: 147 VHMSKVFKVKAMVNISCDIFFNITS 171
>Medtr5g009910.1 | late embryogenesis abundant protein | LC |
chr5:2528190-2527621 | 20130731
Length = 189
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 64 LNVTLDVNLSVKNPNKVG-FKYSDSTAQLNYRGQQIGEVPIPAGEISSDQTKGFNLTLTI 122
N T+ S+ NPN G F Y S ++ Y G ++G IP ++S +TK N+T+ +
Sbjct: 64 FNATIITYFSIWNPNYGGIFSYEYSNIKVLYSGVKVGVTKIPNDKVSQRKTKHINVTVDV 123
Query: 123 MADRLL--SNSQLFSDVTSGTLPLNTFSRISGKVSIMGFIKVHVVSYTSCDIAVNISNRT 180
+L+ N + SD+ SG L L ++ + SG V +M +C + +N ++
Sbjct: 124 NFLKLIVNGNEKFSSDIGSGMLNLTSYVKFSGIVQLMKIFHKRKTLEMACIMNLNFTSHA 183
Query: 181 VGNQEC 186
+ C
Sbjct: 184 IQGIHC 189
>Medtr6g086455.1 | late embryogenesis abundant protein | HC |
chr6:32516778-32512401 | 20130731
Length = 262
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 64 LNVTLDVNLSVKNPNKVGFKYSDSTAQLNYRGQQIGEV-PIPAGEISSDQTKGFNLTLTI 122
L+++ + L ++N + Y L YRG++IG V + G+I + + ++ L+I
Sbjct: 108 LDLSFSLKLKIRNRDFFSVAYDKLDVSLGYRGREIGTVSSVGGGKIRARGSDYVDVVLSI 167
Query: 123 MADRLLSNS-QLFSDVTSGTLPLNTFSRISGKVSIMGFIKVHVVSYTSCDIAVNISNRTV 181
A ++ ++ L D+ G + +T S++ GK +GFI + SC++ VNI + V
Sbjct: 168 DAFEVIYDAFYLIEDMVKGVIVFDTVSKVDGK---LGFIPLKAT--VSCEVYVNIYQQMV 222
Query: 182 GNQECH 187
Q C+
Sbjct: 223 VRQNCY 228
>Medtr2g088680.1 | late embryogenesis abundant hydroxyproline-rich
glycoprotein | LC | chr2:37395271-37394711 | 20130731
Length = 186
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 73/147 (49%), Gaps = 12/147 (8%)
Query: 34 FKAKHPVTTVDSMKLEDVDVKLDIAKLRVDLNVTLDVN--LSVKNPNKVGFKYSDSTAQL 91
FK K P V +E VD+ L D+ + ++++ +++ NPN F++ S + +
Sbjct: 32 FKPKDPNIVVH---VEPVDL------LSPDMPIIMNISTLVTIGNPNFGSFEFKKSYSYV 82
Query: 92 NYRGQQIGEVPIPAGEISSDQTKGFNLTLTIMADRLLSNSQLFSDVTSGT-LPLNTFSRI 150
Y +G VPI + + + + + ++L++N + +V G L + +
Sbjct: 83 TYHDTVVGTVPIESQLVPAHSEINVSTYTLMTVNKLINNPDFWKEVVPGYKFTLISKAEF 142
Query: 151 SGKVSIMGFIKVHVVSYTSCDIAVNIS 177
GKV ++ +IK+ +Y +C+I VN++
Sbjct: 143 PGKVIVLKYIKLKGTAYNTCNITVNMA 169