Miyakogusa Predicted Gene

Lj3g3v0428470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0428470.1 Non Characterized Hit- tr|E0CSA7|E0CSA7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,50.5,1e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,gene.Ljchr3_pseudomol_20120830.path1.gene681.1
         (100 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g463990.1 | receptor-like kinase | HC | chr8:22589152-2259...    97   3e-21
Medtr8g463990.2 | receptor-like kinase | HC | chr8:22589009-2259...    97   3e-21
Medtr8g463990.3 | receptor-like kinase | HC | chr8:22588567-2259...    97   4e-21
Medtr8g463990.4 | receptor-like kinase | HC | chr8:22589038-2259...    97   4e-21
Medtr2g064930.1 | receptor-like kinase | HC | chr2:29362085-2936...    64   4e-11
Medtr8g461260.1 | receptor-like kinase | HC | chr8:21526635-2153...    64   4e-11
Medtr8g461250.1 | receptor-like kinase | LC | chr8:21521583-2152...    62   1e-10
Medtr2g064940.1 | receptor-like kinase | HC | chr2:29356076-2935...    61   3e-10
Medtr7g104560.1 | receptor-like kinase | LC | chr7:42380976-4237...    55   1e-08
Medtr4g088975.1 | receptor-like kinase | HC | chr4:35581165-3558...    49   1e-06

>Medtr8g463990.1 | receptor-like kinase | HC |
           chr8:22589152-22593844 | 20130731
          Length = 322

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/69 (63%), Positives = 57/69 (82%)

Query: 1   MDEAVRFCKISLLCTQDSPQNRPSMSTVLGMLRGRREVNEENVTKPGMIFEFVQAMDEGK 60
           ++EAV+FCK+ LLCTQDSPQ RPSMSTVL ML G ++VN++N+ KPGMIFEFV A D G 
Sbjct: 217 VEEAVKFCKVGLLCTQDSPQLRPSMSTVLKMLIGEKDVNDDNMIKPGMIFEFVDANDLGN 276

Query: 61  QKFKTEVEN 69
           ++ K E+E+
Sbjct: 277 KRGKAEMES 285


>Medtr8g463990.2 | receptor-like kinase | HC |
           chr8:22589009-22593984 | 20130731
          Length = 389

 Score = 97.1 bits (240), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 57/69 (82%)

Query: 1   MDEAVRFCKISLLCTQDSPQNRPSMSTVLGMLRGRREVNEENVTKPGMIFEFVQAMDEGK 60
           ++EAV+FCK+ LLCTQDSPQ RPSMSTVL ML G ++VN++N+ KPGMIFEFV A D G 
Sbjct: 284 VEEAVKFCKVGLLCTQDSPQLRPSMSTVLKMLIGEKDVNDDNMIKPGMIFEFVDANDLGN 343

Query: 61  QKFKTEVEN 69
           ++ K E+E+
Sbjct: 344 KRGKAEMES 352


>Medtr8g463990.3 | receptor-like kinase | HC |
           chr8:22588567-22593844 | 20130731
          Length = 332

 Score = 96.7 bits (239), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 57/69 (82%)

Query: 1   MDEAVRFCKISLLCTQDSPQNRPSMSTVLGMLRGRREVNEENVTKPGMIFEFVQAMDEGK 60
           ++EAV+FCK+ LLCTQDSPQ RPSMSTVL ML G ++VN++N+ KPGMIFEFV A D G 
Sbjct: 227 VEEAVKFCKVGLLCTQDSPQLRPSMSTVLKMLIGEKDVNDDNMIKPGMIFEFVDANDLGN 286

Query: 61  QKFKTEVEN 69
           ++ K E+E+
Sbjct: 287 KRGKAEMES 295


>Medtr8g463990.4 | receptor-like kinase | HC |
           chr8:22589038-22593844 | 20130731
          Length = 332

 Score = 96.7 bits (239), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 57/69 (82%)

Query: 1   MDEAVRFCKISLLCTQDSPQNRPSMSTVLGMLRGRREVNEENVTKPGMIFEFVQAMDEGK 60
           ++EAV+FCK+ LLCTQDSPQ RPSMSTVL ML G ++VN++N+ KPGMIFEFV A D G 
Sbjct: 227 VEEAVKFCKVGLLCTQDSPQLRPSMSTVLKMLIGEKDVNDDNMIKPGMIFEFVDANDLGN 286

Query: 61  QKFKTEVEN 69
           ++ K E+E+
Sbjct: 287 KRGKAEMES 295


>Medtr2g064930.1 | receptor-like kinase | HC |
           chr2:29362085-29365653 | 20130731
          Length = 390

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 48/67 (71%)

Query: 2   DEAVRFCKISLLCTQDSPQNRPSMSTVLGMLRGRREVNEENVTKPGMIFEFVQAMDEGKQ 61
           ++A +F KI LLCTQ+SP++RPSMSTV+ ML G  +V++  +TKP +I +F+      KQ
Sbjct: 289 EQACKFLKIGLLCTQESPKSRPSMSTVVKMLTGEMKVDDSMMTKPALISDFMDLKVRHKQ 348

Query: 62  KFKTEVE 68
           +  T+++
Sbjct: 349 ESITDMK 355


>Medtr8g461260.1 | receptor-like kinase | HC |
           chr8:21526635-21530742 | 20130731
          Length = 390

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/48 (54%), Positives = 38/48 (79%)

Query: 2   DEAVRFCKISLLCTQDSPQNRPSMSTVLGMLRGRREVNEENVTKPGMI 49
           +EA +  KI+LLCTQD+P+ RP+MS+V+ ML G  ++NE  +TKPG+I
Sbjct: 287 EEACKILKIALLCTQDTPKLRPTMSSVVKMLTGEMDINETKITKPGLI 334


>Medtr8g461250.1 | receptor-like kinase | LC |
           chr8:21521583-21523313 | 20130731
          Length = 315

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 39/49 (79%)

Query: 1   MDEAVRFCKISLLCTQDSPQNRPSMSTVLGMLRGRREVNEENVTKPGMI 49
           ++EA ++ KISLLCTQ SP+ RP+MS+VL ML G  +V+E  +T+PG++
Sbjct: 263 LEEACKYLKISLLCTQSSPRLRPTMSSVLKMLIGEMDVDESKITRPGLV 311


>Medtr2g064940.1 | receptor-like kinase | HC |
           chr2:29356076-29358392 | 20130731
          Length = 381

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 43/61 (70%)

Query: 2   DEAVRFCKISLLCTQDSPQNRPSMSTVLGMLRGRREVNEENVTKPGMIFEFVQAMDEGKQ 61
           ++A +F KI LLCTQ+SP+ RPSMS+V+ ML G  EV++  +TKP +I + +    + KQ
Sbjct: 284 EQACKFLKIGLLCTQESPKRRPSMSSVVKMLTGEMEVDDSMMTKPALISDLMDLKVKHKQ 343

Query: 62  K 62
           +
Sbjct: 344 E 344


>Medtr7g104560.1 | receptor-like kinase | LC |
           chr7:42380976-42378548 | 20130731
          Length = 295

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 32/49 (65%)

Query: 3   EAVRFCKISLLCTQDSPQNRPSMSTVLGMLRGRREVNEENVTKPGMIFE 51
           EA RF KISL CT D P+ RPSMST++ ML G   VNEE + K   I +
Sbjct: 246 EAPRFSKISLFCTHDFPELRPSMSTIVNMLNGEEYVNEEILKKSNPILK 294


>Medtr4g088975.1 | receptor-like kinase | HC |
           chr4:35581165-35587641 | 20130731
          Length = 367

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)

Query: 2   DEAVRFCKISLLCTQDSPQNRPSMSTVLGMLRGRREVNEENVTKPGMIFEFVQAMDEGKQ 61
           +E +R+ K++  CTQ +   RPSMS V+ ML  +  +NE+ +T PG    F Q   E   
Sbjct: 287 EEVIRYMKVAFFCTQAAASRRPSMSQVVDMLSKKIRLNEKQITAPG----FFQTSGESSL 342

Query: 62  K 62
           K
Sbjct: 343 K 343