Miyakogusa Predicted Gene

Lj3g3v0427330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0427330.1 tr|F2CWA5|F2CWA5_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,30.14,1e-17,seg,NULL,CUFF.40695.1
         (400 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0022s0280.1 | hypothetical protein | HC | scaffold0022:8361...   178   9e-45
Medtr2g076330.2 | hypothetical protein | LC | chr2:31981425-3197...   130   2e-30
Medtr2g076330.1 | hypothetical protein | LC | chr2:31981407-3197...   130   2e-30
Medtr2g076330.3 | hypothetical protein | LC | chr2:31981425-3197...   130   3e-30

>Medtr0022s0280.1 | hypothetical protein | HC |
           scaffold0022:83610-89796 | 20130731
          Length = 363

 Score =  178 bits (451), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 114/249 (45%), Positives = 142/249 (57%), Gaps = 25/249 (10%)

Query: 106 PEWPCPA-SPDPKPTTGWGSSKPHSDPPPAVSPEEKERLAALQAQHKACKVFREFLCASX 164
           P WP P       P TGW +  P         P+E ERL+AL  Q+KACK F++ L    
Sbjct: 100 PGWPVPVPVSRNSPQTGWPTPNPPP------QPQEIERLSALHLQNKACKAFKDSLLIDS 153

Query: 165 XXXXXXXXXXXXX--------------XXXXXXFVGVFMEDDELRRYYQKYFENGDFSCL 210
                                            F+ VFMED+ELR YYQ+ FENG+F CL
Sbjct: 154 DDDDDDEVEEDYEDEDEDDNEDGDDRFKQFENFFIKVFMEDNELRWYYQRCFENGEFLCL 213

Query: 211 VCGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRRRAHRAFGQAVCKVLGWDIDRLPTIVMK 270
           VC A  K N  KK+KDC+GLVQHS  +LR   + AHRAFG+ VCKVLGWD+ RLPTIV+ 
Sbjct: 214 VCAADKKNNKNKKYKDCMGLVQHSKLILRTANKVAHRAFGEVVCKVLGWDVRRLPTIVLN 273

Query: 271 GEPLGCSAQAESEPKENVAADDDRQGGSD---KSDDEVVPLEHGDEPDEEHAQGCDHNIS 327
           GEPLG  AQ+  EPKE+VAA      G D    ++D  V L+H ++P EEHA+G D +I+
Sbjct: 274 GEPLG-PAQSLGEPKESVAAAAADDDGKDGLCNTEDIAVSLDHVEDPTEEHAKGVDKSIA 332

Query: 328 GCSSKESDM 336
            CSSKE D+
Sbjct: 333 ECSSKEGDI 341


>Medtr2g076330.2 | hypothetical protein | LC |
           chr2:31981425-31976396 | 20130731
          Length = 514

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/229 (38%), Positives = 113/229 (49%), Gaps = 31/229 (13%)

Query: 107 EWPCPASPDPKPTTGWGSSKPHSDPPPAVSPEEKERLAALQAQHKACKVFREFLC----- 161
           +W C  SPD   ++GW ++KP S P   V  EE   +A L  QH A +  ++FL      
Sbjct: 76  KWVCK-SPDGGLSSGW-NNKPCSYPYSLVGDEEA-IMAVLHLQHNAIEACQKFLAPDVGS 132

Query: 162 ------------ASXXXXXXXXXXXXXXXXXXXXFVGVFMEDDELRRYYQKYFENGDFSC 209
                                             F  VF ED  LR+YY+   + GDF C
Sbjct: 133 DSDDDVIEDEDEDEDESEDELVENCEEESKEYRFFEKVFAEDAGLRKYYENNSKEGDFYC 192

Query: 210 LVCGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRRRAHRAFGQAVCKVLGWDIDRLPTIVM 269
           LVCG V KK   K+FKDCV L+QHS +VLR  R RAHRA+ Q VCKV+GWDI++LP IV+
Sbjct: 193 LVCGGV-KKKMWKRFKDCVALIQHSTTVLRTKRMRAHRAYAQVVCKVVGWDINQLPAIVL 251

Query: 270 K--GEPLGCSAQAESEPKENVAADDDRQGGSDKSDDEVVPLEHGDEPDE 316
           K     L  S +   EP +  AA D         DD+   L+ G+ PDE
Sbjct: 252 KDLNSSLTASRELLVEPGKPAAASD--------VDDQNNSLKEGEIPDE 292



 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 93/183 (50%), Gaps = 22/183 (12%)

Query: 107 EWPCPASPD---PKPTTGW--GSSKPHSDPPPAVSPEEKERLAALQAQHKACKVFREFLC 161
           EW C  SPD       +GW   ++KP S P   V  EE   ++ L  QH A    ++FL 
Sbjct: 318 EWVCK-SPDGGLSSTASGWPAFNTKPCSYPYSLVGNEEA-IMSVLHLQHNAIDACQKFLA 375

Query: 162 ASXXXXXXXXXXXXXXXXXXXXFVG--------------VFMEDDELRRYYQKYFENGDF 207
                                   G              VF ED  LR YYQ   + GDF
Sbjct: 376 PEVGSDSDEDVIEDEDEDEGEDEFGENCEESEQYKFFEKVFAEDVGLREYYQTNSKKGDF 435

Query: 208 SCLVCGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRRRAHRAFGQAVCKVLGWDIDRLPTI 267
            CLVCG V KK   K+FKDCV L+QHS +VLR  R+RAHRA+ Q VCK++GWDI++LPTI
Sbjct: 436 YCLVCGGV-KKKMWKRFKDCVALIQHSTAVLRTKRKRAHRAYAQVVCKIVGWDINQLPTI 494

Query: 268 VMK 270
           V+K
Sbjct: 495 VLK 497


>Medtr2g076330.1 | hypothetical protein | LC |
           chr2:31981407-31976479 | 20130731
          Length = 534

 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/229 (38%), Positives = 113/229 (49%), Gaps = 31/229 (13%)

Query: 107 EWPCPASPDPKPTTGWGSSKPHSDPPPAVSPEEKERLAALQAQHKACKVFREFLC----- 161
           +W C  SPD   ++GW ++KP S P   V  EE   +A L  QH A +  ++FL      
Sbjct: 76  KWVCK-SPDGGLSSGW-NNKPCSYPYSLVGDEEA-IMAVLHLQHNAIEACQKFLAPDVGS 132

Query: 162 ------------ASXXXXXXXXXXXXXXXXXXXXFVGVFMEDDELRRYYQKYFENGDFSC 209
                                             F  VF ED  LR+YY+   + GDF C
Sbjct: 133 DSDDDVIEDEDEDEDESEDELVENCEEESKEYRFFEKVFAEDAGLRKYYENNSKEGDFYC 192

Query: 210 LVCGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRRRAHRAFGQAVCKVLGWDIDRLPTIVM 269
           LVCG V KK   K+FKDCV L+QHS +VLR  R RAHRA+ Q VCKV+GWDI++LP IV+
Sbjct: 193 LVCGGV-KKKMWKRFKDCVALIQHSTTVLRTKRMRAHRAYAQVVCKVVGWDINQLPAIVL 251

Query: 270 K--GEPLGCSAQAESEPKENVAADDDRQGGSDKSDDEVVPLEHGDEPDE 316
           K     L  S +   EP +  AA D         DD+   L+ G+ PDE
Sbjct: 252 KDLNSSLTASRELLVEPGKPAAASD--------VDDQNNSLKEGEIPDE 292



 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 107/211 (50%), Gaps = 23/211 (10%)

Query: 107 EWPCPASPD---PKPTTGW--GSSKPHSDPPPAVSPEEKERLAALQAQHKACKVFREFLC 161
           EW C  SPD       +GW   ++KP S P   V  EE   ++ L  QH A    ++FL 
Sbjct: 318 EWVCK-SPDGGLSSTASGWPAFNTKPCSYPYSLVGNEEA-IMSVLHLQHNAIDACQKFLA 375

Query: 162 ASXXXXXXXXXXXXXXXXXXXXFVG--------------VFMEDDELRRYYQKYFENGDF 207
                                   G              VF ED  LR YYQ   + GDF
Sbjct: 376 PEVGSDSDEDVIEDEDEDEGEDEFGENCEESEQYKFFEKVFAEDVGLREYYQTNSKKGDF 435

Query: 208 SCLVCGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRRRAHRAFGQAVCKVLGWDIDRLPTI 267
            CLVCG V KK   K+FKDCV L+QHS +VLR  R+RAHRA+ Q VCK++GWDI++LPTI
Sbjct: 436 YCLVCGGV-KKKMWKRFKDCVALIQHSTAVLRTKRKRAHRAYAQVVCKIVGWDINQLPTI 494

Query: 268 VMKG-EPLGCSAQAESEPKENVAADDDRQGG 297
           V+K       S +  +EP++  AA+DD + G
Sbjct: 495 VLKDLNSSAASRKLLAEPEKPAAANDDDRNG 525


>Medtr2g076330.3 | hypothetical protein | LC |
           chr2:31981425-31976396 | 20130731
          Length = 513

 Score =  130 bits (327), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/229 (38%), Positives = 113/229 (49%), Gaps = 31/229 (13%)

Query: 107 EWPCPASPDPKPTTGWGSSKPHSDPPPAVSPEEKERLAALQAQHKACKVFREFLC----- 161
           +W C  SPD   ++GW ++KP S P   V  EE   +A L  QH A +  ++FL      
Sbjct: 55  KWVCK-SPDGGLSSGW-NNKPCSYPYSLVGDEEA-IMAVLHLQHNAIEACQKFLAPDVGS 111

Query: 162 ------------ASXXXXXXXXXXXXXXXXXXXXFVGVFMEDDELRRYYQKYFENGDFSC 209
                                             F  VF ED  LR+YY+   + GDF C
Sbjct: 112 DSDDDVIEDEDEDEDESEDELVENCEEESKEYRFFEKVFAEDAGLRKYYENNSKEGDFYC 171

Query: 210 LVCGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRRRAHRAFGQAVCKVLGWDIDRLPTIVM 269
           LVCG V KK   K+FKDCV L+QHS +VLR  R RAHRA+ Q VCKV+GWDI++LP IV+
Sbjct: 172 LVCGGV-KKKMWKRFKDCVALIQHSTTVLRTKRMRAHRAYAQVVCKVVGWDINQLPAIVL 230

Query: 270 K--GEPLGCSAQAESEPKENVAADDDRQGGSDKSDDEVVPLEHGDEPDE 316
           K     L  S +   EP +  AA D         DD+   L+ G+ PDE
Sbjct: 231 KDLNSSLTASRELLVEPGKPAAASD--------VDDQNNSLKEGEIPDE 271



 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 107/211 (50%), Gaps = 23/211 (10%)

Query: 107 EWPCPASPD---PKPTTGW--GSSKPHSDPPPAVSPEEKERLAALQAQHKACKVFREFLC 161
           EW C  SPD       +GW   ++KP S P   V  EE   ++ L  QH A    ++FL 
Sbjct: 297 EWVCK-SPDGGLSSTASGWPAFNTKPCSYPYSLVGNEEA-IMSVLHLQHNAIDACQKFLA 354

Query: 162 ASXXXXXXXXXXXXXXXXXXXXFVG--------------VFMEDDELRRYYQKYFENGDF 207
                                   G              VF ED  LR YYQ   + GDF
Sbjct: 355 PEVGSDSDEDVIEDEDEDEGEDEFGENCEESEQYKFFEKVFAEDVGLREYYQTNSKKGDF 414

Query: 208 SCLVCGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRRRAHRAFGQAVCKVLGWDIDRLPTI 267
            CLVCG V KK   K+FKDCV L+QHS +VLR  R+RAHRA+ Q VCK++GWDI++LPTI
Sbjct: 415 YCLVCGGV-KKKMWKRFKDCVALIQHSTAVLRTKRKRAHRAYAQVVCKIVGWDINQLPTI 473

Query: 268 VMKG-EPLGCSAQAESEPKENVAADDDRQGG 297
           V+K       S +  +EP++  AA+DD + G
Sbjct: 474 VLKDLNSSAASRKLLAEPEKPAAANDDDRNG 504