Miyakogusa Predicted Gene

Lj3g3v0423810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0423810.1 tr|G7LBH1|G7LBH1_MEDTR NBS-LRR resistance-like
protein OS=Medicago truncatula GN=MTR_8g105820 PE=4 S,29.81,0.0004,
,NODE_80989_length_907_cov_8.740904.path1.1
         (104 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g090280.1 | disease resistance protein (TIR-NBS-LRR class)...    60   4e-10
Medtr8g105820.1 | disease resistance protein (TIR-NBS-LRR class)...    60   6e-10
Medtr7g056367.1 | disease resistance protein (TIR-NBS-LRR class)...    48   3e-06

>Medtr8g090280.1 | disease resistance protein (TIR-NBS-LRR class),
            putative | HC | chr8:37927657-37933266 | 20130731
          Length = 1045

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 18/118 (15%)

Query: 1    MCLVLQLKD---TRYGPFQCRITFKSDGRTYTLPQEAQLRNSFSFSAQ-QMGQRDHTFLW 56
            +C+VL   D   TR   F  R++F+S+G+ + LP    L++ F +  + +   +DHTFLW
Sbjct: 929  LCVVLGRVDYTRTRGSKFTYRLSFESEGQRHFLPNH-DLKSYFHWKGRDRFSVQDHTFLW 987

Query: 57   KSYLT-KSVHKGIFHASSFTF------------RNTYRLYSETSYLVKECGICPLYTK 101
            K  L  + +   +FHA  F F            +N Y    +++  VKECGICPLYTK
Sbjct: 988  KYQLDFERIGSKLFHAQHFAFEIHQDYHHHLRFQNHYLSGFQSTVKVKECGICPLYTK 1045


>Medtr8g105820.1 | disease resistance protein (TIR-NBS-LRR class) | HC
            | chr8:44645576-44640926 | 20130731
          Length = 1019

 Score = 59.7 bits (143), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 1    MCLVLQLKDTRYGPFQCRITFKSDGRTYTLPQEAQLRNSFSFSA--QQMGQRDHTFLWKS 58
            +C+VL   D       C++TF+SDG T++LP      N + +      +  +DHTF+W  
Sbjct: 910  LCVVLGRVDMVIDNIICKLTFESDGHTHSLPISNFGNNYYCYGKGRDMLFIQDHTFIWTY 969

Query: 59   YLT-KSVHKGIFHASSFTF------RNTYRLYSETSYLVKECGICPLYT 100
             L  +S+   +F A  FTF       +    Y ++  +VKE G+CP YT
Sbjct: 970  PLHFRSIDNRVFDAQKFTFEFSEVCEDNCLSYLKSDVMVKESGVCPFYT 1018


>Medtr7g056367.1 | disease resistance protein (TIR-NBS-LRR class),
           putative | LC | chr7:19875475-19874113 | 20130731
          Length = 382

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 1   MCLVLQLKD-----TRYGPFQCRITFKSDGRTYTLPQEAQLR-NSFSFSAQQMGQRDHTF 54
           + +VL+ +D      R G F CR+TF++DG T  L   A+++ + FS    ++  +DHTF
Sbjct: 292 LSVVLECRDMDDAIARSGSFTCRLTFEADGGTQILANYAEIKYHFFSKDGSRLVIQDHTF 351

Query: 55  LWKSYLT-KSVHKGIFHASSFTFR 77
           + K +L   S+   +F A +FTF 
Sbjct: 352 IRKYHLDFASIDNWLFDAHNFTFE 375