Miyakogusa Predicted Gene

Lj3g3v0370440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0370440.1 Non Characterized Hit- tr|A5C639|A5C639_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.49,1e-17,DUF936,Protein of unknown function DUF936, plant;
FAMILY NOT NAMED,NULL,CUFF.40844.1
         (199 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g099095.1 | DUF936 family protein | HC | chr2:42469319-424...   289   1e-78
Medtr4g068050.1 | DUF936 family protein | HC | chr4:25499155-254...   260   7e-70

>Medtr2g099095.1 | DUF936 family protein | HC |
           chr2:42469319-42464410 | 20130731
          Length = 742

 Score =  289 bits (739), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 159/199 (79%), Positives = 175/199 (87%), Gaps = 3/199 (1%)

Query: 2   IAESLSKPIPDGSSPDYERSKLEEALKLKSERQKHASSWVQAALATNLSSFAVFTREPQS 61
           IAESLSKPIPDGSSPD+E+SK+EEALKLK++RQKHA+SWV AALATNLSSFAVFT+E Q 
Sbjct: 487 IAESLSKPIPDGSSPDHEKSKVEEALKLKTDRQKHAASWVHAALATNLSSFAVFTKESQQ 546

Query: 62  SKLPASSNSQNQKTLMGNQPMLVLHNSSSEDSSSKVPGKTRQPLYSKHASQGAT-RKPGD 120
           SKLPASSNSQNQKT +G QP LVLHN SSEDSSSKV  KTR  + SK  SQG   RK  D
Sbjct: 547 SKLPASSNSQNQKTSVGIQPALVLHN-SSEDSSSKVRVKTRPTVSSKLVSQGIIPRKSTD 605

Query: 121 GSANRHKQLVQPPLPEWVRGNGLDEVVNLAEMLQLQSRDWFVGFVERFLDIDGDNTLSDN 180
           GSAN HKQL+QPP PEWVRG+GLDEVV+LA+ML+LQSRDWF+GFVERFLD D D TLSDN
Sbjct: 606 GSANGHKQLMQPP-PEWVRGSGLDEVVDLADMLELQSRDWFLGFVERFLDSDDDTTLSDN 664

Query: 181 GQIAGMLSQLKSVNDWLDE 199
           GQIAGML+QLKSVNDWLDE
Sbjct: 665 GQIAGMLTQLKSVNDWLDE 683


>Medtr4g068050.1 | DUF936 family protein | HC |
           chr4:25499155-25494660 | 20130731
          Length = 727

 Score =  260 bits (664), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 137/202 (67%), Positives = 162/202 (80%), Gaps = 4/202 (1%)

Query: 1   MIAESLSKPIPDGSSPDYERSKLEEALKLKSERQKHASSWVQAALATNLSSFAVFTREPQ 60
           MI++SLSK IPDGSSPD ER   EEA KLKS+RQK A+SWVQAAL+TNLSSF+V+ REPQ
Sbjct: 472 MISDSLSKTIPDGSSPDNERITTEEAQKLKSDRQKLAASWVQAALSTNLSSFSVYNREPQ 531

Query: 61  SSKLPAS--SNSQNQKTLMGNQPMLVLHNSSSEDSSSKVPGKTRQPLY-SKHASQGATRK 117
           SSKLP S  S+SQNQK+++G++P+LVL NS  ED+S K  GKTR  +  SK A QG  RK
Sbjct: 532 SSKLPVSTTSSSQNQKSVLGSKPILVLENSR-EDASMKANGKTRPAVANSKQALQGTPRK 590

Query: 118 PGDGSANRHKQLVQPPLPEWVRGNGLDEVVNLAEMLQLQSRDWFVGFVERFLDIDGDNTL 177
            GD  +N  KQL Q PL EW+RGN LD  VNLA+MLQL+SRDWF+ FVE+FLD DGD  L
Sbjct: 591 QGDAISNPKKQLGQQPLQEWIRGNDLDAAVNLADMLQLRSRDWFLLFVEKFLDSDGDIGL 650

Query: 178 SDNGQIAGMLSQLKSVNDWLDE 199
           S+NGQIAG+L+QLKSVNDWLDE
Sbjct: 651 SNNGQIAGILTQLKSVNDWLDE 672