Miyakogusa Predicted Gene

Lj3g3v0428490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0428490.1 Non Characterized Hit- tr|G5DWT5|G5DWT5_SILLA
Putative uncharacterized protein (Fragment) OS=Silene
,39.85,1e-18,seg,NULL; coiled-coil,NULL,CUFF.40702.1
         (437 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g464010.1 | hypothetical protein | HC | chr8:22600722-2259...   390   e-108
Medtr7g117530.1 | NUMOD3 motif protein | HC | chr7:48689940-4868...   103   3e-22
Medtr7g117530.2 | NUMOD3 motif protein | HC | chr7:48689904-4868...    55   9e-08
Medtr7g117530.3 | NUMOD3 motif protein | HC | chr7:48689940-4868...    54   3e-07

>Medtr8g464010.1 | hypothetical protein | HC |
           chr8:22600722-22596106 | 20130731
          Length = 402

 Score =  390 bits (1001), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 217/439 (49%), Positives = 266/439 (60%), Gaps = 39/439 (8%)

Query: 1   MLYFNSLGRSIPHLHSPMTHVSTT--DSRLLLTNVVGCACTFCPPTTLQVKTATPRLVFV 58
           MLYFNS+ R +   H+P+TH+       + LL+N + CACTF PPT        P+    
Sbjct: 1   MLYFNSIVRGMSVPHTPLTHIPNNYYSRQQLLSNRLDCACTFSPPTI-------PKST-- 51

Query: 59  CSLQRVLSIEELQINVDDDSDNQSETSVDSSDYLNGGDGVVGLSDSLEIESLSRKAVKER 118
                      L  +VD +  N  +   DS DYLN  D +             +   KER
Sbjct: 52  -----------LSFSVDAEHHNVEQ---DSFDYLNNVDSL-------------KSNDKER 84

Query: 119 MRRFKIGLANKGRVPWNKGRKHSAETRERIKRRTSEALREPKVRKKMAEHPRFHSDKIKE 178
           MRR +IGLANKGRVPWNKGR+H+AETRERI+ RT EAL++PKV+KKMAEHPR HSD+IKE
Sbjct: 85  MRRMRIGLANKGRVPWNKGRQHTAETRERIRMRTLEALKDPKVKKKMAEHPRCHSDQIKE 144

Query: 179 KISYSLRRVWQERLKSKRFREQIFLSWEQCIANAAKKGGCGQEELDWDSYNKIXXXXXXX 238
           KISYSLRRVW+ERLKSKR  EQ FL WEQ IANAAKKGG GQ+ELDWDSY+KI       
Sbjct: 145 KISYSLRRVWEERLKSKRAGEQFFLLWEQNIANAAKKGGSGQDELDWDSYDKIKEQLEFH 204

Query: 239 XXXXXXXXXXXXXMAIARAEKFIQSWSECLXXXXXXXXXXXXXLDWDSYEKIQEEMFLLN 298
                        MAI  A KF   W+E +             LDWDSYEKI+EEM LLN
Sbjct: 205 RILQAEEKEKEKLMAIVGANKFFHLWTEIIAKAAKKGGSGEEELDWDSYEKIKEEMILLN 264

Query: 299 QIXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMLNQKKKDLRERIKGRGNIKSQLCKNANE 358
           Q+                            VML QK+KDLRER K R NIK+Q  KNA E
Sbjct: 265 QLQRITEKAKAKEMAKIKAEKEAQIKAIKKVMLTQKRKDLRERTKARENIKNQPYKNAEE 324

Query: 359 DGEAALEITQQFKLDTKLTKINISKNINSEVAREGGFSNSIYPTYNKLDLEVIKREKLRK 418
           D + A ++TQ+FKL +KLTK +++  I SEVAREG    S +PT+ KLDLE+I+REK++K
Sbjct: 325 D-KCAEDVTQEFKLGSKLTKNHVNNIIRSEVAREGDVIYSNFPTHGKLDLELIRREKMQK 383

Query: 419 EASFADRIQAARLKKGNLH 437
           + S AD+IQAA++ KG LH
Sbjct: 384 KVSLADQIQAAKVIKGKLH 402


>Medtr7g117530.1 | NUMOD3 motif protein | HC |
           chr7:48689940-48685784 | 20130731
          Length = 557

 Score =  103 bits (258), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 49/112 (43%), Positives = 71/112 (63%)

Query: 117 ERMRRFKIGLANKGRVPWNKGRKHSAETRERIKRRTSEALREPKVRKKMAEHPRFHSDKI 176
           E++RR +I  ANKG  PWNKGRKHS ET ++I+ RT  A++ PKV+ K+       + + 
Sbjct: 100 EKLRRLRISKANKGNTPWNKGRKHSPETLQKIRERTRIAMQNPKVKMKLTNLGHAQTTET 159

Query: 177 KEKISYSLRRVWQERLKSKRFREQIFLSWEQCIANAAKKGGCGQEELDWDSY 228
           K KIS  +R++W+ R   K  +E     W+  IA A+++G  GQEEL W+SY
Sbjct: 160 KMKISVGVRKLWEMRRGRKMVQESCCFEWQNLIAEASRQGFVGQEELQWNSY 211


>Medtr7g117530.2 | NUMOD3 motif protein | HC |
           chr7:48689904-48685841 | 20130731
          Length = 419

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%)

Query: 156 LREPKVRKKMAEHPRFHSDKIKEKISYSLRRVWQERLKSKRFREQIFLSWEQCIANAAKK 215
           ++ PKV+ K+       + + K KIS  +R++W+ R   K  +E     W+  IA A+++
Sbjct: 1   MQNPKVKMKLTNLGHAQTTETKMKISVGVRKLWEMRRGRKMVQESCCFEWQNLIAEASRQ 60

Query: 216 GGCGQEELDWDSY 228
           G  GQEEL W+SY
Sbjct: 61  GFVGQEELQWNSY 73


>Medtr7g117530.3 | NUMOD3 motif protein | HC |
           chr7:48689940-48685841 | 20130731
          Length = 423

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 35/58 (60%)

Query: 171 FHSDKIKEKISYSLRRVWQERLKSKRFREQIFLSWEQCIANAAKKGGCGQEELDWDSY 228
            HS + K KIS  +R++W+ R   K  +E     W+  IA A+++G  GQEEL W+SY
Sbjct: 20  LHSTETKMKISVGVRKLWEMRRGRKMVQESCCFEWQNLIAEASRQGFVGQEELQWNSY 77