Miyakogusa Predicted Gene

Lj3g3v0306950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0306950.1 Non Characterized Hit- tr|I3SZR7|I3SZR7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.37,0.00000000000008,no description,Coproporphyrinogen III
oxidase, aerobic; Coprogen_oxidas,Coproporphyrinogen III
oxida,NODE_64709_length_75_cov_83.360001.path2.1
         (38 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g098800.1 | coproporphyrinogen III oxidase | HC | chr5:432...    81   2e-16

>Medtr5g098800.1 | coproporphyrinogen III oxidase | HC |
           chr5:43267396-43273287 | 20130731
          Length = 399

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/38 (97%), Positives = 37/38 (97%)

Query: 1   MLLSFATECANSVIPAYIPIIEKRKDTPFTDHQKAWQQ 38
           MLLSFATECANSVIPAYIPIIEKRKD PFTDHQKAWQQ
Sbjct: 296 MLLSFATECANSVIPAYIPIIEKRKDLPFTDHQKAWQQ 333