Miyakogusa Predicted Gene

Lj3g3v0420640.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0420640.1 Non Characterized Hit- tr|G7I8Y6|G7I8Y6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,48.76,0.00000000005,seg,NULL,
NODE_67318_length_710_cov_28.715492.path2.1
         (208 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g015040.1 | transmembrane protein, putative | HC | chr1:36...    50   2e-06

>Medtr1g015040.1 | transmembrane protein, putative | HC |
          chr1:3682071-3681008 | 20130731
          Length = 239

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 4/63 (6%)

Query: 18 MGSDSKSLRSIKKSIFSCIFQVVFMGLALLATVTSE-DNKVEAPSTSSSLWCITECGTCP 76
          MG + K+L  I KS F+    +VFM L L A  T E ++KVE PS  S L CI+EC TCP
Sbjct: 1  MGHN-KNLGFITKSWFAWTTNIVFMLLVLFANRTLEIEDKVEEPS--SGLLCISECVTCP 57

Query: 77 LIC 79
           IC
Sbjct: 58 TIC 60