Miyakogusa Predicted Gene

Lj3g3v0421680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0421680.1 Non Characterized Hit- tr|I3SVJ6|I3SVJ6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.5,0,Mss4-like,Mss4-like; TIGR00357: methionine-R-sulfoxide
reductase,Peptide methionine sulphoxide reduc,CUFF.40662.1
         (201 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g461030.1 | methionine sulfoxide reductase B 2 | HC | chr8...   267   4e-72
Medtr4g092800.1 | methionine sulfoxide reductase B 2 | HC | chr4...   111   5e-25
Medtr2g020930.3 | methionine sulfoxide reductase B 2 | HC | chr2...   106   1e-23
Medtr2g020930.2 | methionine sulfoxide reductase B 2 | HC | chr2...   106   1e-23
Medtr2g020930.1 | methionine sulfoxide reductase B 2 | HC | chr2...   106   1e-23
Medtr2g020950.1 | methionine sulfoxide reductase B 2 | HC | chr2...    96   2e-20
Medtr2g020900.1 | methionine sulfoxide reductase B | HC | chr2:7...    74   6e-14

>Medtr8g461030.1 | methionine sulfoxide reductase B 2 | HC |
           chr8:21360074-21356822 | 20130731
          Length = 204

 Score =  267 bits (683), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 131/183 (71%), Positives = 144/183 (78%)

Query: 19  IPKLDSKVLLCPSPPAYTKLTXXXXXXXXXXXXXXXXXNQADKIETQSGAGSVDYKSLSN 78
           I K DSK+LL PS       T                 N  +  E QSG+  VDYKSLS+
Sbjct: 22  IQKFDSKLLLWPSRLHTKPTTKLSSSIRAMGSSASSNSNNPNTTEIQSGSSPVDYKSLSD 81

Query: 79  DEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTGWP 138
            EWKK+LT+EQFYVTR+KGTERAFTGEYWNTKT GTY+CICCDTPLFESS+KFNSGTGWP
Sbjct: 82  AEWKKQLTDEQFYVTRKKGTERAFTGEYWNTKTEGTYHCICCDTPLFESSTKFNSGTGWP 141

Query: 139 SYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVFDDGPPPTGKRYCINSASLKLK 198
           SY QPIG NVKSKLDLS+IFMPRQEVLCAVCDAHLGH+FDDGPPPTGKRYCINSASLKLK
Sbjct: 142 SYYQPIGKNVKSKLDLSIIFMPRQEVLCAVCDAHLGHIFDDGPPPTGKRYCINSASLKLK 201

Query: 199 TKQ 201
            ++
Sbjct: 202 PRK 204


>Medtr4g092800.1 | methionine sulfoxide reductase B 2 | HC |
           chr4:36824496-36821805 | 20130731
          Length = 189

 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 55/123 (44%), Positives = 75/123 (60%), Gaps = 5/123 (4%)

Query: 77  SNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTG 136
           S +EW+  L+ EQF + RQKGTE   TGEY      G Y+C  C TPL++S++KFNSG G
Sbjct: 65  SEEEWQAILSPEQFRILRQKGTEYPGTGEYDKFFGEGVYSCAGCGTPLYKSTTKFNSGCG 124

Query: 137 WPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAS 194
           WP++ + +   +    D   +   R E+ CA C  HLGHVF  +  P PT +R+C+NS S
Sbjct: 125 WPAFYEGVPGAINRHADPDGM---RIEITCAACGGHLGHVFKGEGFPTPTNERHCVNSIS 181

Query: 195 LKL 197
           LK 
Sbjct: 182 LKF 184


>Medtr2g020930.3 | methionine sulfoxide reductase B 2 | HC |
           chr2:7040735-7038939 | 20130731
          Length = 139

 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 73/123 (59%), Gaps = 5/123 (4%)

Query: 77  SNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTG 136
           S +EW+  L+ EQF++ RQKGTE   TGEY      G YNC  C TPL++SS+KF+SG G
Sbjct: 11  SEEEWRAVLSPEQFHILRQKGTELKGTGEYNKFYEEGVYNCAGCGTPLYKSSTKFDSGCG 70

Query: 137 WPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAS 194
           WP++ +     +    D       R E+ CA C  HLGHVF  +    PT +R+C+NS S
Sbjct: 71  WPAFFEGFPGAINRYPDPD---GRRTEITCAACGGHLGHVFKGEGFKVPTDERHCVNSVS 127

Query: 195 LKL 197
           +K 
Sbjct: 128 VKF 130


>Medtr2g020930.2 | methionine sulfoxide reductase B 2 | HC |
           chr2:7040870-7038878 | 20130731
          Length = 139

 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 73/123 (59%), Gaps = 5/123 (4%)

Query: 77  SNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTG 136
           S +EW+  L+ EQF++ RQKGTE   TGEY      G YNC  C TPL++SS+KF+SG G
Sbjct: 11  SEEEWRAVLSPEQFHILRQKGTELKGTGEYNKFYEEGVYNCAGCGTPLYKSSTKFDSGCG 70

Query: 137 WPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAS 194
           WP++ +     +    D       R E+ CA C  HLGHVF  +    PT +R+C+NS S
Sbjct: 71  WPAFFEGFPGAINRYPDPD---GRRTEITCAACGGHLGHVFKGEGFKVPTDERHCVNSVS 127

Query: 195 LKL 197
           +K 
Sbjct: 128 VKF 130


>Medtr2g020930.1 | methionine sulfoxide reductase B 2 | HC |
           chr2:7040870-7038878 | 20130731
          Length = 139

 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 73/123 (59%), Gaps = 5/123 (4%)

Query: 77  SNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTG 136
           S +EW+  L+ EQF++ RQKGTE   TGEY      G YNC  C TPL++SS+KF+SG G
Sbjct: 11  SEEEWRAVLSPEQFHILRQKGTELKGTGEYNKFYEEGVYNCAGCGTPLYKSSTKFDSGCG 70

Query: 137 WPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAS 194
           WP++ +     +    D       R E+ CA C  HLGHVF  +    PT +R+C+NS S
Sbjct: 71  WPAFFEGFPGAINRYPDPD---GRRTEITCAACGGHLGHVFKGEGFKVPTDERHCVNSVS 127

Query: 195 LKL 197
           +K 
Sbjct: 128 VKF 130


>Medtr2g020950.1 | methionine sulfoxide reductase B 2 | HC |
           chr2:7046723-7045899 | 20130731
          Length = 138

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)

Query: 78  NDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTGW 137
           ++EW+  L+ +QF++ RQKGTE   TGEY      G YNC  C TPL++SS+KF+SG GW
Sbjct: 11  SEEWRAILSLDQFHILRQKGTELKGTGEYNKFYEEGVYNCAGCGTPLYKSSTKFDSGCGW 70

Query: 138 PSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSASL 195
           P++ +     +    D       R  + C  C   LGHVF  +    PT +R+C+NS S+
Sbjct: 71  PAFFEGFPGAINRSPDPD---GRRTVITCEACGGRLGHVFKGEGFKVPTDERHCVNSVSV 127

Query: 196 KL 197
           K 
Sbjct: 128 KF 129


>Medtr2g020900.1 | methionine sulfoxide reductase B | HC |
           chr2:7032560-7031587 | 20130731
          Length = 149

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 5/97 (5%)

Query: 103 TGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTGWPSYDQPIGNNVKSKLDLSVIFMPRQ 162
           TGEY      G YNC  C TP+++SS KF+SG GWP++ +     +    +       R 
Sbjct: 47  TGEYNKFYEEGVYNCARCGTPIYKSSIKFDSGCGWPTFFEGFPGAINRSPNPD---GRRT 103

Query: 163 EVLCAVCDAHLGHVF--DDGPPPTGKRYCINSASLKL 197
            + CA C  HLGHVF  ++   PT +R+C+NS S+K 
Sbjct: 104 VITCATCGGHLGHVFKGEEFKVPTDERHCVNSVSVKF 140