Miyakogusa Predicted Gene

Lj3g3v0423990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0423990.1 Non Characterized Hit- tr|D7SX10|D7SX10_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,56.58,4e-19,RecA protein, C-terminal domain,DNA recombination and
repair protein RecA, C-terminal; RecA,DNA reco,CUFF.40685.1
         (78 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g461220.1 | DNA repair and recombination protein | HC | ch...   115   6e-27

>Medtr8g461220.1 | DNA repair and recombination protein | HC |
           chr8:21510596-21499546 | 20130731
          Length = 418

 Score =  115 bits (289), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 54/77 (70%), Positives = 63/77 (81%), Gaps = 1/77 (1%)

Query: 1   MMDIVLKKGSWYSYGDQRLGQGRDKAIQYLNENPHLLHEVEKIVRSSLIDGTNQTSLGYM 60
           MM+IVLKKGSWYSYGD RLGQGR+K +QYL EN HLL EVEK+VRSS+ DGTNQT+  + 
Sbjct: 342 MMNIVLKKGSWYSYGDHRLGQGREKTLQYLKENTHLLEEVEKVVRSSMNDGTNQTTFSHT 401

Query: 61  KFSPTLHQDDDDTFEEA 77
           K SP L Q D+D FEE+
Sbjct: 402 KNSPMLPQ-DEDIFEES 417