Miyakogusa Predicted Gene

Lj3g3v0428820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0428820.1 Non Characterized Hit- tr|I1LSW3|I1LSW3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55833
PE,91.35,0,RmlC-like cupins,RmlC-like cupin domain; HgmA,Homogentisate
1,2-dioxygenase; HOMOGENTISATE 1,2-DIOXY,CUFF.40726.1
         (278 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g463280.1 | homogentisate 1,2-dioxygenase | HC | chr8:2227...   506   e-144
Medtr8g463280.2 | homogentisate 1,2-dioxygenase | HC | chr8:2227...   504   e-143

>Medtr8g463280.1 | homogentisate 1,2-dioxygenase | HC |
           chr8:22275980-22281458 | 20130731
          Length = 451

 Score =  506 bits (1303), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 236/259 (91%), Positives = 250/259 (96%)

Query: 1   MLPQGFRFTVDLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEDKSY 60
           ++PQGFRF V+LPDGPSRGYVAE+FGTHFQLPDLGPIGANGLA+PRDFL PTAWFEDKSY
Sbjct: 186 IIPQGFRFNVNLPDGPSRGYVAEVFGTHFQLPDLGPIGANGLASPRDFLAPTAWFEDKSY 245

Query: 61  PGYTIVQKFGGELFSAVQDFSPFNVVAWRGNYVPYKYDLSKFCPYNTVLFDHSDPSINTV 120
           PGYTIVQKFGGELF+A+QDFSPFNVVAW GNYVPYKYDLSKFCPYNTVL+DHSDPSINTV
Sbjct: 246 PGYTIVQKFGGELFTAIQDFSPFNVVAWHGNYVPYKYDLSKFCPYNTVLYDHSDPSINTV 305

Query: 121 LTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGGYEAKVDGFLPG 180
           LTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHG YEAKVDGFLPG
Sbjct: 306 LTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGNYEAKVDGFLPG 365

Query: 181 GASLHSCMTPHGPDTKSYEATIARGNDVGPNKITDTMAFMFESCLIPRISRWALESPFLD 240
           GASLH+CMTPHGPDTKSYE+TIARGN+VGP+KI DTMAFMFES LIPRIS+ ALESPFLD
Sbjct: 366 GASLHNCMTPHGPDTKSYESTIARGNNVGPHKIIDTMAFMFESSLIPRISQSALESPFLD 425

Query: 241 HDYYQCWIGLRSHFNVTEI 259
           HDYYQCWIGLRSHF V E+
Sbjct: 426 HDYYQCWIGLRSHFTVPEL 444


>Medtr8g463280.2 | homogentisate 1,2-dioxygenase | HC |
           chr8:22276473-22281444 | 20130731
          Length = 320

 Score =  504 bits (1299), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 236/260 (90%), Positives = 250/260 (96%)

Query: 1   MLPQGFRFTVDLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEDKSY 60
           ++PQGFRF V+LPDGPSRGYVAE+FGTHFQLPDLGPIGANGLA+PRDFL PTAWFEDKSY
Sbjct: 55  IIPQGFRFNVNLPDGPSRGYVAEVFGTHFQLPDLGPIGANGLASPRDFLAPTAWFEDKSY 114

Query: 61  PGYTIVQKFGGELFSAVQDFSPFNVVAWRGNYVPYKYDLSKFCPYNTVLFDHSDPSINTV 120
           PGYTIVQKFGGELF+A+QDFSPFNVVAW GNYVPYKYDLSKFCPYNTVL+DHSDPSINTV
Sbjct: 115 PGYTIVQKFGGELFTAIQDFSPFNVVAWHGNYVPYKYDLSKFCPYNTVLYDHSDPSINTV 174

Query: 121 LTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGGYEAKVDGFLPG 180
           LTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHG YEAKVDGFLPG
Sbjct: 175 LTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGNYEAKVDGFLPG 234

Query: 181 GASLHSCMTPHGPDTKSYEATIARGNDVGPNKITDTMAFMFESCLIPRISRWALESPFLD 240
           GASLH+CMTPHGPDTKSYE+TIARGN+VGP+KI DTMAFMFES LIPRIS+ ALESPFLD
Sbjct: 235 GASLHNCMTPHGPDTKSYESTIARGNNVGPHKIIDTMAFMFESSLIPRISQSALESPFLD 294

Query: 241 HDYYQCWIGLRSHFNVTEIS 260
           HDYYQCWIGLRSHF V E+ 
Sbjct: 295 HDYYQCWIGLRSHFTVPELK 314