Miyakogusa Predicted Gene

Lj3g3v0338910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0338910.1 tr|G7IS24|G7IS24_MEDTR Threonine synthase
OS=Medicago truncatula GN=MTR_2g099510 PE=4 SV=1,91.23,0,Tryptophan
synthase beta subunit-like PLP-dependent enzymes,Tryptophan synthase
beta subunit-like PL,NODE_32551_length_1834_cov_198.504913.path2.1
         (342 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g099510.1 | threonine synthase-like protein | HC | chr2:42...   651   0.0  
Medtr4g125700.1 | threonine synthase-like protein | HC | chr4:52...   593   e-170
Medtr5g098840.1 | threonine synthase, putative | HC | chr5:43282...    67   3e-11

>Medtr2g099510.1 | threonine synthase-like protein | HC |
           chr2:42662776-42664825 | 20130731
          Length = 532

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/342 (91%), Positives = 322/342 (94%)

Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVIGVGCASTGDTSAALSAYCAS 60
           M+DLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPV+GVGCASTGDTSAALSAYCAS
Sbjct: 191 MSDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAALSAYCAS 250

Query: 61  AGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMNLIREVTAEHPIYLANSLNS 120
           AGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCM LIREVTAE PIYLANSLNS
Sbjct: 251 AGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLNS 310

Query: 121 LRLEGQKNAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDKIPRLVCA 180
           LRLEGQK AAIEILQQFDWQVPDWVI+PGGNLGNIYAFYKGF MC+ELGLVD+IPRLVCA
Sbjct: 311 LRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFHMCRELGLVDRIPRLVCA 370

Query: 181 QAANANPLYTYFKSGWKEVQPMTAKKNFASAIQNGDPVSIDRAVLALKNSNGIVEEATEE 240
           QAANANPLY YFKSGWKE + + A+  FASAIQ GDPVSIDRAV ALKN NGIVEEATEE
Sbjct: 371 QAANANPLYLYFKSGWKEFKAVRAQTTFASAIQIGDPVSIDRAVHALKNCNGIVEEATEE 430

Query: 241 ELMDAMAQADSTGMFACPHTGVALAALFKLRNSGVIKPTDRTVVVSTAHGLKFTQSKIDY 300
           ELMDAMAQADSTGMF CPHTGVAL ALFKLRNSGVIKPTDRTVVVSTAHGLKFTQSKIDY
Sbjct: 431 ELMDAMAQADSTGMFTCPHTGVALTALFKLRNSGVIKPTDRTVVVSTAHGLKFTQSKIDY 490

Query: 301 HSGHIKDMACQFANPPLQVKADFGSVMDVLKKYLKSKAPKNH 342
           HS  IKD+ACQFANPP QVKADFGSVMDVL KYL+SKAPK H
Sbjct: 491 HSKGIKDLACQFANPPTQVKADFGSVMDVLSKYLQSKAPKYH 532


>Medtr4g125700.1 | threonine synthase-like protein | HC |
           chr4:52164881-52166971 | 20130731
          Length = 508

 Score =  593 bits (1529), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 283/340 (83%), Positives = 310/340 (91%), Gaps = 1/340 (0%)

Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVIGVGCASTGDTSAALSAYCAS 60
           MNDLWVKHCG SHTGSFKDLGMTVLVSQVNRLRKMNRP++GVGCASTGDTSAALSAYCAS
Sbjct: 170 MNDLWVKHCGNSHTGSFKDLGMTVLVSQVNRLRKMNRPLVGVGCASTGDTSAALSAYCAS 229

Query: 61  AGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMNLIREVTAEHPIYLANSLNS 120
           AGIPSIVFLPAN+IS AQL+QP++NGA VLSIDTDFDGCM LIRE+T+E PIYLANSLNS
Sbjct: 230 AGIPSIVFLPANKISTAQLIQPVSNGALVLSIDTDFDGCMKLIREITSELPIYLANSLNS 289

Query: 121 LRLEGQKNAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDKIPRLVCA 180
           LR+EGQK AAIEILQQFDWQVPDWVI+PGGNLGNIYAFYKGF+MCK+LGLVDKIPRLVCA
Sbjct: 290 LRIEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCKDLGLVDKIPRLVCA 349

Query: 181 QAANANPLYTYFKSGWKEVQPMTAKKNFASAIQNGDPVSIDRAVLALKNSNGIVEEATEE 240
           QAANANPLY Y+K+GWKE + + A+  FASAIQ GDPVSIDRAV ALKNS+GIVEEA+EE
Sbjct: 350 QAANANPLYLYYKNGWKEFKAIKAETTFASAIQIGDPVSIDRAVYALKNSDGIVEEASEE 409

Query: 241 ELMDAMAQADSTGMFACPHTGVALAALFKLRNSGVIKPTDRTVVVSTAHGLKFTQSKIDY 300
           ELMDAMA ADSTGMF CPHTGVAL AL KLRN+GVI  ++R VVVSTAHGLKF  SKIDY
Sbjct: 410 ELMDAMALADSTGMFICPHTGVALTALIKLRNNGVIGASERVVVVSTAHGLKFADSKIDY 469

Query: 301 HSGHIKDMACQFANPPLQVKADFGSVMDVLKKYLKSKAPK 340
           HSG+I  +  +FANPP+ VKADFGSVMDVLK +L SKAPK
Sbjct: 470 HSGNIAGIG-RFANPPVSVKADFGSVMDVLKDFLLSKAPK 508


>Medtr5g098840.1 | threonine synthase, putative | HC |
           chr5:43282708-43282202 | 20130731
          Length = 60

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 39/63 (61%), Gaps = 16/63 (25%)

Query: 280 DRTVVVSTAHGLKFTQSKIDYHSGHIKDMACQFANPPLQVKADFGSVMDVLKKYLKSKAP 339
           DRTVVVST                 IKD+ACQFA PPLQV ADFGSVM+ L KYL+SKA 
Sbjct: 14  DRTVVVSTG----------------IKDLACQFAYPPLQVNADFGSVMNFLSKYLQSKAL 57

Query: 340 KNH 342
             H
Sbjct: 58  NYH 60