Miyakogusa Predicted Gene
- Lj3g3v0323230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0323230.1 Non Characterized Hit- tr|I3SQ70|I3SQ70_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.38,0,coiled-coil,NULL; NAP-like,NULL; seg,NULL; NAP,Nucleosome
assembly protein (NAP); NUCLEOSOME ASSEMBL,CUFF.40528.1
(370 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g099940.1 | nucleosome assembly protein | HC | chr2:428670... 385 e-107
Medtr2g039680.2 | nucleosome assembly protein | HC | chr2:173935... 357 1e-98
Medtr2g039680.1 | nucleosome assembly protein | HC | chr2:173935... 356 2e-98
Medtr2g039697.1 | nucleosome assembly protein | LC | chr2:174078... 266 2e-71
Medtr2g039700.1 | nucleosome assembly protein | LC | chr2:174129... 244 9e-65
Medtr3g040400.1 | nucleosome/chromatin assembly factor group pro... 59 1e-08
Medtr4g108570.2 | nucleosome/chromatin assembly factor group pro... 58 2e-08
Medtr4g108570.1 | nucleosome/chromatin assembly factor group pro... 58 2e-08
>Medtr2g099940.1 | nucleosome assembly protein | HC |
chr2:42867059-42870999 | 20130731
Length = 367
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/353 (58%), Positives = 229/353 (64%), Gaps = 4/353 (1%)
Query: 19 EDRAGLVNALKDKLQLLAGKHVDVLETLSPEVRKRVEVLRDIQGEHDELEAKFLEERAQL 78
EDRAGLVNALKDKLQLLAG VDV+ETLSP V++RVEVL+ +Q EHDELE+K+LEERAQL
Sbjct: 18 EDRAGLVNALKDKLQLLAGDRVDVMETLSPNVKQRVEVLKVLQSEHDELESKYLEERAQL 77
Query: 79 EAKYQKLYEPLYKKRYXXXXXXX-XXXXXXXXXXXXXXXXXXXXGVPNFWLNAMKTNETL 137
EAKYQKLYEPLY KRY GVP+FWL AMKTNE L
Sbjct: 78 EAKYQKLYEPLYTKRYEIVNGVIDVEGITNEAGQGEESKAAEEKGVPSFWLTAMKTNEIL 137
Query: 138 AEEITERDEGALKYLQDIKWCKVDEPKGFKLDFYFDSNPYFKNSVLTKTYHMIDEEDPIL 197
EEITERDE ALKYL+DIKW K+D PKGFKL+FYFDSNPYF+NSVLTKTYHMI+++DPIL
Sbjct: 138 GEEITERDEEALKYLKDIKWSKLDNPKGFKLEFYFDSNPYFQNSVLTKTYHMIEDDDPIL 197
Query: 198 EKAIGTEIEWHPXXXXXXXXXXXXXXXXXXXXXXXTKTEKCESFFNFFNPPQVPEXXXXX 257
EK+IGTEIEWHP KTEKC+SFFN FNPP +PE
Sbjct: 198 EKSIGTEIEWHPGKCLTQKVMKKKPKKGSKNAKPIIKTEKCDSFFNIFNPPHIPEDDDEI 257
Query: 258 XXXAVEELQNLMEHDYDIGSTIRDKIIPHAVSWFTGEAEQSDFXXXXXXXXXXXXXXXXX 317
VEELQNLMEHDYDIGSTIRDKIIPHAVSWFTGEA +S
Sbjct: 258 DDDVVEELQNLMEHDYDIGSTIRDKIIPHAVSWFTGEAGES---DFDDIEVDEDDEDGDE 314
Query: 318 XXXXXXXXXXXXXXXXXXXXXXXXXXKSKSKSGSKARPGKDQPTERPPECKQQ 370
KSKSK GSKA+PGKDQ TERP +CKQQ
Sbjct: 315 EDDDDDDDDDDDEEDEDDEEEDEGKGKSKSKRGSKAKPGKDQSTERPADCKQQ 367
>Medtr2g039680.2 | nucleosome assembly protein | HC |
chr2:17393561-17389420 | 20130731
Length = 343
Score = 357 bits (915), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 179/281 (63%), Positives = 203/281 (72%), Gaps = 1/281 (0%)
Query: 19 EDRAGLVNALKDKLQLLAGKHVDVLETLSPEVRKRVEVLRDIQGEHDELEAKFLEERAQL 78
EDRA LVNALK K+Q LAG+H DVLE+LSP VRKRVEVLR+IQGEHDELEAKFLEERA L
Sbjct: 20 EDRADLVNALKSKIQSLAGQHSDVLESLSPVVRKRVEVLREIQGEHDELEAKFLEERAAL 79
Query: 79 EAKYQKLYEPLYKKRYXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPNFWLNAMKTNETLA 138
EAKYQKLY+PLY KRY GVP+FWLNAMK N+ L+
Sbjct: 80 EAKYQKLYQPLYTKRYDIVNGVTEVEGAAMETTADAEEDNEK-GVPSFWLNAMKNNDVLS 138
Query: 139 EEITERDEGALKYLQDIKWCKVDEPKGFKLDFYFDSNPYFKNSVLTKTYHMIDEEDPILE 198
EE+TERDE ALK+L+DIKW ++D+PKGFKL+F+FD+NPYF NS+LTKTYHM+DE++PILE
Sbjct: 139 EEVTERDEAALKFLKDIKWSRIDDPKGFKLEFFFDTNPYFSNSILTKTYHMVDEDEPILE 198
Query: 199 KAIGTEIEWHPXXXXXXXXXXXXXXXXXXXXXXXTKTEKCESFFNFFNPPQVPEXXXXXX 258
KAIGTEI+W P TKTE CESFFNFFNPP+VPE
Sbjct: 199 KAIGTEIQWLPGKCLTQKVLKKKPKKGAKNAKPITKTETCESFFNFFNPPEVPEDDEDID 258
Query: 259 XXAVEELQNLMEHDYDIGSTIRDKIIPHAVSWFTGEAEQSD 299
EELQN ME DYDIGSTIRDKIIPHAVSWFTGEA Q +
Sbjct: 259 EDMAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAAQGE 299
>Medtr2g039680.1 | nucleosome assembly protein | HC |
chr2:17393561-17389420 | 20130731
Length = 368
Score = 356 bits (913), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/281 (63%), Positives = 203/281 (72%), Gaps = 1/281 (0%)
Query: 19 EDRAGLVNALKDKLQLLAGKHVDVLETLSPEVRKRVEVLRDIQGEHDELEAKFLEERAQL 78
EDRA LVNALK K+Q LAG+H DVLE+LSP VRKRVEVLR+IQGEHDELEAKFLEERA L
Sbjct: 20 EDRADLVNALKSKIQSLAGQHSDVLESLSPVVRKRVEVLREIQGEHDELEAKFLEERAAL 79
Query: 79 EAKYQKLYEPLYKKRYXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPNFWLNAMKTNETLA 138
EAKYQKLY+PLY KRY GVP+FWLNAMK N+ L+
Sbjct: 80 EAKYQKLYQPLYTKRYDIVNGVTEVEGAAMETTADAEEDNEK-GVPSFWLNAMKNNDVLS 138
Query: 139 EEITERDEGALKYLQDIKWCKVDEPKGFKLDFYFDSNPYFKNSVLTKTYHMIDEEDPILE 198
EE+TERDE ALK+L+DIKW ++D+PKGFKL+F+FD+NPYF NS+LTKTYHM+DE++PILE
Sbjct: 139 EEVTERDEAALKFLKDIKWSRIDDPKGFKLEFFFDTNPYFSNSILTKTYHMVDEDEPILE 198
Query: 199 KAIGTEIEWHPXXXXXXXXXXXXXXXXXXXXXXXTKTEKCESFFNFFNPPQVPEXXXXXX 258
KAIGTEI+W P TKTE CESFFNFFNPP+VPE
Sbjct: 199 KAIGTEIQWLPGKCLTQKVLKKKPKKGAKNAKPITKTETCESFFNFFNPPEVPEDDEDID 258
Query: 259 XXAVEELQNLMEHDYDIGSTIRDKIIPHAVSWFTGEAEQSD 299
EELQN ME DYDIGSTIRDKIIPHAVSWFTGEA Q +
Sbjct: 259 EDMAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAAQGE 299
>Medtr2g039697.1 | nucleosome assembly protein | LC |
chr2:17407843-17405503 | 20130731
Length = 317
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 174/277 (62%), Gaps = 6/277 (2%)
Query: 21 RAGLVNALKDKLQLLAGKHVDVLE--TLSPEVRKRVEVLRDIQGEHDELEAKFLEERAQL 78
R L K+++Q LAG+ V+ +LSP +KRV+ LR IQ EHDEL+ KFLEERA L
Sbjct: 23 RVDLGEYFKNRIQDLAGQFSRVMGYLSLSPNPKKRVDFLRVIQREHDELKEKFLEERAAL 82
Query: 79 EAKYQKLYEPLYKKRYXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPNFWLNAMKTNETLA 138
EAKYQ LY+PL+ KRY GVP FWL A+K NE +A
Sbjct: 83 EAKYQLLYQPLFAKRYEIVNGLAEVEGVAMGTATDTAEEK---GVPCFWLVALKNNEVVA 139
Query: 139 EEITERDEGALKYLQDIKWCKVDEPKGFKLDFYFDSNPYFKNSVLTKTYHMIDEEDPILE 198
+ IT+RDE ALKYL+DIK+ K+ EP GFKL+F+FD NPYF N+VLTKTYHM+DE++P+LE
Sbjct: 140 DVITDRDEEALKYLKDIKYTKMVEPLGFKLEFFFDPNPYFSNTVLTKTYHMLDEDEPLLE 199
Query: 199 KAIGTEIEWHPXXXXXXXXXXXXXXXXXXXXXXXTKTEKCESFFNFFNPPQVPEXXXXXX 258
+A GT I W P T CESFFNFF+PP++PE
Sbjct: 200 RAFGTVINWLP-EKSLTKIANEKQKNDLKNVEPVIDTPPCESFFNFFDPPEIPENDVDID 258
Query: 259 XXAVEELQNLMEHDYDIGSTIRDKIIPHAVSWFTGEA 295
A ELQ++ME DYDIGSTIRDKIIPHAV WFTGEA
Sbjct: 259 EDACYELQDVMERDYDIGSTIRDKIIPHAVVWFTGEA 295
>Medtr2g039700.1 | nucleosome assembly protein | LC |
chr2:17412959-17410932 | 20130731
Length = 347
Score = 244 bits (623), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 145/279 (51%), Positives = 181/279 (64%), Gaps = 18/279 (6%)
Query: 21 RAGLVNALKD--KLQLLAGKHVDVLETL--SPEVRKRVEVLRDIQGEHDELEAKFLEERA 76
RA V+ L++ +Q L + L+ L SP V KR+EVL++IQ EHD+L+AKF EERA
Sbjct: 28 RADHVDILEELRMIQALTQQRYKALQYLFASPIVEKRLEVLKEIQKEHDDLKAKFFEERA 87
Query: 77 QLEAKYQKLYEPLYKKRYXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPNFWLNAMKTNET 136
LEAKYQ LY+PLY KRY GVP FWL A++ N+
Sbjct: 88 ALEAKYQLLYQPLYTKRYEIVNGLAEVEGADIDEPEVK-------GVPYFWLVALQNNDE 140
Query: 137 LAEEITERDEGALKYLQDIKWCKVDEPKGFKLDFYFDSNPYFKNSVLTKTYHMIDEEDPI 196
+A+EITERDE ALKYL+DIK+ + EP+GFKL+F+FDSNPYF N++LTKTYHM+DE++ I
Sbjct: 141 IADEITERDEDALKYLKDIKYTRTTEPQGFKLEFFFDSNPYFSNTILTKTYHMVDEDEFI 200
Query: 197 LEKAIGTEIEWHPXXXXXXXXXXXXXXXXXXXXXXXTKTEKCESFFNFFNPPQVPEXXXX 256
+EKAIGTEIEW P +TEK +SFFNFFN ++P+
Sbjct: 201 MEKAIGTEIEWLP-------GKSLTEKKDPNTAKQTIETEKFDSFFNFFNSLEIPKDGMG 253
Query: 257 XXXXAVEELQNLMEHDYDIGSTIRDKIIPHAVSWFTGEA 295
A EELQN MEHDYDIGSTIRDKIIP+AVSW+TGEA
Sbjct: 254 VDEEADEELQNEMEHDYDIGSTIRDKIIPNAVSWYTGEA 292
>Medtr3g040400.1 | nucleosome/chromatin assembly factor group
protein | HC | chr3:14196167-14201171 | 20130731
Length = 260
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 44 ETLSPEVRKRVEVLRDIQGEHDELEAKFLEERAQLEAKYQKLYEPLYKKRYXXXXXXXXX 103
E + E+ +E L++IQ E +++ + ++ ++E KY ++ +P+Y KR
Sbjct: 19 EEIDGELVLSIEKLQEIQDEIEKINEEASDKVLEIEQKYNEVRKPVYDKR---------- 68
Query: 104 XXXXXXXXXXXXXXXXXXGVPNFWLNAMKTNETLAEEITERDEGALKYLQDIKW-CKVDE 162
+P+FWL A ++ L + + E D+ K+L ++ D
Sbjct: 69 -------------NDVIKSIPDFWLTAFLSHPVLGDLLNEEDQKIFKHLISLEVEDHKDV 115
Query: 163 PKGFKLDFYFDSNPYFKNSVLTKTYHMIDEEDPILEKAIGTEIEW 207
G+ + F F+SNPYF++S L KT+ ++E K T I+W
Sbjct: 116 KSGYSITFNFNSNPYFEDSKLVKTFTFLEEGTT---KLTATPIKW 157
>Medtr4g108570.2 | nucleosome/chromatin assembly factor group
protein | HC | chr4:44984273-44980061 | 20130731
Length = 266
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 24/145 (16%)
Query: 44 ETLSPEVRKRVEVLRDIQGEHDELEAKFLEERAQLEAKYQKLYEPLYKKRYXXXXXXXXX 103
E + E+ +E L++IQ + +++ + ++ ++E KY ++ +P+Y KR
Sbjct: 16 EEVDAELILSIEKLQEIQDDLEKINDEASDKVLEIEQKYNEIRKPVYDKR---------- 65
Query: 104 XXXXXXXXXXXXXXXXXXGVPNFWLNAMKTNETLAEEITERDEGALKYLQDIKW-CKVDE 162
+P+FWLNA ++ TL+E + + D+ KYL ++ D
Sbjct: 66 -------------NEIIKSIPDFWLNAFLSHPTLSELLNDEDQKIFKYLSSLEVEDNKDV 112
Query: 163 PKGFKLDFYFDSNPYFKNSVLTKTY 187
G+ + F+ NPYF++S L+KT+
Sbjct: 113 KSGYTITLNFNPNPYFEDSKLSKTF 137
>Medtr4g108570.1 | nucleosome/chromatin assembly factor group
protein | HC | chr4:44984273-44980061 | 20130731
Length = 254
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 24/145 (16%)
Query: 44 ETLSPEVRKRVEVLRDIQGEHDELEAKFLEERAQLEAKYQKLYEPLYKKRYXXXXXXXXX 103
E + E+ +E L++IQ + +++ + ++ ++E KY ++ +P+Y KR
Sbjct: 16 EEVDAELILSIEKLQEIQDDLEKINDEASDKVLEIEQKYNEIRKPVYDKR---------- 65
Query: 104 XXXXXXXXXXXXXXXXXXGVPNFWLNAMKTNETLAEEITERDEGALKYLQDIKW-CKVDE 162
+P+FWLNA ++ TL+E + + D+ KYL ++ D
Sbjct: 66 -------------NEIIKSIPDFWLNAFLSHPTLSELLNDEDQKIFKYLSSLEVEDNKDV 112
Query: 163 PKGFKLDFYFDSNPYFKNSVLTKTY 187
G+ + F+ NPYF++S L+KT+
Sbjct: 113 KSGYTITLNFNPNPYFEDSKLSKTF 137