Miyakogusa Predicted Gene

Lj3g3v0420550.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0420550.1 Non Characterized Hit- tr|D7STT2|D7STT2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,66.13,5e-19,seg,NULL; UPF0203,Mitochondrial
distribution/morphology family 35/apoptosis; OS09G0361700
PROTEIN,NU,NODE_73080_length_687_cov_38.285297.path2.1
         (86 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g104730.1 | protein phosphatase 2C | HC | chr3:48283317-48...   112   8e-26

>Medtr3g104730.1 | protein phosphatase 2C | HC |
          chr3:48283317-48284156 | 20130731
          Length = 84

 Score =  112 bits (280), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 49/83 (59%), Positives = 62/83 (74%)

Query: 4  KKKKRAXXXXXXXXXCAILRDAYHNCFNRWYAEKFMKGHCDKLDCVSEWQKYRACLSEHL 63
          ++K+ +         CA+LRDAYHNCF+RWY EKF+KG  DK +CVSEWQKY+ACLSEHL
Sbjct: 2  REKRGSKPASPSTSPCALLRDAYHNCFHRWYTEKFVKGQYDKQECVSEWQKYKACLSEHL 61

Query: 64 EDKDLIRLLEAENVVEDKAVDSK 86
          EDK +IR+LE EN  +D A  S+
Sbjct: 62 EDKQMIRILEGENAFQDSAFTSQ 84