Miyakogusa Predicted Gene

Lj3g3v0427320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0427320.1 Non Characterized Hit- tr|I1LSU1|I1LSU1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,70.37,0.00000000000009,HAD-like,HAD-like domain; Glucocorticoid
receptor-like (DNA-binding domain),NULL;
PARP_ZN_FINGER_2,Z,CUFF.40693.1
         (380 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g466500.1 | polynucleotide phosphatase/kinase | HC | chr6:...   510   e-145
Medtr6g466500.2 | polynucleotide phosphatase/kinase | HC | chr6:...   510   e-144
Medtr6g052000.1 | poly [ADP-ribose] polymerase | HC | chr6:18129...   110   2e-24
Medtr6g464930.1 | polynucleotide kinase 3 phosphatase | LC | chr...    90   3e-18
Medtr6g052005.1 | hypothetical protein | HC | chr6:18134886-1813...    89   8e-18

>Medtr6g466500.1 | polynucleotide phosphatase/kinase | HC |
           chr6:23885829-23895496 | 20130731
          Length = 347

 Score =  510 bits (1314), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 256/347 (73%), Positives = 290/347 (83%), Gaps = 11/347 (3%)

Query: 45  MATPES-IKAEYAKSNRSSCKGCSKTIENKSLRLGIVSKDKTRGFETVKWHHLTCFPPPY 103
           MA  ES + AEYAKSNRS+CK CS+ I++K+LRLG+++KDK+RGF+  KWHHLTCF  P 
Sbjct: 1   MAPSESSVVAEYAKSNRSTCKKCSEAIQSKTLRLGLITKDKSRGFDVTKWHHLTCFTVPS 60

Query: 104 PDSP-HIITGFSSLESSDQEAVKELFESHDCSEEKVSKATEDIQNEQKETEESDSKKRKL 162
             S    ITGFSSL+S DQEA+ +LF   + +  + SK T+ IQNE+++ EE DSKK KL
Sbjct: 61  SHSSIDKITGFSSLKSGDQEALTKLFTEQEDNSAEASKKTKGIQNEEQDAEERDSKKTKL 120

Query: 163 STSDVKAVVDISFSVSDVMSKYKDATLLPKWKAFQTVIFLERDDGLHDSSKIAAFDFDGC 222
           STSDVKA ++I+FSVSDV S YKDATLLPKWKAFQTVIFLERDDGL DSSKIAAFDFDGC
Sbjct: 121 STSDVKAAININFSVSDVKSTYKDATLLPKWKAFQTVIFLERDDGLEDSSKIAAFDFDGC 180

Query: 223 LANTAVNRVGPKAWSLMYQSIPDKLQSLYNNGYKLVIFTNESNIERWKKSRQKAVDSKIG 282
           LA TAVNRVGP AWSLMY SIPDKLQSLYNNGYKLVIFTNESNI+RWK SRQKAVDSKIG
Sbjct: 181 LAKTAVNRVGPDAWSLMYPSIPDKLQSLYNNGYKLVIFTNESNIDRWKNSRQKAVDSKIG 240

Query: 283 RLNNFIEKVKVPIQVFIAC---------GLSNSGKAAGKEDDPYRKPKPGMWQLMEQHFN 333
           RLN FIE+VKVPIQVFIAC             SGKA  +EDDP+RKPKPGMWQLME+HFN
Sbjct: 241 RLNQFIEEVKVPIQVFIACGTGKSGKAGKKGKSGKAGTEEDDPFRKPKPGMWQLMEKHFN 300

Query: 334 SGITIDMDQSFYVGDAAGRKSDHSDADIKFAEAIGLKFHLPEEYFKA 380
           SG+TIDMD+SFYVGDAAGR+SDHSDADIKFAEA GLKF++PEEYF A
Sbjct: 301 SGLTIDMDESFYVGDAAGRESDHSDADIKFAEANGLKFYVPEEYFAA 347


>Medtr6g466500.2 | polynucleotide phosphatase/kinase | HC |
           chr6:23886949-23895512 | 20130731
          Length = 373

 Score =  510 bits (1313), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/390 (66%), Positives = 302/390 (77%), Gaps = 27/390 (6%)

Query: 1   MLSILRFFAANTCHRPNIFPKLFTVPAPPPPFRTASGGRNPLLPMATPESIKAEYAKSNR 60
           MLS ++FF     H   +    +               R+ + P  +  S+ AEYAKSNR
Sbjct: 1   MLSCIKFFIPIPVHSRIVLLNAY---------------RHTMAP--SESSVVAEYAKSNR 43

Query: 61  SSCKGCSKTIENKSLRLGIVSKDKTRGFETVKWHHLTCFPPPYPDSP-HIITGFSSLESS 119
           S+CK CS+ I++K+LRLG+++KDK+RGF+  KWHHLTCF  P   S    ITGFSSL+S 
Sbjct: 44  STCKKCSEAIQSKTLRLGLITKDKSRGFDVTKWHHLTCFTVPSSHSSIDKITGFSSLKSG 103

Query: 120 DQEAVKELFESHDCSEEKVSKATEDIQNEQKETEESDSKKRKLSTSDVKAVVDISFSVSD 179
           DQEA+ +LF   + +  + SK T+ IQNE+++ EE DSKK KLSTSDVKA ++I+FSVSD
Sbjct: 104 DQEALTKLFTEQEDNSAEASKKTKGIQNEEQDAEERDSKKTKLSTSDVKAAININFSVSD 163

Query: 180 VMSKYKDATLLPKWKAFQTVIFLERDDGLHDSSKIAAFDFDGCLANTAVNRVGPKAWSLM 239
           V S YKDATLLPKWKAFQTVIFLERDDGL DSSKIAAFDFDGCLA TAVNRVGP AWSLM
Sbjct: 164 VKSTYKDATLLPKWKAFQTVIFLERDDGLEDSSKIAAFDFDGCLAKTAVNRVGPDAWSLM 223

Query: 240 YQSIPDKLQSLYNNGYKLVIFTNESNIERWKKSRQKAVDSKIGRLNNFIEKVKVPIQVFI 299
           Y SIPDKLQSLYNNGYKLVIFTNESNI+RWK SRQKAVDSKIGRLN FIE+VKVPIQVFI
Sbjct: 224 YPSIPDKLQSLYNNGYKLVIFTNESNIDRWKNSRQKAVDSKIGRLNQFIEEVKVPIQVFI 283

Query: 300 AC---------GLSNSGKAAGKEDDPYRKPKPGMWQLMEQHFNSGITIDMDQSFYVGDAA 350
           AC             SGKA  +EDDP+RKPKPGMWQLME+HFNSG+TIDMD+SFYVGDAA
Sbjct: 284 ACGTGKSGKAGKKGKSGKAGTEEDDPFRKPKPGMWQLMEKHFNSGLTIDMDESFYVGDAA 343

Query: 351 GRKSDHSDADIKFAEAIGLKFHLPEEYFKA 380
           GR+SDHSDADIKFAEA GLKF++PEEYF A
Sbjct: 344 GRESDHSDADIKFAEANGLKFYVPEEYFAA 373


>Medtr6g052000.1 | poly [ADP-ribose] polymerase | HC |
           chr6:18129426-18131464 | 20130731
          Length = 107

 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/96 (62%), Positives = 73/96 (76%), Gaps = 5/96 (5%)

Query: 45  MATPES-IKAEYAKSNRSSCKGCSKTIENKSLRLGIVSKDKTRGFETVKWHHLTCFPPP- 102
           MA  ES + AEYAKSNRS+CK CS+ I++K+LRLG+V+KDK+RGF+  KWHHLTCFP P 
Sbjct: 1   MAPSESSVVAEYAKSNRSTCKKCSEAIQSKTLRLGLVTKDKSRGFDVTKWHHLTCFPVPS 60

Query: 103 -YPDSPHIITGFSSLESSDQEAVKELF-ESHDCSEE 136
            Y     II GFSSL+S DQEA+ +LF E  D SEE
Sbjct: 61  SYSSIDKII-GFSSLKSGDQEALTKLFTEQEDNSEE 95


>Medtr6g464930.1 | polynucleotide kinase 3 phosphatase | LC |
           chr6:22963248-22963583 | 20130731
          Length = 111

 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 37/47 (78%), Positives = 43/47 (91%)

Query: 295 IQVFIACGLSNSGKAAGKEDDPYRKPKPGMWQLMEQHFNSGITIDMD 341
           IQVFIACG+  SGKA  +EDDP+RKPKPGMWQLME+HFNSG+TIDM+
Sbjct: 40  IQVFIACGIGKSGKAGTEEDDPFRKPKPGMWQLMEKHFNSGLTIDMN 86


>Medtr6g052005.1 | hypothetical protein | HC |
           chr6:18134886-18135773 | 20130731
          Length = 94

 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 41/45 (91%), Positives = 42/45 (93%)

Query: 185 KDATLLPKWKAFQTVIFLERDDGLHDSSKIAAFDFDGCLANTAVN 229
           +DATLLPKWKAFQTVIFLERDDG  DSSKIAAFDFDGCLA TAVN
Sbjct: 50  QDATLLPKWKAFQTVIFLERDDGQEDSSKIAAFDFDGCLAKTAVN 94