Miyakogusa Predicted Gene

Lj3g3v0424220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0424220.1 Non Characterized Hit- tr|I1N057|I1N057_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44647
PE,34.88,1e-18,seg,NULL,CUFF.40682.1
         (208 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g445730.1 | transmembrane protein, putative | HC | chr8:17...   303   7e-83
Medtr3g461540.1 | transmembrane protein, putative | HC | chr3:24...    72   4e-13

>Medtr8g445730.1 | transmembrane protein, putative | HC |
           chr8:17445238-17446079 | 20130731
          Length = 207

 Score =  303 bits (776), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 157/209 (75%), Positives = 167/209 (79%), Gaps = 3/209 (1%)

Query: 1   MANDDADAMTT-RTSIMEWKQMHPLHQIAETPTHXXXXXXXXXXXXXIHGRIALKETQID 59
           MAN + D   + R+SIMEWKQMHPLHQIAETPTH             I+GRIALKETQID
Sbjct: 1   MANTNTDEHNSVRSSIMEWKQMHPLHQIAETPTHKLLLKQWLKEEELINGRIALKETQID 60

Query: 60  SIRKEITMLYIFFFLFHXXXXXXXXXXXXXXXXXRACHRSWVPSLCSLLFSLGSIWAVRY 119
           SIRKEITMLYIFFFLFH                 +ACH+SWVPSLCSLLFSLG IWA+RY
Sbjct: 61  SIRKEITMLYIFFFLFHSTTLMLLFNSSSVTTP-KACHKSWVPSLCSLLFSLGLIWALRY 119

Query: 120 KSDVEAHMEKMLRREKEDKGMLGKCVEELKKKGLEFDLLKEVDALRRAKSLKVVEVKEVR 179
           KSDVEAHMEKML REKED+G+L KCVEELKKKGLEFDLLKEVDALRRAKSL+ VE KEVR
Sbjct: 120 KSDVEAHMEKMLSREKEDRGLLRKCVEELKKKGLEFDLLKEVDALRRAKSLR-VESKEVR 178

Query: 180 KWSSRDFVSLFFFSMACLSLAVTRVILCS 208
           KWSSRDFVSLFFFSMACLSLAV RVILCS
Sbjct: 179 KWSSRDFVSLFFFSMACLSLAVIRVILCS 207


>Medtr3g461540.1 | transmembrane protein, putative | HC |
           chr3:24490651-24492573 | 20130731
          Length = 233

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 15/197 (7%)

Query: 22  HPLHQIAETPTHXXXXXXXXXXXXXIHGRIALKETQIDSIRKEITML---------YIFF 72
           HPL +I+E+P H                RI+ KET++DSI+ E+  L         +   
Sbjct: 41  HPLTEISESPGHLLLLKLWQREENLFAKRISRKETRMDSIKSELFQLTSFFFIFHGFFLT 100

Query: 73  FLFHXXXXXXXXXXXXXXXXXRACHRSWVPSLCSLLFSLGSIWAVRYKSDVEAHMEKMLR 132
            LF                   +C   W+PSL SL  SL  ++ V+ K      + + L+
Sbjct: 101 LLF-----TSWQKTQMNGGSGGSCKIWWIPSLISLSTSLVFVFLVQVKLVRYWKVWERLQ 155

Query: 133 REKEDKGMLGKCVEELKKKGLEFDLLKEVDALRRAKSLKVVEVK-EVRKWSSRDFVSLFF 191
           RE+ D   +G+C++EL+ KG  FDL KE+    +      VE+K +V  W +R  +++  
Sbjct: 156 RERNDSRGVGRCIQELRMKGASFDLSKELQVNGKRMKSSSVEIKWKVVTWFNRYLLTVSL 215

Query: 192 FSMACLSLAVTRVILCS 208
                L+   ++ +LC 
Sbjct: 216 VCFTGLAFPASKFVLCG 232