Miyakogusa Predicted Gene

Lj3g3v0323310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0323310.1 Non Characterized Hit- tr|K4BMX8|K4BMX8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,39.1,2e-18,seg,NULL,CUFF.40509.1
         (139 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g099810.1 | epidermal patterning factor-like protein | HC ...   149   1e-36
Medtr8g017850.1 | epidermal patterning factor-like protein | HC ...   139   7e-34
Medtr2g039920.1 | hypothetical protein | LC | chr2:17500449-1750...    74   5e-14
Medtr3g087020.1 | epidermal patterning factor-like protein | HC ...    59   1e-09
Medtr3g110550.1 | epidermal patterning factor-like protein, puta...    58   3e-09
Medtr4g097720.1 | epidermal patterning factor-like protein | HC ...    55   2e-08
Medtr8g090010.1 | transmembrane protein, putative | HC | chr8:37...    55   3e-08
Medtr5g014840.1 | epidermal patterning factor-like protein | HC ...    53   8e-08
Medtr4g037115.1 | epidermal patterning factor-like protein | LC ...    53   9e-08
Medtr1g102940.1 | epidermal patterning factor-like protein | HC ...    47   8e-06

>Medtr2g099810.1 | epidermal patterning factor-like protein | HC |
           chr2:42823251-42824486 | 20130731
          Length = 128

 Score =  149 bits (375), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 79/136 (58%), Positives = 94/136 (69%), Gaps = 10/136 (7%)

Query: 4   GRLFCFMVALQIMSCCVSVTSRPFSPTDDLSHPAGPKQVPAPESSPPYTIESEKGLMVRE 63
           GRLFCF++ALQ++S  VSV  R F  TD +SHP GP + PAP      TIES+K   ++E
Sbjct: 3   GRLFCFILALQLLSS-VSVAKRAFPSTDAMSHP-GPGEAPAPHQ----TIESKKSEKMKE 56

Query: 64  KMTERMKEEAYYDRRIGSSPPSCEHKCYGCTPCEAIQVPSTXXXXXXXXXXXLGIQYANY 123
            + +  ++      +IGSSPPSCEHKCYGC PCEAIQVPST           LG+QYANY
Sbjct: 57  VVYDDDRDIGISSNKIGSSPPSCEHKCYGCNPCEAIQVPST----ESSKRNHLGLQYANY 112

Query: 124 EPESWKCKCGPSFYSP 139
           EPESWKCKCGPSFYSP
Sbjct: 113 EPESWKCKCGPSFYSP 128


>Medtr8g017850.1 | epidermal patterning factor-like protein | HC |
           chr8:6025784-6026335 | 20130731
          Length = 129

 Score =  139 bits (351), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 83/141 (58%), Positives = 94/141 (66%), Gaps = 19/141 (13%)

Query: 4   GRLFCFMVALQIMSCCVSVTSRPFSPTDDLSHPAGPKQVPAPESSPPYTIESEK--GLMV 61
           GRLF F++ LQI+S  V V  RPF  T  +SH A   Q  A +SSPPYTIES+K  G+M 
Sbjct: 3   GRLFFFLLTLQIVSL-VCVAKRPFLSTHGISHSA---QENASKSSPPYTIESKKLKGIMG 58

Query: 62  REKMTERMKEEAYYDR---RIGSSPPSCEHKCYGCTPCEAIQVPSTXXXXXXXXXXXLGI 118
           +E M++  K E   DR   +IGSSPPSCEHKCY C PCEA QVPS            LGI
Sbjct: 59  KEGMSK--KREVENDREVSKIGSSPPSCEHKCYDCFPCEATQVPSRTSH--------LGI 108

Query: 119 QYANYEPESWKCKCGPSFYSP 139
            YANYEPESWKCKCGPSFYSP
Sbjct: 109 MYANYEPESWKCKCGPSFYSP 129


>Medtr2g039920.1 | hypothetical protein | LC |
           chr2:17500449-17501562 | 20130731
          Length = 127

 Score = 73.6 bits (179), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 8/62 (12%)

Query: 78  RIGSSPPSCEHKCYGCTPCEAIQVPSTXXXXXXXXXXXLGIQYANYEPESWKCKCGPSFY 137
           RIGS+PP CEHKC GC PC   Q P+            +G+QYANYEPE WKC CG S++
Sbjct: 74  RIGSTPPRCEHKCGGCIPCNPTQKPTNKHL--------IGVQYANYEPEGWKCMCGTSYF 125

Query: 138 SP 139
           +P
Sbjct: 126 NP 127


>Medtr3g087020.1 | epidermal patterning factor-like protein | HC |
           chr3:39454024-39454681 | 20130731
          Length = 121

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 24/102 (23%)

Query: 50  PYTIESEKGLMVREKMTERMKEEAYYDRRIGSSPPSCEHKCYGCTPCEAIQVPSTXXX-- 107
           P++    +GL+  EK             R+GS+PP+C +KC  C PC A+QVPS      
Sbjct: 32  PHSAIPPRGLLFEEK------------NRLGSAPPTCHNKCNQCHPCMAVQVPSHEHVQP 79

Query: 108 -XXXXXXXXLGIQ---------YANYEPESWKCKCGPSFYSP 139
                     G+          Y+NY+P SWKC CG +F++P
Sbjct: 80  GHTASTSSTEGVNFFLQGNNNGYSNYKPLSWKCHCGGNFFNP 121


>Medtr3g110550.1 | epidermal patterning factor-like protein,
           putative | HC | chr3:51679203-51679793 | 20130731
          Length = 130

 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 19/91 (20%)

Query: 56  EKGLMVREKMTERMKEEAYYDRRIGSSPPSCEHKCYGCTPCEAIQVPST-------XXXX 108
           E G M+ EK+            +IGS PP CE +C  C  CEA+QVP             
Sbjct: 52  ENGSMLAEKL------------QIGSRPPKCERRCRSCVHCEAVQVPIVPSKVQIHRSHY 99

Query: 109 XXXXXXXLGIQYANYEPESWKCKCGPSFYSP 139
                   G   +NY+P SWKCKCG  F++P
Sbjct: 100 DSAAYSSRGDGLSNYKPISWKCKCGDYFFNP 130


>Medtr4g097720.1 | epidermal patterning factor-like protein | HC |
           chr4:40341547-40342092 | 20130731
          Length = 121

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 8/78 (10%)

Query: 70  KEEAYYDRRIGSSPPSCEHKCYGCTPCEAIQVPST--------XXXXXXXXXXXLGIQYA 121
           +E+     +IGS PP C+ +C  C  CEAIQVP+                     G   +
Sbjct: 44  EEKMILRAQIGSRPPKCDRRCRSCGHCEAIQVPTNPQVQNVKINSSKFSSIAYSRGNYNS 103

Query: 122 NYEPESWKCKCGPSFYSP 139
           NY+P SWKCKCG   ++P
Sbjct: 104 NYKPMSWKCKCGNLIFNP 121


>Medtr8g090010.1 | transmembrane protein, putative | HC |
           chr8:37665928-37666504 | 20130731
          Length = 123

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 12/75 (16%)

Query: 77  RRIGSSPPSCEHKCYGCTPCEAIQVPS-----------TXXXXXXXXXXXLGI-QYANYE 124
            R+GS PPSC  KC  C PC A+QVPS                       LG  +Y+NY+
Sbjct: 49  NRLGSMPPSCHSKCNECHPCMAVQVPSLPRQDSVPSKVASMKKWLSPSLQLGNSRYSNYK 108

Query: 125 PESWKCKCGPSFYSP 139
           P  WKC CG  F++P
Sbjct: 109 PLGWKCHCGDHFFNP 123


>Medtr5g014840.1 | epidermal patterning factor-like protein | HC |
           chr5:5042120-5040915 | 20130731
          Length = 131

 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 16/101 (15%)

Query: 55  SEKGLMV--REKMTERMKEEAYYD------RRIGSSPPSCEHKCYGCTPCEAIQVPST-- 104
           ++KGL+   R+ + +    +   D      ++IGS PP C+ +C  C  CEAIQVP    
Sbjct: 31  TQKGLVTEGRKTLNQNGFHQTLGDNKVMVRKQIGSRPPKCDTRCRFCGHCEAIQVPENPR 90

Query: 105 XXXXXXXXXXXLGIQYA------NYEPESWKCKCGPSFYSP 139
                        + YA      NY+P SWKCKCG   ++P
Sbjct: 91  AMTGKINPSTLSTVAYARRQDNSNYKPMSWKCKCGDIIFNP 131


>Medtr4g037115.1 | epidermal patterning factor-like protein | LC |
           chr4:13644209-13645235 | 20130731
          Length = 130

 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 18/95 (18%)

Query: 51  YTIESEKGLMVREKMTERMKEEA--YYDRRI----GSSPPSCEHKCYGCTPCEAIQVPST 104
           Y I+++    + ++M  + K E      RR+    GS PP+C ++C  CTPC+ + VP+ 
Sbjct: 47  YAIDNQYVNKIGQEMLSKKKSEKTKVLSRRLLSITGSHPPNCINRCDNCTPCKRVIVPTH 106

Query: 105 XXXXXXXXXXXLGIQYANYEPESWKCKCGPSFYSP 139
                         Q A Y P SWKCKCG   Y P
Sbjct: 107 PP------------QSAGYYPTSWKCKCGNKLYLP 129


>Medtr1g102940.1 | epidermal patterning factor-like protein | HC |
           chr1:46537048-46538104 | 20130731
          Length = 122

 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 13/99 (13%)

Query: 44  APESSPPYTIESEKGLMVREKMTERMKEEAYYDRRI---GSSPPSCEHKCYGCTPCEAIQ 100
           AP+ S   T+   + +      +   K E    +++   GS+PPSC  KC  C PC+ ++
Sbjct: 34  APQPSSSGTVLKHQKMENGSPTSPWKKREVVEQKKLAGPGSTPPSCRSKCSSCNPCQPVR 93

Query: 101 VPSTXXXXXXXXXXXLGIQYANYEPESWKCKCGPSFYSP 139
           +P               I    Y PE+W+CKCG  ++ P
Sbjct: 94  MPVHPGL----------IIRLEYYPEAWRCKCGNKYFLP 122