Miyakogusa Predicted Gene

Lj3g3v0428820.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0428820.2 Non Characterized Hit- tr|I1LSW3|I1LSW3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55833
PE,91.72,0,HOMOGENTISATE 1,2-DIOXYGENASE,NULL; HOMOGENTISATE
1,2-DIOXYGENASE,Homogentisate 1,2-dioxygenase; Hgm,CUFF.40726.2
         (435 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g463280.1 | homogentisate 1,2-dioxygenase | HC | chr8:2227...   826   0.0  
Medtr8g463280.2 | homogentisate 1,2-dioxygenase | HC | chr8:2227...   600   e-172

>Medtr8g463280.1 | homogentisate 1,2-dioxygenase | HC |
           chr8:22275980-22281458 | 20130731
          Length = 451

 Score =  826 bits (2134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/435 (89%), Positives = 414/435 (95%)

Query: 1   MEHSTAGDDFNYLSGFGNHFSSEALAGALPEAQNSPLICPYGLYAEQISGTSFTSPRNLN 60
           M++S +GDDFNY SGFGNHFSSEA+ GALP  QNSPLICP+GLYAEQISGTSFT+PR+LN
Sbjct: 1   MDNSISGDDFNYQSGFGNHFSSEAITGALPVEQNSPLICPFGLYAEQISGTSFTTPRSLN 60

Query: 61  LFSWFYRVKPSVTHEPFKPRVPCNGRILSEFNHSNSSTNPTQLRWKPMDSPDSPTDFIDG 120
           LFSW YR+KPSVTHEPFK RVP N +ILSEFN SNSSTNPTQLRWKP D PDSPTDFIDG
Sbjct: 61  LFSWLYRIKPSVTHEPFKARVPSNKKILSEFNDSNSSTNPTQLRWKPTDIPDSPTDFIDG 120

Query: 121 LSTVCGSGSSFMRHGYAIHMYTANKSMNNCAFCNADGDFLIVPQQGRLFITTECGRLKVS 180
           L TVCGSGSSFMRHGYAIHMYTANKSM+NCAFCNADGDFLIVPQQGRLFITTECGRL VS
Sbjct: 121 LFTVCGSGSSFMRHGYAIHMYTANKSMDNCAFCNADGDFLIVPQQGRLFITTECGRLNVS 180

Query: 181 PGEIAMLPQGFRFTVDLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWF 240
           PG++A++PQGFRF V+LPDGPSRGYVAE+FGTHFQLPDLGPIGANGLA+PRDFL PTAWF
Sbjct: 181 PGDVAIIPQGFRFNVNLPDGPSRGYVAEVFGTHFQLPDLGPIGANGLASPRDFLAPTAWF 240

Query: 241 EDKSYPGYTIVQKFGGELFSAVQDFSPFNVVAWRGNYVPYKYDLSKFCPYNTVLFDHSDP 300
           EDKSYPGYTIVQKFGGELF+A+QDFSPFNVVAW GNYVPYKYDLSKFCPYNTVL+DHSDP
Sbjct: 241 EDKSYPGYTIVQKFGGELFTAIQDFSPFNVVAWHGNYVPYKYDLSKFCPYNTVLYDHSDP 300

Query: 301 SINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGGYEAKVD 360
           SINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHG YEAKVD
Sbjct: 301 SINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGNYEAKVD 360

Query: 361 GFLPGGASLHSCMTPHGPDTKSYEATIARGNDVGPNKITDTMAFMFESCLIPRISRWALE 420
           GFLPGGASLH+CMTPHGPDTKSYE+TIARGN+VGP+KI DTMAFMFES LIPRIS+ ALE
Sbjct: 361 GFLPGGASLHNCMTPHGPDTKSYESTIARGNNVGPHKIIDTMAFMFESSLIPRISQSALE 420

Query: 421 SPFLDHDYYQCWIGL 435
           SPFLDHDYYQCWIGL
Sbjct: 421 SPFLDHDYYQCWIGL 435


>Medtr8g463280.2 | homogentisate 1,2-dioxygenase | HC |
           chr8:22276473-22281444 | 20130731
          Length = 320

 Score =  600 bits (1547), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 280/304 (92%), Positives = 296/304 (97%)

Query: 132 MRHGYAIHMYTANKSMNNCAFCNADGDFLIVPQQGRLFITTECGRLKVSPGEIAMLPQGF 191
           MRHGYAIHMYTANKSM+NCAFCNADGDFLIVPQQGRLFITTECGRL VSPG++A++PQGF
Sbjct: 1   MRHGYAIHMYTANKSMDNCAFCNADGDFLIVPQQGRLFITTECGRLNVSPGDVAIIPQGF 60

Query: 192 RFTVDLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEDKSYPGYTIV 251
           RF V+LPDGPSRGYVAE+FGTHFQLPDLGPIGANGLA+PRDFL PTAWFEDKSYPGYTIV
Sbjct: 61  RFNVNLPDGPSRGYVAEVFGTHFQLPDLGPIGANGLASPRDFLAPTAWFEDKSYPGYTIV 120

Query: 252 QKFGGELFSAVQDFSPFNVVAWRGNYVPYKYDLSKFCPYNTVLFDHSDPSINTVLTAPTD 311
           QKFGGELF+A+QDFSPFNVVAW GNYVPYKYDLSKFCPYNTVL+DHSDPSINTVLTAPTD
Sbjct: 121 QKFGGELFTAIQDFSPFNVVAWHGNYVPYKYDLSKFCPYNTVLYDHSDPSINTVLTAPTD 180

Query: 312 KPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGGYEAKVDGFLPGGASLHS 371
           KPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHG YEAKVDGFLPGGASLH+
Sbjct: 181 KPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGNYEAKVDGFLPGGASLHN 240

Query: 372 CMTPHGPDTKSYEATIARGNDVGPNKITDTMAFMFESCLIPRISRWALESPFLDHDYYQC 431
           CMTPHGPDTKSYE+TIARGN+VGP+KI DTMAFMFES LIPRIS+ ALESPFLDHDYYQC
Sbjct: 241 CMTPHGPDTKSYESTIARGNNVGPHKIIDTMAFMFESSLIPRISQSALESPFLDHDYYQC 300

Query: 432 WIGL 435
           WIGL
Sbjct: 301 WIGL 304