Miyakogusa Predicted Gene

Lj3g3v0397260.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0397260.2 Non Characterized Hit- tr|I1KIA1|I1KIA1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4572
PE=,86.59,0,Per1,Per1-like; SUBFAMILY NOT NAMED,NULL;
PER1-RELATED,Per1-like,CUFF.40648.2
         (342 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g465410.1 | post-GPI attachment-like factor-protein | HC |...   509   e-144
Medtr6g465410.2 | post-GPI attachment-like factor-protein | HC |...   496   e-140
Medtr6g078860.1 | post-GPI attachment-like factor-protein | HC |...   425   e-119
Medtr6g078853.1 | post-GPI attachment-like factor-protein | HC |...   155   5e-38

>Medtr6g465410.1 | post-GPI attachment-like factor-protein | HC |
           chr6:23238097-23246146 | 20130731
          Length = 342

 Score =  509 bits (1312), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 234/336 (69%), Positives = 279/336 (83%)

Query: 7   FAFLLVLSWSVEVIDASAGDVDPRYRDCIRQCQETGCVAQSCFPHCKFPSDGEHFDRPWY 66
           F  L+VL   +  +DAS GD D  Y+ C+ QC+++GCV   CF HCKF SDG+  D PWY
Sbjct: 7   FVVLVVLCSFLLSVDASDGDTDLIYKGCVEQCEKSGCVGDRCFQHCKFSSDGKPIDGPWY 66

Query: 67  MQEPLYLQWKKWDCQNDCRYHCMLDREKERKLLNLVPVKYHGKWPFARIYGMQEAASVAF 126
           M EPLYL+WK+WDC+ DCRYHCML RE+ER  L   PVKYHGKWPF RIYG+QE  +VA 
Sbjct: 67  MHEPLYLEWKQWDCRTDCRYHCMLAREEERTKLGETPVKYHGKWPFRRIYGIQEPVAVAL 126

Query: 127 SALNLAMHFHGWVSFFILLYYKLPLKDGKEAYYEYAGLWHIYGLLSLNSWFWSAVFHSRD 186
           SALNLAM FHGWVSFFIL+YYKLPL+  K+AYYEY GLWHIYG+LS+N+W WSAVFHSR 
Sbjct: 127 SALNLAMQFHGWVSFFILVYYKLPLRPDKKAYYEYTGLWHIYGILSMNAWLWSAVFHSRA 186

Query: 187 VDLTETLDYSSAVILLGYSLILAILRSFNVRDEATRVMVSAPLIAFVITHVMYINFYKLD 246
           VDLTE L+YSSAV LLG+SLILAILR+FNVRDEATRVMVSAPL+AFV TH+MY+NFY+L+
Sbjct: 187 VDLTEKLNYSSAVALLGFSLILAILRAFNVRDEATRVMVSAPLVAFVTTHIMYLNFYELN 246

Query: 247 YGWNMIVCVVMAVVQLVIWAVWAGLSGHPSRWKLWLVVIAGGLAMLLEIYDFPPYEGLLD 306
           YG NM V ++MAVVQL+IWA+WAG+S HP+RWKLW VV+ G +AM+LE YDFPPY G +D
Sbjct: 247 YGLNMKVSMLMAVVQLLIWAIWAGVSSHPARWKLWTVVVGGVVAMILETYDFPPYMGYVD 306

Query: 307 AHALWHATTIPLTYIWWSFIRDDAEFRTSIRVKKAK 342
           AHA+W+A  IPLT++WWS+IRDDAEFRTS  +KK K
Sbjct: 307 AHAVWNAANIPLTFLWWSYIRDDAEFRTSALLKKVK 342


>Medtr6g465410.2 | post-GPI attachment-like factor-protein | HC |
           chr6:23238155-23245829 | 20130731
          Length = 349

 Score =  496 bits (1278), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 233/343 (67%), Positives = 277/343 (80%), Gaps = 7/343 (2%)

Query: 7   FAFLLVLSWSVEVIDASAGDVDPRY-------RDCIRQCQETGCVAQSCFPHCKFPSDGE 59
           F  L+VL   +  +DAS GD D  Y       R    +C+++GCV   CF HCKF SDG+
Sbjct: 7   FVVLVVLCSFLLSVDASDGDTDLIYNTDSSDRRSVWSRCEKSGCVGDRCFQHCKFSSDGK 66

Query: 60  HFDRPWYMQEPLYLQWKKWDCQNDCRYHCMLDREKERKLLNLVPVKYHGKWPFARIYGMQ 119
             D PWYM EPLYL+WK+WDC+ DCRYHCML RE+ER  L   PVKYHGKWPF RIYG+Q
Sbjct: 67  PIDGPWYMHEPLYLEWKQWDCRTDCRYHCMLAREEERTKLGETPVKYHGKWPFRRIYGIQ 126

Query: 120 EAASVAFSALNLAMHFHGWVSFFILLYYKLPLKDGKEAYYEYAGLWHIYGLLSLNSWFWS 179
           E  +VA SALNLAM FHGWVSFFIL+YYKLPL+  K+AYYEY GLWHIYG+LS+N+W WS
Sbjct: 127 EPVAVALSALNLAMQFHGWVSFFILVYYKLPLRPDKKAYYEYTGLWHIYGILSMNAWLWS 186

Query: 180 AVFHSRDVDLTETLDYSSAVILLGYSLILAILRSFNVRDEATRVMVSAPLIAFVITHVMY 239
           AVFHSR VDLTE L+YSSAV LLG+SLILAILR+FNVRDEATRVMVSAPL+AFV TH+MY
Sbjct: 187 AVFHSRAVDLTEKLNYSSAVALLGFSLILAILRAFNVRDEATRVMVSAPLVAFVTTHIMY 246

Query: 240 INFYKLDYGWNMIVCVVMAVVQLVIWAVWAGLSGHPSRWKLWLVVIAGGLAMLLEIYDFP 299
           +NFY+L+YG NM V ++MAVVQL+IWA+WAG+S HP+RWKLW VV+ G +AM+LE YDFP
Sbjct: 247 LNFYELNYGLNMKVSMLMAVVQLLIWAIWAGVSSHPARWKLWTVVVGGVVAMILETYDFP 306

Query: 300 PYEGLLDAHALWHATTIPLTYIWWSFIRDDAEFRTSIRVKKAK 342
           PY G +DAHA+W+A  IPLT++WWS+IRDDAEFRTS  +KK K
Sbjct: 307 PYMGYVDAHAVWNAANIPLTFLWWSYIRDDAEFRTSALLKKVK 349


>Medtr6g078860.1 | post-GPI attachment-like factor-protein | HC |
           chr6:29660785-29656451 | 20130731
          Length = 255

 Score =  425 bits (1092), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 203/250 (81%), Positives = 220/250 (88%), Gaps = 1/250 (0%)

Query: 5   YVFAFLLVLS-WSVEVIDASAGDVDPRYRDCIRQCQETGCVAQSCFPHCKFPSDGEHFDR 63
           +VF+F LVLS  SV V+DAS GD  P YR CIRQC+ETGCV   CFP C F SDGE   R
Sbjct: 4   FVFSFFLVLSCLSVIVVDASKGDAHPLYRSCIRQCEETGCVGPKCFPQCSFSSDGELVGR 63

Query: 64  PWYMQEPLYLQWKKWDCQNDCRYHCMLDREKERKLLNLVPVKYHGKWPFARIYGMQEAAS 123
           PWY+QEPLYLQWKKWDC +DCRY+CMLDREKE++LLN  PVKYHGKWPF RIYGMQE AS
Sbjct: 64  PWYIQEPLYLQWKKWDCLSDCRYYCMLDREKEKELLNHDPVKYHGKWPFKRIYGMQEPAS 123

Query: 124 VAFSALNLAMHFHGWVSFFILLYYKLPLKDGKEAYYEYAGLWHIYGLLSLNSWFWSAVFH 183
           VAFSALNLAMHFHGWVSFFI+LYYKLPLKDGK+AYYEYA LWHIY   SLNSW WSAVFH
Sbjct: 124 VAFSALNLAMHFHGWVSFFIVLYYKLPLKDGKKAYYEYASLWHIYAFFSLNSWLWSAVFH 183

Query: 184 SRDVDLTETLDYSSAVILLGYSLILAILRSFNVRDEATRVMVSAPLIAFVITHVMYINFY 243
           SRDVD+TE LDYSSAVILLGYSLILAILRSFN+RDEATRVMVSAPLIAFVITHVMY+NFY
Sbjct: 184 SRDVDVTEKLDYSSAVILLGYSLILAILRSFNIRDEATRVMVSAPLIAFVITHVMYLNFY 243

Query: 244 KLDYGWNMIV 253
           KLDYG +++V
Sbjct: 244 KLDYGKSLLV 253


>Medtr6g078853.1 | post-GPI attachment-like factor-protein | HC |
           chr6:29651004-29650399 | 20130731
          Length = 125

 Score =  155 bits (392), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 73/86 (84%), Positives = 79/86 (91%)

Query: 257 MAVVQLVIWAVWAGLSGHPSRWKLWLVVIAGGLAMLLEIYDFPPYEGLLDAHALWHATTI 316
           MAV QL IWAVWAG+S HPSRWKLWLVVI+GGLAMLLEIYDFPPYEG LDAHA+WHATTI
Sbjct: 1   MAVAQLTIWAVWAGVSRHPSRWKLWLVVISGGLAMLLEIYDFPPYEGFLDAHAIWHATTI 60

Query: 317 PLTYIWWSFIRDDAEFRTSIRVKKAK 342
           PLTY+WWSFIRDDAEFRT+  +KKA 
Sbjct: 61  PLTYVWWSFIRDDAEFRTARFLKKAN 86