Miyakogusa Predicted Gene

Lj3g3v0428420.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0428420.2 Non Characterized Hit- tr|C5YWM0|C5YWM0_SORBI
Putative uncharacterized protein Sb09g030170
OS=Sorghu,41.33,0.0000004,TPR REPEAT CONTAINING PROTEIN,NULL;
TPR-like,NULL; TPR,Tetratricopeptide repeat;
TPR_REGION,Tetratri,CUFF.40699.2
         (431 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g078020.2 | TPR repeat thioredoxin TTL1-like protein | HC ...   349   3e-96
Medtr2g078020.1 | TPR repeat thioredoxin TTL1-like protein | HC ...   348   5e-96
Medtr3g087480.1 | inactive TPR repeat thioredoxin TTL3-like prot...   147   2e-35
Medtr3g074230.1 | TPR repeat thioredoxin TTL1-like protein | HC ...   131   1e-30
Medtr3g074230.2 | TPR repeat thioredoxin TTL1-like protein | HC ...   131   1e-30
Medtr5g063200.1 | inactive TPR repeat thioredoxin TTL3-like prot...   128   1e-29

>Medtr2g078020.2 | TPR repeat thioredoxin TTL1-like protein | HC |
           chr2:32334950-32330878 | 20130731
          Length = 636

 Score =  349 bits (896), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 203/439 (46%), Positives = 248/439 (56%), Gaps = 51/439 (11%)

Query: 17  LSERLRDSPSCGGDDGNKPDFRELDLGSPISPLPGRHHRQXXXXXXXXXXXXXXXXXXXX 76
            S+R R + +    + NKPDFRELDLGSP+SPL  R                        
Sbjct: 20  FSDRFRQTVTL---EANKPDFRELDLGSPVSPLRTRGGPSVSSSSGSSGSFSGGGGGRIG 76

Query: 77  XXXCRSGHNLVTRRSDS---------GELS--VQNSPT--------RSVKPGHRRSDSCS 117
                   N V++RSDS         GELS   +NSPT        R  KPGH RS+S S
Sbjct: 77  S-------NPVSKRSDSAPSKDNNNSGELSGSSENSPTADRSTGNVRGTKPGHTRSNSGS 129

Query: 118 SQPLIYXXXXXXXXXXXXXXXXXXXXXXXXXNVLPAGNICPSGRVLKPAMVVNRSSRPDV 177
              L++                         NVLP GNICPSGR+LK  M  NRSSR DV
Sbjct: 130 G--LLHSGQTVNSPPL---------------NVLPTGNICPSGRILKTGMAANRSSRSDV 172

Query: 178 LGTGTGNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDS--VKRVEAEEVKRAGNEEY 235
           LG+GTGNY                                   V+ V+ EE+K+AGNE Y
Sbjct: 173 LGSGTGNYGHGSIMRGGGVGVVTGKVESNSMRSGIGGDLGKRGVQSVDPEELKKAGNEHY 232

Query: 236 RRGRFVEALRLYDRAIALSPGNVXXXXXXXXXXXXXXXXXXXVTTCEEALGLDPNYGRAH 295
           ++G F +AL LYDRAI++SPG+                    V  CEEA+ LDPNY RAH
Sbjct: 233 KKGHFSDALSLYDRAISMSPGSASYRSNRAAALTGLGRLAEAVKECEEAVRLDPNYSRAH 292

Query: 296 QRLATIFLRLGHVENARKHLCYHGLQPDPSELQKLQMAEKHIKKCVDVRRIRDWRSVMKE 355
            RLA++F+RLG VENARKHLC+ GL PDP+E+QKL+M EKHI KC DVRR+ DW+SV++E
Sbjct: 293 YRLASLFIRLGQVENARKHLCHPGLTPDPTEMQKLKMVEKHINKCADVRRVGDWKSVLRE 352

Query: 356 VDAAIAAGVDSCAELLMCRAEALLKLHQIDDAESCLSQISKCGPRPTS---SSEARFFGM 412
           +DA++AAG DS  +L MCRAEALLKLHQIDDAES L  + K  PR  S   SS+ARFFGM
Sbjct: 353 LDASVAAGADSSPQLFMCRAEALLKLHQIDDAESVLLHVPKSEPRGNSNNTSSQARFFGM 412

Query: 413 LSEAYCFFVRSQIEMALGR 431
           +SEAY +FV++QIEMALGR
Sbjct: 413 ISEAYSYFVKAQIEMALGR 431


>Medtr2g078020.1 | TPR repeat thioredoxin TTL1-like protein | HC |
           chr2:32334950-32330878 | 20130731
          Length = 696

 Score =  348 bits (894), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 203/439 (46%), Positives = 248/439 (56%), Gaps = 51/439 (11%)

Query: 17  LSERLRDSPSCGGDDGNKPDFRELDLGSPISPLPGRHHRQXXXXXXXXXXXXXXXXXXXX 76
            S+R R + +    + NKPDFRELDLGSP+SPL  R                        
Sbjct: 20  FSDRFRQTVTL---EANKPDFRELDLGSPVSPLRTRGGPSVSSSSGSSGSFSGGGGGRIG 76

Query: 77  XXXCRSGHNLVTRRSDS---------GELS--VQNSPT--------RSVKPGHRRSDSCS 117
                   N V++RSDS         GELS   +NSPT        R  KPGH RS+S S
Sbjct: 77  S-------NPVSKRSDSAPSKDNNNSGELSGSSENSPTADRSTGNVRGTKPGHTRSNSGS 129

Query: 118 SQPLIYXXXXXXXXXXXXXXXXXXXXXXXXXNVLPAGNICPSGRVLKPAMVVNRSSRPDV 177
              L++                         NVLP GNICPSGR+LK  M  NRSSR DV
Sbjct: 130 G--LLHSGQTVNSPPL---------------NVLPTGNICPSGRILKTGMAANRSSRSDV 172

Query: 178 LGTGTGNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDS--VKRVEAEEVKRAGNEEY 235
           LG+GTGNY                                   V+ V+ EE+K+AGNE Y
Sbjct: 173 LGSGTGNYGHGSIMRGGGVGVVTGKVESNSMRSGIGGDLGKRGVQSVDPEELKKAGNEHY 232

Query: 236 RRGRFVEALRLYDRAIALSPGNVXXXXXXXXXXXXXXXXXXXVTTCEEALGLDPNYGRAH 295
           ++G F +AL LYDRAI++SPG+                    V  CEEA+ LDPNY RAH
Sbjct: 233 KKGHFSDALSLYDRAISMSPGSASYRSNRAAALTGLGRLAEAVKECEEAVRLDPNYSRAH 292

Query: 296 QRLATIFLRLGHVENARKHLCYHGLQPDPSELQKLQMAEKHIKKCVDVRRIRDWRSVMKE 355
            RLA++F+RLG VENARKHLC+ GL PDP+E+QKL+M EKHI KC DVRR+ DW+SV++E
Sbjct: 293 YRLASLFIRLGQVENARKHLCHPGLTPDPTEMQKLKMVEKHINKCADVRRVGDWKSVLRE 352

Query: 356 VDAAIAAGVDSCAELLMCRAEALLKLHQIDDAESCLSQISKCGPRPTS---SSEARFFGM 412
           +DA++AAG DS  +L MCRAEALLKLHQIDDAES L  + K  PR  S   SS+ARFFGM
Sbjct: 353 LDASVAAGADSSPQLFMCRAEALLKLHQIDDAESVLLHVPKSEPRGNSNNTSSQARFFGM 412

Query: 413 LSEAYCFFVRSQIEMALGR 431
           +SEAY +FV++QIEMALGR
Sbjct: 413 ISEAYSYFVKAQIEMALGR 431


>Medtr3g087480.1 | inactive TPR repeat thioredoxin TTL3-like protein
           | HC | chr3:39659179-39661582 | 20130731
          Length = 577

 Score =  147 bits (370), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 115/211 (54%), Gaps = 4/211 (1%)

Query: 221 RVEAEEVKRAGNEEYRRGRFVEALRLYDRAIALSPGNVXXXXXXXXXXXXXXXXXXXVTT 280
           R++ E++K  GNE+Y+ GRF EAL LYD AIA+ P                      V  
Sbjct: 219 RMDPEQLKIMGNEDYKNGRFAEALSLYDAAIAIDPKTASYRSNRSAALTALGRLLEAVFE 278

Query: 281 CEEALGLDPNYGRAHQRLATIFLRLGHVENARKHLCYHGLQPDPSELQKLQMAEKHIKKC 340
           C EA+ +DP+Y RAH RL  +  RLG  + A  H    G + DP E+ K+++ + H+ KC
Sbjct: 279 CREAIQIDPHYHRAHHRLGNLHFRLGETDKALYHYKQAGPEADPDEVAKVKILQAHLSKC 338

Query: 341 VDVRRIRDWRSVMKEVDAAIAAGVDSCAELLMCRAEALLKLHQIDDAESCLSQISKCGPR 400
            + RR+ DW +++ E    +++G DS  ++   +AEAL+KL +  DA++ +   SKC P 
Sbjct: 339 TEARRLGDWNTLITETSKILSSGADSAPQIFALQAEALIKLRRHQDADNVM---SKC-PN 394

Query: 401 PTSSSEARFFGMLSEAYCFFVRSQIEMALGR 431
                  +FFG +  +     R+Q+++A GR
Sbjct: 395 FDVDDCTKFFGPIGNSNLLVTRAQVDIAAGR 425


>Medtr3g074230.1 | TPR repeat thioredoxin TTL1-like protein | HC |
           chr3:33532747-33528800 | 20130731
          Length = 656

 Score =  131 bits (330), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 114/213 (53%), Gaps = 11/213 (5%)

Query: 222 VEAEEVKRAGNEEYRRGRFVEALRLYDRAIALSPGNVXXXXXXXXXXXXXXXXXXXVTTC 281
           ++ E +K  GNE Y++GRF EAL LY+RAIA+                        +  C
Sbjct: 189 LDPEVLKSMGNEAYKQGRFSEALALYERAIAIDSNKATYHCNKSAALIGLGRFQHAIVEC 248

Query: 282 EEALGLDPNYGRAHQRLATIFLRLGHVE---NARKHLCYHGLQPDPSELQKLQMAEKHIK 338
           EEA+ +DP+Y RAH RLATI+ RLG  E   N  K   Y   + D  + Q LQ+   H  
Sbjct: 249 EEAIRIDPSYPRAHSRLATIYFRLGEAEKALNCNKETPYFDSELD-FQAQALQV---HFN 304

Query: 339 KCVDVRRIRDWRSVMKEVDAAIAAGVDSCAELLMCRAEALLKLHQIDDAESCLSQISKCG 398
           KC + R+++DW+ ++KE  +AI+ GVDS  ++   + EALLKL +  +A +   ++    
Sbjct: 305 KCSEARKVKDWKVILKETQSAISLGVDSAPKVYALQTEALLKLLRQQEAYTIYEKM---- 360

Query: 399 PRPTSSSEARFFGMLSEAYCFFVRSQIEMALGR 431
           P+       + FG +S AY   + +Q+ +A GR
Sbjct: 361 PKFDLDWCNKLFGPVSSAYLLMIGAQVYLAAGR 393


>Medtr3g074230.2 | TPR repeat thioredoxin TTL1-like protein | HC |
           chr3:33532747-33528806 | 20130731
          Length = 610

 Score =  131 bits (329), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 114/213 (53%), Gaps = 11/213 (5%)

Query: 222 VEAEEVKRAGNEEYRRGRFVEALRLYDRAIALSPGNVXXXXXXXXXXXXXXXXXXXVTTC 281
           ++ E +K  GNE Y++GRF EAL LY+RAIA+                        +  C
Sbjct: 189 LDPEVLKSMGNEAYKQGRFSEALALYERAIAIDSNKATYHCNKSAALIGLGRFQHAIVEC 248

Query: 282 EEALGLDPNYGRAHQRLATIFLRLGHVE---NARKHLCYHGLQPDPSELQKLQMAEKHIK 338
           EEA+ +DP+Y RAH RLATI+ RLG  E   N  K   Y   + D  + Q LQ+   H  
Sbjct: 249 EEAIRIDPSYPRAHSRLATIYFRLGEAEKALNCNKETPYFDSELD-FQAQALQV---HFN 304

Query: 339 KCVDVRRIRDWRSVMKEVDAAIAAGVDSCAELLMCRAEALLKLHQIDDAESCLSQISKCG 398
           KC + R+++DW+ ++KE  +AI+ GVDS  ++   + EALLKL +  +A +   ++    
Sbjct: 305 KCSEARKVKDWKVILKETQSAISLGVDSAPKVYALQTEALLKLLRQQEAYTIYEKM---- 360

Query: 399 PRPTSSSEARFFGMLSEAYCFFVRSQIEMALGR 431
           P+       + FG +S AY   + +Q+ +A GR
Sbjct: 361 PKFDLDWCNKLFGPVSSAYLLMIGAQVYLAAGR 393


>Medtr5g063200.1 | inactive TPR repeat thioredoxin TTL3-like protein
           | HC | chr5:26210750-26206440 | 20130731
          Length = 676

 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 7/208 (3%)

Query: 225 EEVKRAGNEEYRRGRFVEALRLYDRAIALSPGNVXXXXXXXXXXXXXXXXXXXVTTCEEA 284
           E +K  GNE Y++G+F EAL LYD+AIA+                        +  CEE+
Sbjct: 212 EVLKSMGNEAYKKGKFEEALALYDKAIAIDSNKATYHCNKSAALIGLGRFQEAIIECEES 271

Query: 285 LGLDPNYGRAHQRLATIFLRLGHVENARKHLCYHGLQPDPSELQ-KLQMAEKHIKKCVDV 343
           + LDP+Y RAH RLATI+ RLG VE A    C        S L  + Q  + H+KKC++ 
Sbjct: 272 IRLDPSYNRAHNRLATIYFRLGDVEKALD--CNRSTSNVDSVLAFQAQALQNHLKKCIEA 329

Query: 344 RRIRDWRSVMKEVDAAIAAGVDSCAELLMCRAEALLKLHQIDDAESCLSQISKCGPRPTS 403
           R+  +W  V+KE  +A++ G DS  ++   + EALLKL +  +A +    +    P+ + 
Sbjct: 330 RKFNEWSVVLKETQSALSLGADSAPQIYALQTEALLKLVRYQEAYAVYDNM----PKFSD 385

Query: 404 SSEARFFGMLSEAYCFFVRSQIEMALGR 431
               + FGM + AY   + + + +A GR
Sbjct: 386 DWCNKIFGMATSAYLSMISALVYLASGR 413