Miyakogusa Predicted Gene

Lj3g3v0370430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0370430.1 tr|Q9FRR2|Q9FRR2_ARATH At1g08760 OS=Arabidopsis
thaliana GN=At1g08760 PE=2 SV=1,47.66,3e-19,seg,NULL; DUF936,Protein
of unknown function DUF936, plant,CUFF.40842.1
         (204 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g099095.1 | DUF936 family protein | HC | chr2:42469319-424...   216   1e-56
Medtr4g068050.1 | DUF936 family protein | HC | chr4:25499155-254...   166   2e-41

>Medtr2g099095.1 | DUF936 family protein | HC |
           chr2:42469319-42464410 | 20130731
          Length = 742

 Score =  216 bits (550), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/182 (65%), Positives = 134/182 (73%), Gaps = 14/182 (7%)

Query: 23  FEKFANGVKQQQAKVSGKRVEKVTANXXXXXXXXXXXXXXXXXXXNPIRNWMQGIDLGAK 82
           FEKFANGVKQQ+AKV GK VEKV A                    NPIRN +QG D GAK
Sbjct: 242 FEKFANGVKQQRAKVGGKGVEKVEAGKGGKKIVMG----------NPIRNLVQGFDFGAK 291

Query: 83  VLRKSWEGNMEVKTRESPRARGAAKVDPKPEVRSSTPRRSFSNGKLPSKEVQAPTKSSKD 142
            LRKSWEGNMEVKT++S + +G +K     EV SSTPRRS  + KLPS+EV+AP K SK+
Sbjct: 292 ALRKSWEGNMEVKTKDSSKIKGVSKA----EVHSSTPRRSIPSAKLPSREVKAPVKPSKE 347

Query: 143 EHKTQMSIKKATANGTLEEQEKSSKQRTSIGKKSAEVANHGLPGNLVKVSLNSRKVTDAS 202
           E K QMSIKK TAN T EE EKSSKQRTSIGKKSAEV+N+GLPGN+VKVSL SRKVTDAS
Sbjct: 348 EQKPQMSIKKVTANRTSEEHEKSSKQRTSIGKKSAEVSNNGLPGNMVKVSLGSRKVTDAS 407

Query: 203 VQ 204
           VQ
Sbjct: 408 VQ 409


>Medtr4g068050.1 | DUF936 family protein | HC |
           chr4:25499155-25494660 | 20130731
          Length = 727

 Score =  166 bits (419), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/189 (52%), Positives = 126/189 (66%), Gaps = 11/189 (5%)

Query: 23  FEKFANGVKQQQAKVSG--KRVEKVTANXXXXXXXXXXXXXXXXXXXNPIRNWMQGIDLG 80
           FEKF+NGVKQQ   ++G  + + KV                      N IRN +QGI+LG
Sbjct: 211 FEKFSNGVKQQ-GNINGVDRLIAKVGVVETGKGVRGVSPLGKRMAVGNSIRNLVQGIELG 269

Query: 81  AKVLRKSWEGNMEVKT-RESPRARGAAKVDPKPEVRSSTPRRSFSNGKLPSKEV----QA 135
           AK LRKSWEGNMEVK  +E+ ++R ++K D KPE RS+TPR+S S+ K  SK+     Q 
Sbjct: 270 AKALRKSWEGNMEVKNNKETSKSRVSSKFDSKPEFRSTTPRKSTSSEKFTSKDYESKTQT 329

Query: 136 PTKSSKDEHKTQMSIKKATANGTLEEQEKSSKQRTSIGKKSAEVANHGLPGNLVKVSLNS 195
           PTKSSK+E+K Q SIKK   +G +EEQEK++K R S GKKS+E    GLPGN VKVS+NS
Sbjct: 330 PTKSSKEENKIQKSIKKVNGDGIMEEQEKATKPRNSFGKKSSEA---GLPGNFVKVSINS 386

Query: 196 RKVTDASVQ 204
           +KVT+ASVQ
Sbjct: 387 KKVTEASVQ 395