Miyakogusa Predicted Gene

Lj3g3v0429420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0429420.1 Non Characterized Hit- tr|B9T4B3|B9T4B3_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,40.84,4e-17,seg,NULL,CUFF.40758.1
         (259 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0598s0020.1 | hypothetical protein | HC | scaffold0598:7284...    94   1e-19

>Medtr0598s0020.1 | hypothetical protein | HC |
           scaffold0598:7284-7817 | 20130731
          Length = 178

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/141 (42%), Positives = 63/141 (44%), Gaps = 13/141 (9%)

Query: 32  TPNQEDSDFEFGSLTPDSPSCTTSPADHLFFNGRLQXXXXXXXXXXXXXXXXXXXXAATX 91
           TPN+EDSDFEFGSLTPDSPSCTTSPAD LFFNGRLQ                      T 
Sbjct: 29  TPNKEDSDFEFGSLTPDSPSCTTSPADQLFFNGRLQ-----------PHSFPLNNIVITS 77

Query: 92  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLF-HNKVLNNRSTVSGHHFHQPY 150
                                                LF HN +    S        Q Y
Sbjct: 78  RTSSIGSKGSLLSSRSNSTNSTCSSARTSASDSSERRLFIHNNMSKLSSRSVARPVQQSY 137

Query: 151 GCSRRWQYITPVP-ALNRDAS 170
           GCS+RWQYITPVP ALNRD S
Sbjct: 138 GCSQRWQYITPVPAALNRDTS 158