Miyakogusa Predicted Gene

Lj3g3v0428780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0428780.1 Non Characterized Hit- tr|I1M332|I1M332_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8588
PE=,92.59,0,TNC18_HUMAN ISOFORM 2 OF O15417 - HOMO SAPIENS (HUMAN)
SOURCE:UNIPROTKB/SPLICEV,NULL; PHD FINGER TR,CUFF.40766.1
         (216 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g078310.1 | PHD finger and bromo-adjacent-like domain prot...   404   e-113
Medtr3g117270.1 | PHD finger and bromo-adjacent-like domain prot...   311   2e-85
Medtr3g117270.3 | PHD finger and bromo-adjacent-like domain prot...   301   2e-82
Medtr3g117270.4 | PHD finger and bromo-adjacent-like domain prot...   261   4e-70
Medtr3g117270.2 | PHD finger and bromo-adjacent-like domain prot...   257   7e-69
Medtr2g090365.1 | PHD finger and bromo-adjacent-like domain prot...   241   3e-64
Medtr3g117280.1 | PHD finger and bromo-adjacent-like domain prot...   233   1e-61
Medtr5g097190.1 | DnaK family protein | LC | chr5:42551479-42556...   117   7e-27
Medtr5g010190.2 | bromo-adjacent-like (BAH) domain protein | HC ...    54   9e-08
Medtr5g010190.1 | bromo-adjacent-like (BAH) domain protein | HC ...    54   9e-08
Medtr8g098260.1 | transcription factor S-II, central domain prot...    52   4e-07
Medtr6g464540.1 | bromo-adjacent-like (BAH) domain protein | HC ...    52   4e-07
Medtr8g098290.2 | bromo-adjacent-like (BAH) domain protein | HC ...    51   9e-07
Medtr8g098290.1 | bromo-adjacent-like (BAH) domain protein | HC ...    51   9e-07
Medtr8g099640.1 | origin recognition complex subunit 1 | HC | ch...    49   3e-06

>Medtr2g078310.1 | PHD finger and bromo-adjacent-like domain protein
           | HC | chr2:32595275-32591772 | 20130731
          Length = 218

 Score =  404 bits (1037), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/216 (93%), Positives = 209/216 (96%)

Query: 1   MAKTRPGKKDVDSYTIRGTNKVVKAGDCVLMRPSDTSKPPYVARVEKIEQDNRSNVRVRV 60
           MAKTRPGKKD+DSYTIRGTNKVVKAGDCVLMRPSDTSKPPYVARVEKIEQDNR+NVRVRV
Sbjct: 1   MAKTRPGKKDMDSYTIRGTNKVVKAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVRVRV 60

Query: 61  RWYYRPEESIGGRRQFHGVKELFLSDHLDVQSAHTIEGKCIVHSFKNYTKLEHVGAEDYY 120
           RWYYRPEESIGGRRQFHG KELFLSDH DVQSAHTIEGKCIVHSFKNYTKLE+VG+EDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHSFKNYTKLENVGSEDYY 120

Query: 121 CRFDYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLEH 180
           CRF+YKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKL+H
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 180

Query: 181 FMCSECSSDDDVKKPHATFSASPGSDIKVEPKRRKR 216
           F+CSECSSDDD+KKP A F  SPGSD KVEPKRRKR
Sbjct: 181 FVCSECSSDDDLKKPQAAFPVSPGSDGKVEPKRRKR 216


>Medtr3g117270.1 | PHD finger and bromo-adjacent-like domain protein
           | HC | chr3:54853329-54857739 | 20130731
          Length = 218

 Score =  311 bits (798), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 145/219 (66%), Positives = 180/219 (82%), Gaps = 4/219 (1%)

Query: 1   MAKTRPGKKDVDSYTIRGTNK--VVKAGDCVLMRPSDTSKPPYVARVEKIEQDNR-SNVR 57
           MAK +  K++++SY+++  NK   +KAGDCVLMRPSD SKP YVA++E IE D+R +NV+
Sbjct: 1   MAKPKAPKRNLESYSVKHMNKSVTIKAGDCVLMRPSDPSKPSYVAKIEGIEADSRGANVK 60

Query: 58  VRVRWYYRPEESIGGRRQFHGVKELFLSDHLDVQSAHTIEGKCIVHSFKNYTKLEHVGAE 117
           V VRWYYRPEESIGGRRQFHG KELFLSDH DVQSA TIEGKC+VH FK+YTKL+ VG +
Sbjct: 61  VNVRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCVVHGFKSYTKLDAVGND 120

Query: 118 DYYCRFDYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKK 177
           D++CRF+Y +ATGAF PDRVAVYCKCEMPYNPDDLMVQCEGC DW+HPAC+ MT+EEA++
Sbjct: 121 DFFCRFEYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIDMTVEEAER 180

Query: 178 LEHFMCSECSSDDDVKKPHATFSASPGSDIKVEPKRRKR 216
           L+HF C  CS +   K+   + SA+  +D KV+ KRR+R
Sbjct: 181 LDHFFCESCSVEGQ-KQLQNSHSATRLADTKVDTKRRRR 218


>Medtr3g117270.3 | PHD finger and bromo-adjacent-like domain protein
           | HC | chr3:54853329-54857095 | 20130731
          Length = 211

 Score =  301 bits (772), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 140/212 (66%), Positives = 173/212 (81%), Gaps = 4/212 (1%)

Query: 1   MAKTRPGKKDVDSYTIRGTNK--VVKAGDCVLMRPSDTSKPPYVARVEKIEQDNR-SNVR 57
           MAK +  K++++SY+++  NK   +KAGDCVLMRPSD SKP YVA++E IE D+R +NV+
Sbjct: 1   MAKPKAPKRNLESYSVKHMNKSVTIKAGDCVLMRPSDPSKPSYVAKIEGIEADSRGANVK 60

Query: 58  VRVRWYYRPEESIGGRRQFHGVKELFLSDHLDVQSAHTIEGKCIVHSFKNYTKLEHVGAE 117
           V VRWYYRPEESIGGRRQFHG KELFLSDH DVQSA TIEGKC+VH FK+YTKL+ VG +
Sbjct: 61  VNVRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCVVHGFKSYTKLDAVGND 120

Query: 118 DYYCRFDYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKK 177
           D++CRF+Y +ATGAF PDRVAVYCKCEMPYNPDDLMVQCEGC DW+HPAC+ MT+EEA++
Sbjct: 121 DFFCRFEYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIDMTVEEAER 180

Query: 178 LEHFMCSECSSDDDVKKPHATFSASPGSDIKV 209
           L+HF C  CS +   K+   + SA+  +D K 
Sbjct: 181 LDHFFCESCSVEGQ-KQLQNSHSATRLADTKA 211


>Medtr3g117270.4 | PHD finger and bromo-adjacent-like domain protein
           | HC | chr3:54853329-54857739 | 20130731
          Length = 165

 Score =  261 bits (666), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 120/165 (72%), Positives = 142/165 (86%), Gaps = 3/165 (1%)

Query: 1   MAKTRPGKKDVDSYTIRGTNK--VVKAGDCVLMRPSDTSKPPYVARVEKIEQDNR-SNVR 57
           MAK +  K++++SY+++  NK   +KAGDCVLMRPSD SKP YVA++E IE D+R +NV+
Sbjct: 1   MAKPKAPKRNLESYSVKHMNKSVTIKAGDCVLMRPSDPSKPSYVAKIEGIEADSRGANVK 60

Query: 58  VRVRWYYRPEESIGGRRQFHGVKELFLSDHLDVQSAHTIEGKCIVHSFKNYTKLEHVGAE 117
           V VRWYYRPEESIGGRRQFHG KELFLSDH DVQSA TIEGKC+VH FK+YTKL+ VG +
Sbjct: 61  VNVRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCVVHGFKSYTKLDAVGND 120

Query: 118 DYYCRFDYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDW 162
           D++CRF+Y +ATGAF PDRVAVYCKCEMPYNPDDLMVQCEGC DW
Sbjct: 121 DFFCRFEYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDW 165


>Medtr3g117270.2 | PHD finger and bromo-adjacent-like domain protein
           | HC | chr3:54853383-54857559 | 20130731
          Length = 164

 Score =  257 bits (656), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 119/164 (72%), Positives = 141/164 (85%), Gaps = 3/164 (1%)

Query: 1   MAKTRPGKKDVDSYTIRGTNK--VVKAGDCVLMRPSDTSKPPYVARVEKIEQDNR-SNVR 57
           MAK +  K++++SY+++  NK   +KAGDCVLMRPSD SKP YVA++E IE D+R +NV+
Sbjct: 1   MAKPKAPKRNLESYSVKHMNKSVTIKAGDCVLMRPSDPSKPSYVAKIEGIEADSRGANVK 60

Query: 58  VRVRWYYRPEESIGGRRQFHGVKELFLSDHLDVQSAHTIEGKCIVHSFKNYTKLEHVGAE 117
           V VRWYYRPEESIGGRRQFHG KELFLSDH DVQSA TIEGKC+VH FK+YTKL+ VG +
Sbjct: 61  VNVRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCVVHGFKSYTKLDAVGND 120

Query: 118 DYYCRFDYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKD 161
           D++CRF+Y +ATGAF PDRVAVYCKCEMPYNPDDLMVQCEGC D
Sbjct: 121 DFFCRFEYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSD 164


>Medtr2g090365.1 | PHD finger and bromo-adjacent-like domain
           protein, putative | HC | chr2:38471494-38475361 |
           20130731
          Length = 453

 Score =  241 bits (616), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 123/191 (64%), Positives = 139/191 (72%), Gaps = 5/191 (2%)

Query: 1   MAKTRPGKKDVDSYTIRGTNKVVKAGDCVLMRPSDTSKPPYVARVEKIEQDNRSNVRVRV 60
           M  TR GK++   YTIRGT+ VV+A DCVL+R +D  KP  +ARVEK EQDN + +RV V
Sbjct: 263 MGTTRQGKRN--KYTIRGTDTVVRAKDCVLLRRTDAIKP-IIARVEKFEQDNMNRMRVYV 319

Query: 61  RWYYRPEESIGGRRQFHGVKELFLSDHLDVQSAHTIEGKCIVHSFKNYTKLEHVGAEDYY 120
           R YYRPEE+I GR  FHG KELFLS+H DV SA TIEGKC VH+ KNY KLE VGA DYY
Sbjct: 320 RKYYRPEETIEGRVCFHGDKELFLSNHYDVHSADTIEGKCFVHNLKNYMKLEVVGANDYY 379

Query: 121 CRFDYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLE- 179
            RF Y A TGA TP+RV V CKCEMPYNPD LMV C  C + YHP CVGM  EEA K E 
Sbjct: 380 SRFWYNAFTGAMTPERVEVLCKCEMPYNPDRLMVLCGSCNERYHPKCVGMPFEEAMKSED 439

Query: 180 -HFMCSECSSD 189
             F+CS+CS D
Sbjct: 440 FRFVCSKCSPD 450


>Medtr3g117280.1 | PHD finger and bromo-adjacent-like domain protein
           | HC | chr3:54859053-54862407 | 20130731
          Length = 196

 Score =  233 bits (593), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 111/199 (55%), Positives = 142/199 (71%), Gaps = 4/199 (2%)

Query: 18  GTNKVVKAGDCVLMRPSDTSKPPYVARVEKIEQDNRSNVRVRVRWYYRPEESIGGRRQFH 77
            ++   + GDCV MR S    P YVA +E+++ D+R    VRVRWYY PEE+  GRR FH
Sbjct: 2   NSDMSFREGDCVRMRSSKPLIPTYVAIIEEMKADSRD---VRVRWYYWPEETKKGRRHFH 58

Query: 78  GVKELFLSDHLDVQSAHTIEGKCIVHSFKNYTKLEHVGAEDYYCRFDYKAATGAFTPDRV 137
           G KEL LSDH DVQS  TIEGKC VHS K Y KL+ VG +D++CRF+Y +ATGA TPD V
Sbjct: 59  GSKELILSDHFDVQSVDTIEGKCTVHSLKKYMKLDVVGDDDFFCRFNYNSATGALTPDIV 118

Query: 138 AVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLEHFMCSECSSDDDVKKPHA 197
            VYCKCEMPYNPD++MVQC+ C DW+HPAC+ MT+EEA+++++F C  CS +   KK   
Sbjct: 119 QVYCKCEMPYNPDEVMVQCDHCTDWFHPACIDMTVEEAERIDNFSCESCSLEVQ-KKLRG 177

Query: 198 TFSASPGSDIKVEPKRRKR 216
           + SA+   D  V+ KRR+R
Sbjct: 178 SHSATRLPDTNVDTKRRQR 196


>Medtr5g097190.1 | DnaK family protein | LC | chr5:42551479-42556009
           | 20130731
          Length = 368

 Score =  117 bits (293), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 61/129 (47%), Positives = 81/129 (62%), Gaps = 10/129 (7%)

Query: 71  GGRRQFHGVKELFLSDHLDVQSAHTIEGKCIVHSFKNYTKL---EHVGAEDYYCRFDYKA 127
            G + F G  ELF S   +VQS  TI  KC VH+FK+Y  L   ++VG  D+YCR+ Y  
Sbjct: 15  AGDKDFIGEDELFYSSVREVQSVKTIISKCFVHTFKDYLNLCDLQNVGYLDFYCRYKYDP 74

Query: 128 ATGA-FTPD----RVAVYCKCEMPYNPDDLMVQCEG-CKDWYHPACVGMTIEEAKKLEHF 181
            TG  F P+    RV  +CKCE+P NPD  M+QCEG CK WYHP C+ MT E+A+ ++ F
Sbjct: 75  DTGTIFVPNSTTQRVVAHCKCELPRNPDYFMIQCEGRCKKWYHPPCLEMTEEQARLMKPF 134

Query: 182 MCS-ECSSD 189
           +C+ +C  D
Sbjct: 135 LCTADCKQD 143


>Medtr5g010190.2 | bromo-adjacent-like (BAH) domain protein | HC |
           chr5:2667413-2662178 | 20130731
          Length = 462

 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 5/105 (4%)

Query: 2   AKTRPGKKDVDSYTIRGTNKVVKAGDCVLMRPSDTSKPPYVARVEKIEQDNRSNVRVRVR 61
            K R  K+  +S+   G    ++  D V++ P D  + PYVA ++ I Q    ++ V  +
Sbjct: 81  GKGRGRKRHYESFEFDGNQYSLE--DPVMLVPEDKEQKPYVAIIKDIIQYFSGSIMVAGQ 138

Query: 62  WYYRPEESI---GGRRQFHGVKELFLSDHLDVQSAHTIEGKCIVH 103
           W+YRPEE+    GG  +    +ELF S H D   A ++  KC+VH
Sbjct: 139 WFYRPEEAEKKGGGSWKSCDTRELFYSFHRDEVPAESVMHKCVVH 183


>Medtr5g010190.1 | bromo-adjacent-like (BAH) domain protein | HC |
           chr5:2667413-2662178 | 20130731
          Length = 596

 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 5/105 (4%)

Query: 2   AKTRPGKKDVDSYTIRGTNKVVKAGDCVLMRPSDTSKPPYVARVEKIEQDNRSNVRVRVR 61
            K R  K+  +S+   G    ++  D V++ P D  + PYVA ++ I Q    ++ V  +
Sbjct: 81  GKGRGRKRHYESFEFDGNQYSLE--DPVMLVPEDKEQKPYVAIIKDIIQYFSGSIMVAGQ 138

Query: 62  WYYRPEESI---GGRRQFHGVKELFLSDHLDVQSAHTIEGKCIVH 103
           W+YRPEE+    GG  +    +ELF S H D   A ++  KC+VH
Sbjct: 139 WFYRPEEAEKKGGGSWKSCDTRELFYSFHRDEVPAESVMHKCVVH 183


>Medtr8g098260.1 | transcription factor S-II, central domain protein
           | LC | chr8:40956492-40966975 | 20130731
          Length = 1301

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 8/106 (7%)

Query: 4   TRPGKKDVD---SYTIRGTNKVVKAGDCVLMRPSDTSKPPYVARVEKIEQDNRSNVRVRV 60
           +R GK  ++   S+   G    ++  D VL+ P    +  YVA ++ I Q     + +  
Sbjct: 61  SRRGKNKINHFHSFEFDGNQYTLE--DTVLLEPDGKDEKAYVAIIKDITQSPNDTLMITG 118

Query: 61  RWYYRP---EESIGGRRQFHGVKELFLSDHLDVQSAHTIEGKCIVH 103
           +W+YRP   E+  GG  Q +  +EL+ S H D   A +++  C+VH
Sbjct: 119 QWFYRPYEAEKKGGGTWQSNETRELYYSFHQDAVPAESVKHTCVVH 164


>Medtr6g464540.1 | bromo-adjacent-like (BAH) domain protein | HC |
           chr6:22509641-22507190 | 20130731
          Length = 360

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 9/113 (7%)

Query: 4   TRPGKKDVDSYTIRGTNKVVKAGDCVLMRPSDTSKPPYVARVEKIEQDNRSNVRVRVRWY 63
           ++ G+K   S+ +      ++  D VL+ P    K P+VA ++ IEQ  + N+++    +
Sbjct: 60  SKNGRKHFQSFELDKNRYTLE--DTVLLAPETQDKKPFVAIIKDIEQSLKGNLKITTHLF 117

Query: 64  YRPEESIGGRRQFHGVK-----ELFLSDHLDVQSAHTIEGKCIVHSFKNYTKL 111
           YRP+E    RR+ H  K     ELF S H  V  A  +   C VH    + KL
Sbjct: 118 YRPDE--AERRRGHTWKSKIKRELFYSFHQYVVPAENVMHTCAVHFIPVHKKL 168


>Medtr8g098290.2 | bromo-adjacent-like (BAH) domain protein | HC |
           chr8:40943322-40947559 | 20130731
          Length = 447

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 27  DCVLMRPSDTSKPPYVARVEKIEQDNRSNVRVRV--RWYYRPEESI---GGRRQFHGVKE 81
           D VL+ P    + PYVA ++ I Q    N  + +  +W+YRP+E+    GG  Q    +E
Sbjct: 107 DPVLLVPEVKDQKPYVAIIKDITQSINGNGSLMITGQWFYRPDEAEKKGGGSWQSVDTRE 166

Query: 82  LFLSDHLDVQSAHTIEGKCIVH 103
           LF S H D   A ++  KC+VH
Sbjct: 167 LFYSFHRDEVPAESVMHKCVVH 188


>Medtr8g098290.1 | bromo-adjacent-like (BAH) domain protein | HC |
           chr8:40943275-40948326 | 20130731
          Length = 579

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 27  DCVLMRPSDTSKPPYVARVEKIEQDNRSNVRVRV--RWYYRPEESI---GGRRQFHGVKE 81
           D VL+ P    + PYVA ++ I Q    N  + +  +W+YRP+E+    GG  Q    +E
Sbjct: 107 DPVLLVPEVKDQKPYVAIIKDITQSINGNGSLMITGQWFYRPDEAEKKGGGSWQSVDTRE 166

Query: 82  LFLSDHLDVQSAHTIEGKCIVH 103
           LF S H D   A ++  KC+VH
Sbjct: 167 LFYSFHRDEVPAESVMHKCVVH 188


>Medtr8g099640.1 | origin recognition complex subunit 1 | HC |
           chr8:42142602-42133661 | 20130731
          Length = 891

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 49/102 (48%)

Query: 31  MRPSDTSKPPYVARVEKIEQDNRSNVRVRVRWYYRPEESIGGRRQFHGVKELFLSDHLDV 90
           MR    S   + AR+E I ++   +   RVRWY  PEE+  GR+  +  +EL+ ++ L  
Sbjct: 301 MRQRLQSSDLWAARIESIWKEVDGSYWCRVRWYMIPEETSVGRQPHNLSRELYRTNDLAK 360

Query: 91  QSAHTIEGKCIVHSFKNYTKLEHVGAEDYYCRFDYKAATGAF 132
               ++   C V   K Y K  + G + + C ++Y     +F
Sbjct: 361 IEMESVLRHCYVMIPKEYAKASNEGDDVFLCEYEYDIQWHSF 402