Miyakogusa Predicted Gene

Lj3g3v0461040.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0461040.1 tr|Q75IM4|Q75IM4_ORYSJ Os05g0126200 protein
OS=Oryza sativa subsp. japonica GN=P0683F12.6 PE=2
SV=1,68.18,2e-17,seg,NULL,NODE_10642_length_500_cov_106.054001.path2.1
         (122 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g077440.1 | hypothetical protein | HC | chr8:32861270-3285...   108   1e-24

>Medtr8g077440.1 | hypothetical protein | HC |
           chr8:32861270-32857864 | 20130731
          Length = 252

 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 70/120 (58%), Gaps = 3/120 (2%)

Query: 5   GALRNIIRPXXXXXXXXXXXXXXXNPTIALFSTSL--ASPCKQPQWLFPLRNHFHSLTDT 62
           G L N++RP               + T+  F  SL  +   K PQ+L P  +HFHSLTDT
Sbjct: 78  GVLGNVLRPLISLSSSRTVATSQISSTLP-FHASLQPSFGSKTPQFLLPFLSHFHSLTDT 136

Query: 63  XXXXXXXXXXXXXXXASLRPPGPYAWVQYTPGEPILPNKPNEGSVKRRNEKKRMRQHRAF 122
                          ASLRP GPYAWV++T GE ILPNKPNEGS+KRRNEKKRMRQ RAF
Sbjct: 137 RFPKRRPSDKPRRKRASLRPSGPYAWVEHTTGETILPNKPNEGSIKRRNEKKRMRQRRAF 196