Miyakogusa Predicted Gene

Lj3g3v0429130.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0429130.1 Non Characterized Hit- tr|I1KDR0|I1KDR0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16337 PE,85.33,0,ARM
repeat,Armadillo-type fold; 26S PROTEASOME NON-ATPASE REGULATORY
SUBUNIT 5-RELATED,NULL; no desc,CUFF.40750.1
         (523 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g061280.1 | 26S proteasome non-ATPase regulatory subunit 5...   760   0.0  
Medtr8g058790.1 | 26S proteasome non-ATPase regulatory subunit 5...   760   0.0  

>Medtr8g061280.1 | 26S proteasome non-ATPase regulatory subunit 5 |
           HC | chr8:21093447-21073906 | 20130731
          Length = 526

 Score =  760 bits (1963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/526 (73%), Positives = 420/526 (79%), Gaps = 3/526 (0%)

Query: 1   MDDPS--QLLQAATDFANYPGVQSDDSARDFLNRFPLPLIINALQTQVDVPGLENTLVAC 58
           MD+ S  QLLQAATDFANYPG  SDDSA DFLNRFPLPLIINALQTQ DVPGLE TLV C
Sbjct: 1   MDEQSSQQLLQAATDFANYPGSHSDDSATDFLNRFPLPLIINALQTQFDVPGLETTLVVC 60

Query: 59  LESIFKTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVTCLLDNLDNDHKVAAHLIAE 118
           LE +FKTK GASLIPQYM FVQVGLQ+DSQAVRSLACKTVT LL+NLDN + VAAHLI E
Sbjct: 61  LERLFKTKFGASLIPQYMQFVQVGLQSDSQAVRSLACKTVTSLLENLDNSYTVAAHLIKE 120

Query: 119 FNIYPLLLDCLIKGDEQVAAVAMDAIIKLAAFPEGMGIIFPSVKGGHTDLGIIASQCSSL 178
           FNIYPLLLDCLI G+E+VAA A+DAI KLA+F EG+ IIFPS KGG TDLGIIASQCSSL
Sbjct: 121 FNIYPLLLDCLINGNEEVAAGAIDAIKKLASFSEGLDIIFPSTKGGDTDLGIIASQCSSL 180

Query: 179 GRVRVLALVVKLFSVSRSAASTIYSLNLLKLVEAEIRNADDTXXXXXXXXXXXXXXXXXH 238
           GRVRVLALVVKLFSVS SAAS I SLNLLKL+EAEIR+ DDT                 H
Sbjct: 181 GRVRVLALVVKLFSVSTSAASAICSLNLLKLLEAEIRSTDDTLVTLSVFELLYELAEVEH 240

Query: 239 STEFXXXXXXXXXXXXXXXXXXXXXXXRSRAMMITGRLLSKEIVYSFIDEACVKIVISSI 298
            TEF                       RSRAMMI+GRLLSKE  YSFIDE C K VISSI
Sbjct: 241 GTEFLSKTSLFQLLSSIISDDSKDSILRSRAMMISGRLLSKENTYSFIDEPCAKSVISSI 300

Query: 299 DGRLQSMEPSDRDECETALESLGHIGSSIQGATLLLLGSSPAARHVINAAFDRQGPQGHG 358
           DGRLQS++PS++DE ETALESLG IG +I+GA LLL G+SPAARH I+AAFDRQGP+ HG
Sbjct: 301 DGRLQSLDPSNKDEFETALESLGQIGLTIRGAKLLLSGTSPAARHAIDAAFDRQGPERHG 360

Query: 359 KQLAALHALGNISGEPRTXXXXXXXXXXXXXXRRLVYETASRSSKLTPSGLFLSVLQQDS 418
           +QLAALHALGNISGE R+               RL+YETASRSSKLTPSGLFLSVLQQDS
Sbjct: 361 RQLAALHALGNISGETRSENDVILDAEAEENLLRLLYETASRSSKLTPSGLFLSVLQQDS 420

Query: 419 EIRLAGYRMISGLVARPWCLLEICSRQEIINIVTNPSTETTKIGMEARYNCCKAISKSLT 478
           EIR+AGYRMISGLV+RPWCL+EICSRQEIINIVT+PSTETTKIGMEARYNCC  I+KSLT
Sbjct: 421 EIRIAGYRMISGLVSRPWCLMEICSRQEIINIVTDPSTETTKIGMEARYNCCVRINKSLT 480

Query: 479 LSGRISADPAIAGIATKLQEAVGMGPYL-VRKHVEAQPIVKTAERF 523
            S R+SADPA AGIA KLQEAVG+GPYL  RK VEAQPIV TA+RF
Sbjct: 481 QSSRVSADPAFAGIAAKLQEAVGLGPYLHHRKRVEAQPIVMTADRF 526


>Medtr8g058790.1 | 26S proteasome non-ATPase regulatory subunit 5 |
           HC | chr8:20307115-20287519 | 20130731
          Length = 526

 Score =  760 bits (1963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/526 (73%), Positives = 420/526 (79%), Gaps = 3/526 (0%)

Query: 1   MDDPS--QLLQAATDFANYPGVQSDDSARDFLNRFPLPLIINALQTQVDVPGLENTLVAC 58
           MD+ S  QLLQAATDFANYPG  SDDSA DFLNRFPLPLIINALQTQ DVPGLE TLV C
Sbjct: 1   MDEQSSQQLLQAATDFANYPGSHSDDSATDFLNRFPLPLIINALQTQFDVPGLETTLVVC 60

Query: 59  LESIFKTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVTCLLDNLDNDHKVAAHLIAE 118
           LE +FKTK GASLIPQYM FVQVGLQ+DSQAVRSLACKTVT LL+NLDN + VAAHLI E
Sbjct: 61  LERLFKTKFGASLIPQYMQFVQVGLQSDSQAVRSLACKTVTSLLENLDNSYTVAAHLIKE 120

Query: 119 FNIYPLLLDCLIKGDEQVAAVAMDAIIKLAAFPEGMGIIFPSVKGGHTDLGIIASQCSSL 178
           FNIYPLLLDCLI G+E+VAA A+DAI KLA+F EG+ IIFPS KGG TDLGIIASQCSSL
Sbjct: 121 FNIYPLLLDCLINGNEEVAAGAIDAIKKLASFSEGLDIIFPSTKGGDTDLGIIASQCSSL 180

Query: 179 GRVRVLALVVKLFSVSRSAASTIYSLNLLKLVEAEIRNADDTXXXXXXXXXXXXXXXXXH 238
           GRVRVLALVVKLFSVS SAAS I SLNLLKL+EAEIR+ DDT                 H
Sbjct: 181 GRVRVLALVVKLFSVSTSAASAICSLNLLKLLEAEIRSTDDTLVTLSVFELLYELAEVEH 240

Query: 239 STEFXXXXXXXXXXXXXXXXXXXXXXXRSRAMMITGRLLSKEIVYSFIDEACVKIVISSI 298
            TEF                       RSRAMMI+GRLLSKE  YSFIDE C K VISSI
Sbjct: 241 GTEFLSKTSLFQLLSSIISDDSKDSILRSRAMMISGRLLSKENTYSFIDEPCAKSVISSI 300

Query: 299 DGRLQSMEPSDRDECETALESLGHIGSSIQGATLLLLGSSPAARHVINAAFDRQGPQGHG 358
           DGRLQS++PS++DE ETALESLG IG +I+GA LLL G+SPAARH I+AAFDRQGP+ HG
Sbjct: 301 DGRLQSLDPSNKDEFETALESLGQIGLTIRGAKLLLSGTSPAARHAIDAAFDRQGPERHG 360

Query: 359 KQLAALHALGNISGEPRTXXXXXXXXXXXXXXRRLVYETASRSSKLTPSGLFLSVLQQDS 418
           +QLAALHALGNISGE R+               RL+YETASRSSKLTPSGLFLSVLQQDS
Sbjct: 361 RQLAALHALGNISGETRSENDVILDAEAEENLLRLLYETASRSSKLTPSGLFLSVLQQDS 420

Query: 419 EIRLAGYRMISGLVARPWCLLEICSRQEIINIVTNPSTETTKIGMEARYNCCKAISKSLT 478
           EIR+AGYRMISGLV+RPWCL+EICSRQEIINIVT+PSTETTKIGMEARYNCC  I+KSLT
Sbjct: 421 EIRIAGYRMISGLVSRPWCLMEICSRQEIINIVTDPSTETTKIGMEARYNCCVRINKSLT 480

Query: 479 LSGRISADPAIAGIATKLQEAVGMGPYL-VRKHVEAQPIVKTAERF 523
            S R+SADPA AGIA KLQEAVG+GPYL  RK VEAQPIV TA+RF
Sbjct: 481 QSSRVSADPAFAGIAAKLQEAVGLGPYLHHRKRVEAQPIVMTADRF 526