Miyakogusa Predicted Gene

Lj3g3v0336700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0336700.1 tr|G7IS24|G7IS24_MEDTR Threonine synthase
OS=Medicago truncatula GN=MTR_2g099510 PE=4 SV=1,84.14,0,thrC:
threonine synthase,Threonine synthase-like; PALP,Tryptophan synthase
beta subunit-like PLP-dep,CUFF.40632.1
         (527 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g099510.1 | threonine synthase-like protein | HC | chr2:42...   892   0.0  
Medtr4g125700.1 | threonine synthase-like protein | HC | chr4:52...   800   0.0  
Medtr5g098840.1 | threonine synthase, putative | HC | chr5:43282...    67   4e-11

>Medtr2g099510.1 | threonine synthase-like protein | HC |
           chr2:42662776-42664825 | 20130731
          Length = 532

 Score =  892 bits (2304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/466 (91%), Positives = 443/466 (95%), Gaps = 3/466 (0%)

Query: 62  IRDEARRKKISTGDRHLFSAKYVPFNADPSSTESYSLDEVVYRSQSGGLLDVQHDIAALK 121
           IRDEARRK +S   +HLFSAKYVPFNADPSSTESYSLDE+VYRSQSG LLDVQHD+ ALK
Sbjct: 70  IRDEARRKNVS---QHLFSAKYVPFNADPSSTESYSLDEIVYRSQSGDLLDVQHDLTALK 126

Query: 122 AFDGEHWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGK 181
            FDG +WRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGK
Sbjct: 127 KFDGAYWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGK 186

Query: 182 RFVDMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVIGVGCASTGDTSAALSA 241
           +F+ M+DLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPV+GVGCASTGDTSAALSA
Sbjct: 187 QFLGMSDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAALSA 246

Query: 242 YCASAGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELPIYLAN 301
           YCASAGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCM LIREVTAELPIYLAN
Sbjct: 247 YCASAGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLAN 306

Query: 302 SLNSLRLEGQKTAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDKIPR 361
           SLNSLRLEGQKTAAIEILQQFDWQVPDWVI+PGGNLGNIYAFYKGF MC+ELGLVD+IPR
Sbjct: 307 SLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFHMCRELGLVDRIPR 366

Query: 362 LVCAQAANANPLYTYFKSGWKEFQPMTAKTTFASAIQIGDPVSIDRAVLALKNSNGIVEE 421
           LVCAQAANANPLY YFKSGWKEF+ + A+TTFASAIQIGDPVSIDRAV ALKN NGIVEE
Sbjct: 367 LVCAQAANANPLYLYFKSGWKEFKAVRAQTTFASAIQIGDPVSIDRAVHALKNCNGIVEE 426

Query: 422 ATEEELMDAMAQADSTGMFACPHTGVALAALFKLRNSGVIKPTDRTVVVSTAHGLKFTQS 481
           ATEEELMDAMAQADSTGMF CPHTGVAL ALFKLRNSGVIKPTDRTVVVSTAHGLKFTQS
Sbjct: 427 ATEEELMDAMAQADSTGMFTCPHTGVALTALFKLRNSGVIKPTDRTVVVSTAHGLKFTQS 486

Query: 482 KIDYHSGHIKDMACQFANPPLQVKADFGSVMDVLKKYLKSKAPKNH 527
           KIDYHS  IKD+ACQFANPP QVKADFGSVMDVL KYL+SKAPK H
Sbjct: 487 KIDYHSKGIKDLACQFANPPTQVKADFGSVMDVLSKYLQSKAPKYH 532


>Medtr4g125700.1 | threonine synthase-like protein | HC |
           chr4:52164881-52166971 | 20130731
          Length = 508

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/464 (82%), Positives = 419/464 (90%), Gaps = 4/464 (0%)

Query: 62  IRDEARRKKISTGDRHLFSAKYVPFNADPSSTESYSLDEVVYRSQSGGLLDVQHDIAALK 121
           I+D ARR   ++ +   F+AKYVPFN+   S ESYSLDE+VYRS SGGLLDV HDI AL 
Sbjct: 49  IKDIARRHPATSNN---FTAKYVPFNSTFDSPESYSLDEIVYRSNSGGLLDVHHDIEALA 105

Query: 122 AFDGEHWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGK 181
            FDG +WRNLFDSRVGKTTWPYGSGVWSKKEWVLPEI  DDIVSAFEGNSNLFWAERFGK
Sbjct: 106 KFDGAYWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIHPDDIVSAFEGNSNLFWAERFGK 165

Query: 182 RFVDMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVIGVGCASTGDTSAALSA 241
           +FV MNDLWVKHCG SHTGSFKDLGMTVLVSQVNRLRKMNRP++GVGCASTGDTSAALSA
Sbjct: 166 QFVGMNDLWVKHCGNSHTGSFKDLGMTVLVSQVNRLRKMNRPLVGVGCASTGDTSAALSA 225

Query: 242 YCASAGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELPIYLAN 301
           YCASAGIPSIVFLPAN+IS AQL+QP++NGA VLSIDTDFDGCM LIRE+T+ELPIYLAN
Sbjct: 226 YCASAGIPSIVFLPANKISTAQLIQPVSNGALVLSIDTDFDGCMKLIREITSELPIYLAN 285

Query: 302 SLNSLRLEGQKTAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDKIPR 361
           SLNSLR+EGQKTAAIEILQQFDWQVPDWVI+PGGNLGNIYAFYKGF+MCK+LGLVDKIPR
Sbjct: 286 SLNSLRIEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCKDLGLVDKIPR 345

Query: 362 LVCAQAANANPLYTYFKSGWKEFQPMTAKTTFASAIQIGDPVSIDRAVLALKNSNGIVEE 421
           LVCAQAANANPLY Y+K+GWKEF+ + A+TTFASAIQIGDPVSIDRAV ALKNS+GIVEE
Sbjct: 346 LVCAQAANANPLYLYYKNGWKEFKAIKAETTFASAIQIGDPVSIDRAVYALKNSDGIVEE 405

Query: 422 ATEEELMDAMAQADSTGMFACPHTGVALAALFKLRNSGVIKPTDRTVVVSTAHGLKFTQS 481
           A+EEELMDAMA ADSTGMF CPHTGVAL AL KLRN+GVI  ++R VVVSTAHGLKF  S
Sbjct: 406 ASEEELMDAMALADSTGMFICPHTGVALTALIKLRNNGVIGASERVVVVSTAHGLKFADS 465

Query: 482 KIDYHSGHIKDMACQFANPPLQVKADFGSVMDVLKKYLKSKAPK 525
           KIDYHSG+I  +  +FANPP+ VKADFGSVMDVLK +L SKAPK
Sbjct: 466 KIDYHSGNIAGIG-RFANPPVSVKADFGSVMDVLKDFLLSKAPK 508


>Medtr5g098840.1 | threonine synthase, putative | HC |
           chr5:43282708-43282202 | 20130731
          Length = 60

 Score = 67.4 bits (163), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/63 (57%), Positives = 39/63 (61%), Gaps = 16/63 (25%)

Query: 465 DRTVVVSTAHGLKFTQSKIDYHSGHIKDMACQFANPPLQVKADFGSVMDVLKKYLKSKAP 524
           DRTVVVST                 IKD+ACQFA PPLQV ADFGSVM+ L KYL+SKA 
Sbjct: 14  DRTVVVSTG----------------IKDLACQFAYPPLQVNADFGSVMNFLSKYLQSKAL 57

Query: 525 KNH 527
             H
Sbjct: 58  NYH 60