Miyakogusa Predicted Gene
- Lj3g3v0306870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0306870.1 tr|A2Q465|A2Q465_MEDTR DEAD-box ATP-dependent RNA
helicase OS=Medicago truncatula GN=MTR_040s0046
PE,95.36,0,DEAD_ATP_HELICASE,RNA helicase, ATP-dependent, DEAD-box,
conserved site; DEAD-like helicases
superfa,NODE_25139_length_1789_cov_141.628845.path2.1
(431 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 818 0.0
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 631 0.0
Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like prote... 552 e-157
Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like prote... 552 e-157
Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like prote... 552 e-157
Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like prote... 552 e-157
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 426 e-119
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 426 e-119
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 424 e-119
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 424 e-119
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 360 1e-99
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 360 1e-99
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 360 1e-99
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 360 1e-99
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 360 1e-99
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 360 1e-99
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 360 1e-99
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 360 1e-99
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 360 1e-99
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 360 1e-99
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 358 6e-99
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 352 3e-97
Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 316 3e-86
Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 315 8e-86
Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like prote... 315 8e-86
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 307 2e-83
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 302 4e-82
Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 295 7e-80
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 290 2e-78
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 286 3e-77
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 283 3e-76
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 279 3e-75
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 276 2e-74
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 276 2e-74
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 276 2e-74
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 234 1e-61
Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like prote... 218 1e-56
Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like prote... 218 1e-56
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 218 1e-56
Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 214 1e-55
Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 211 9e-55
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 210 2e-54
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 210 2e-54
Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 201 1e-51
Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 197 2e-50
Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 196 3e-50
Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 196 4e-50
Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 196 5e-50
Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 196 5e-50
Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 193 2e-49
Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 191 1e-48
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 191 2e-48
Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 189 4e-48
Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 188 7e-48
Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 188 9e-48
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 187 3e-47
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 186 3e-47
Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 185 1e-46
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 184 2e-46
Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like prote... 177 2e-44
Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like prote... 176 4e-44
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 175 8e-44
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 175 8e-44
Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 174 2e-43
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 174 2e-43
Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family pro... 172 8e-43
Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family pro... 171 1e-42
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 171 1e-42
Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like prote... 170 2e-42
Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like prote... 168 1e-41
Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like prote... 167 2e-41
Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family pro... 166 3e-41
Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like prote... 165 9e-41
Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family pro... 164 2e-40
Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like prote... 156 3e-38
Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 154 1e-37
Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC | sc... 151 1e-36
Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family pro... 149 5e-36
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 147 1e-35
Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 139 5e-33
Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like prote... 135 1e-31
Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 135 1e-31
Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC | chr... 130 3e-30
Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC | chr... 130 3e-30
Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC | chr... 130 3e-30
Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC | chr... 130 3e-30
Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC | chr... 130 3e-30
Medtr4g077370.1 | DEAD-box helicase family protein | LC | chr4:2... 127 2e-29
Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like prote... 125 6e-29
Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 122 6e-28
Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 118 1e-26
Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 117 3e-26
Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 116 4e-26
Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 114 2e-25
Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like prote... 113 3e-25
Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like prote... 112 1e-24
Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like prote... 110 3e-24
Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like prote... 108 1e-23
Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like prote... 102 1e-21
Medtr8g032230.1 | DEAD-box helicase family protein | HC | chr8:1... 101 1e-21
Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like prote... 100 2e-21
Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like prote... 100 2e-21
Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 97 3e-20
Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 87 3e-17
Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC | ... 74 3e-13
Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC | ... 74 4e-13
Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 69 1e-11
Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC | ... 65 9e-11
Medtr2g031570.1 | DEAD-box helicase family protein | LC | chr2:1... 65 2e-10
Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC | chr3:28... 60 3e-09
Medtr1g050730.1 | DEAD-box helicase family protein | HC | chr1:1... 59 1e-08
Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC | ... 55 9e-08
Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein... 55 1e-07
Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC | s... 54 3e-07
Medtr6g040070.1 | DEAD/DEAH-box helicase | HC | chr6:14397151-14... 53 7e-07
Medtr8g018350.1 | eukaryotic translation initiation factor 4A1 |... 52 9e-07
Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like prote... 51 2e-06
Medtr8g018330.1 | eukaryotic translation initiation factor 4A1 |... 51 2e-06
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/431 (92%), Positives = 409/431 (94%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
MTEAEV EYRLRREITVEG+DVPKPVK+F+D FP+YVLEEVKKAGFVEPTPIQSQGWPM
Sbjct: 69 MTEAEVTEYRLRREITVEGKDVPKPVKSFSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPM 128
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQE
Sbjct: 129 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEA 188
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVL 180
TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEI+IATPGRLIDMLES+HTNLRRVTYLVL
Sbjct: 189 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLESNHTNLRRVTYLVL 248
Query: 181 DEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDL 240
DEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLY+PYKVIIGSEDL
Sbjct: 249 DEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSEDL 308
Query: 241 KANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPAL 300
KANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPAL
Sbjct: 309 KANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPAL 368
Query: 301 SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXX 360
SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH
Sbjct: 369 SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRI 428
Query: 361 XXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSGGFRDR 420
FFTAANARFAKELI+ILEEAGQRVS +LAAMGRGAPPPPSGGFRDR
Sbjct: 429 GRTGRAGAKGTAYTFFTAANARFAKELISILEEAGQRVSSELAAMGRGAPPPPSGGFRDR 488
Query: 421 GKGYGSGRPWS 431
GK +GSGRPWS
Sbjct: 489 GKSFGSGRPWS 499
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 631 bits (1628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/417 (71%), Positives = 356/417 (85%), Gaps = 6/417 (1%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
M++ +V +YR R+ITVEG DVPKP++ F++ FP+Y L+ + K GFVEPTPIQ+QGWPM
Sbjct: 175 MSDQQVMQYRASRDITVEGHDVPKPIRAFHEANFPDYCLDVIAKLGFVEPTPIQAQGWPM 234
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
AL GRDLIGIAETGSGKTL+YLLPAIVHV+AQP L G+GP+VLVLAPTRELAVQIQQE
Sbjct: 235 ALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQEA 294
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVL 180
KFG+ S I+ TCIYGG PKGPQ+RDL+ GVEIVIATPGRLIDMLE+ HTNL+RVTYLVL
Sbjct: 295 MKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLIDMLEAQHTNLQRVTYLVL 354
Query: 181 DEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDL 240
DEADRMLDMGF+PQIRKIV+QIRPDRQTLYWSATWPKEVE LAR+FL++PYKV+IGS L
Sbjct: 355 DEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYL 414
Query: 241 KANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPAL 300
KAN +I Q V++V + +KY++L+KLL+++MDGSRILIF +TKKGCDQ+TRQLRMDGWPAL
Sbjct: 415 KANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 474
Query: 301 SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXX 360
SIHGDK+QAERDWVL+EFKSG+SPIMTATDVAARGLDVKD+K V+NYDFP SLEDYVH
Sbjct: 475 SIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPSSLEDYVHRI 534
Query: 361 XXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSGGF 417
FFT+ANA++A++LI IL++AGQ VSP L+A+ R SGGF
Sbjct: 535 GRTGRAGAKGTAYSFFTSANAKYARDLIKILQDAGQIVSPALSALTR------SGGF 585
>Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 552 bits (1423), Expect = e-157, Method: Compositional matrix adjust.
Identities = 258/336 (76%), Positives = 303/336 (90%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
M++ +V +YR R+ITVEG DVPKP++ F++ FP+Y L+ + K GFVEPTPIQ+QGWPM
Sbjct: 175 MSDQQVMQYRASRDITVEGHDVPKPIRAFHEANFPDYCLDVIAKLGFVEPTPIQAQGWPM 234
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
AL GRDLIGIAETGSGKTL+YLLPAIVHV+AQP L G+GP+VLVLAPTRELAVQIQQE
Sbjct: 235 ALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQEA 294
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVL 180
KFG+ S I+ TCIYGG PKGPQ+RDL+ GVEIVIATPGRLIDMLE+ HTNL+RVTYLVL
Sbjct: 295 MKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLIDMLEAQHTNLQRVTYLVL 354
Query: 181 DEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDL 240
DEADRMLDMGF+PQIRKIV+QIRPDRQTLYWSATWPKEVE LAR+FL++PYKV+IGS L
Sbjct: 355 DEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYL 414
Query: 241 KANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPAL 300
KAN +I Q V++V + +KY++L+KLL+++MDGSRILIF +TKKGCDQ+TRQLRMDGWPAL
Sbjct: 415 KANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 474
Query: 301 SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGL 336
SIHGDK+QAERDWVL+EFKSG+SPIMTATDVAARGL
Sbjct: 475 SIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGL 510
>Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 552 bits (1423), Expect = e-157, Method: Compositional matrix adjust.
Identities = 258/336 (76%), Positives = 303/336 (90%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
M++ +V +YR R+ITVEG DVPKP++ F++ FP+Y L+ + K GFVEPTPIQ+QGWPM
Sbjct: 175 MSDQQVMQYRASRDITVEGHDVPKPIRAFHEANFPDYCLDVIAKLGFVEPTPIQAQGWPM 234
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
AL GRDLIGIAETGSGKTL+YLLPAIVHV+AQP L G+GP+VLVLAPTRELAVQIQQE
Sbjct: 235 ALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQEA 294
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVL 180
KFG+ S I+ TCIYGG PKGPQ+RDL+ GVEIVIATPGRLIDMLE+ HTNL+RVTYLVL
Sbjct: 295 MKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLIDMLEAQHTNLQRVTYLVL 354
Query: 181 DEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDL 240
DEADRMLDMGF+PQIRKIV+QIRPDRQTLYWSATWPKEVE LAR+FL++PYKV+IGS L
Sbjct: 355 DEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYL 414
Query: 241 KANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPAL 300
KAN +I Q V++V + +KY++L+KLL+++MDGSRILIF +TKKGCDQ+TRQLRMDGWPAL
Sbjct: 415 KANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 474
Query: 301 SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGL 336
SIHGDK+QAERDWVL+EFKSG+SPIMTATDVAARGL
Sbjct: 475 SIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGL 510
>Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 552 bits (1423), Expect = e-157, Method: Compositional matrix adjust.
Identities = 258/336 (76%), Positives = 303/336 (90%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
M++ +V +YR R+ITVEG DVPKP++ F++ FP+Y L+ + K GFVEPTPIQ+QGWPM
Sbjct: 175 MSDQQVMQYRASRDITVEGHDVPKPIRAFHEANFPDYCLDVIAKLGFVEPTPIQAQGWPM 234
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
AL GRDLIGIAETGSGKTL+YLLPAIVHV+AQP L G+GP+VLVLAPTRELAVQIQQE
Sbjct: 235 ALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQEA 294
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVL 180
KFG+ S I+ TCIYGG PKGPQ+RDL+ GVEIVIATPGRLIDMLE+ HTNL+RVTYLVL
Sbjct: 295 MKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLIDMLEAQHTNLQRVTYLVL 354
Query: 181 DEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDL 240
DEADRMLDMGF+PQIRKIV+QIRPDRQTLYWSATWPKEVE LAR+FL++PYKV+IGS L
Sbjct: 355 DEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYL 414
Query: 241 KANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPAL 300
KAN +I Q V++V + +KY++L+KLL+++MDGSRILIF +TKKGCDQ+TRQLRMDGWPAL
Sbjct: 415 KANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 474
Query: 301 SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGL 336
SIHGDK+QAERDWVL+EFKSG+SPIMTATDVAARGL
Sbjct: 475 SIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGL 510
>Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 552 bits (1423), Expect = e-157, Method: Compositional matrix adjust.
Identities = 258/336 (76%), Positives = 303/336 (90%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
M++ +V +YR R+ITVEG DVPKP++ F++ FP+Y L+ + K GFVEPTPIQ+QGWPM
Sbjct: 175 MSDQQVMQYRASRDITVEGHDVPKPIRAFHEANFPDYCLDVIAKLGFVEPTPIQAQGWPM 234
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
AL GRDLIGIAETGSGKTL+YLLPAIVHV+AQP L G+GP+VLVLAPTRELAVQIQQE
Sbjct: 235 ALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQEA 294
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVL 180
KFG+ S I+ TCIYGG PKGPQ+RDL+ GVEIVIATPGRLIDMLE+ HTNL+RVTYLVL
Sbjct: 295 MKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLIDMLEAQHTNLQRVTYLVL 354
Query: 181 DEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDL 240
DEADRMLDMGF+PQIRKIV+QIRPDRQTLYWSATWPKEVE LAR+FL++PYKV+IGS L
Sbjct: 355 DEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYL 414
Query: 241 KANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPAL 300
KAN +I Q V++V + +KY++L+KLL+++MDGSRILIF +TKKGCDQ+TRQLRMDGWPAL
Sbjct: 415 KANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPAL 474
Query: 301 SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGL 336
SIHGDK+QAERDWVL+EFKSG+SPIMTATDVAARGL
Sbjct: 475 SIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGL 510
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/419 (51%), Positives = 288/419 (68%), Gaps = 4/419 (0%)
Query: 7 DEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRD 66
D YR R EITV G +VP PV +F GFP +L EV+ AGF PTPIQ+Q WP+AL+ +D
Sbjct: 144 DAYRRRHEITVTGDNVPPPVTSFASSGFPSEILREVQNAGFSAPTPIQAQSWPIALQSKD 203
Query: 67 LIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGAS 126
++ IA+TGSGKTL YLLPA +H+ + + GP VLVL+PTRELA QIQ E KF +
Sbjct: 204 IVAIAKTGSGKTLGYLLPAFIHLK-RTNNNAKMGPTVLVLSPTRELATQIQDEAVKFSKT 262
Query: 127 SRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRM 186
SRI TC+YGG PKGPQ++D+ +G +IV+ATPGRL D+LE +L +V+YLVLDEADRM
Sbjct: 263 SRIACTCLYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEADRM 322
Query: 187 LDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSED-LKANHA 245
LDMGF+PQIRKIV+ + RQTL ++ATWPKEV ++A L +P +V IG+ D L AN +
Sbjct: 323 LDMGFEPQIRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKS 382
Query: 246 IKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 305
I Q+++++ +K +L +L GS+I+IF TKK CDQ+ R L + A +IHGD
Sbjct: 383 ITQHIEVLTYVEKQRRLETILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAAIHGD 441
Query: 306 KSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXX 365
KSQA+RD VL++F+SG++P++ ATDVAARGLDVKD++ V+N+DFP +EDYVH
Sbjct: 442 KSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGR 501
Query: 366 XXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAM-GRGAPPPPSGGFRDRGKG 423
FF +A+ A +LI ILE A QRV P+L + RG +R G+G
Sbjct: 502 AGATGIAYTFFGDQDAKHASDLIKILEGANQRVPPELRELSSRGGGGFSRSKYRTGGRG 560
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/419 (51%), Positives = 288/419 (68%), Gaps = 4/419 (0%)
Query: 7 DEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRD 66
D YR R EITV G +VP PV +F GFP +L EV+ AGF PTPIQ+Q WP+AL+ +D
Sbjct: 144 DAYRRRHEITVTGDNVPPPVTSFASSGFPSEILREVQNAGFSAPTPIQAQSWPIALQSKD 203
Query: 67 LIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGAS 126
++ IA+TGSGKTL YLLPA +H+ + + GP VLVL+PTRELA QIQ E KF +
Sbjct: 204 IVAIAKTGSGKTLGYLLPAFIHLK-RTNNNAKMGPTVLVLSPTRELATQIQDEAVKFSKT 262
Query: 127 SRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRM 186
SRI TC+YGG PKGPQ++D+ +G +IV+ATPGRL D+LE +L +V+YLVLDEADRM
Sbjct: 263 SRIACTCLYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEADRM 322
Query: 187 LDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSED-LKANHA 245
LDMGF+PQIRKIV+ + RQTL ++ATWPKEV ++A L +P +V IG+ D L AN +
Sbjct: 323 LDMGFEPQIRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKS 382
Query: 246 IKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 305
I Q+++++ +K +L +L GS+I+IF TKK CDQ+ R L + A +IHGD
Sbjct: 383 ITQHIEVLTYVEKQRRLETILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAAIHGD 441
Query: 306 KSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXX 365
KSQA+RD VL++F+SG++P++ ATDVAARGLDVKD++ V+N+DFP +EDYVH
Sbjct: 442 KSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGR 501
Query: 366 XXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAM-GRGAPPPPSGGFRDRGKG 423
FF +A+ A +LI ILE A QRV P+L + RG +R G+G
Sbjct: 502 AGATGIAYTFFGDQDAKHASDLIKILEGANQRVPPELRELSSRGGGGFSRSKYRTGGRG 560
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/424 (52%), Positives = 295/424 (69%), Gaps = 12/424 (2%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
++ AE+ Y + E+T G ++P P TF+ GFP +L+EV AGF PTPIQ+Q WP+
Sbjct: 471 LSAAEL--YCQQHEVTASGDNIPPPFMTFDSTGFPPEILQEVCSAGFSNPTPIQAQTWPI 528
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
AL+GRD++ IA+TGSGKTL YL+PA + + Q + +GP VLVLAPTRELA QIQ+E
Sbjct: 529 ALQGRDIVAIAKTGSGKTLGYLMPAFILLR-QRRNNSLNGPTVLVLAPTRELATQIQEEV 587
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVL 180
KF SSR+ TC+YGG PK Q+++L +G +IV+ATPGRL D+LE + +V+ LVL
Sbjct: 588 FKFARSSRVSCTCLYGGAPKALQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVL 647
Query: 181 DEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSED- 239
DEADRMLDMGF+PQIRKIV++I P RQTL ++ATWPKEV ++A L +P +V IG+ D
Sbjct: 648 DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAGDLLVNPVQVNIGNVDE 707
Query: 240 LKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQL-RMDGWP 298
L AN +I QYV++VP+ +K +L ++L GS+I+IF TKK CDQ+ R + R G
Sbjct: 708 LAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKKLCDQLARSIGRTFG-- 765
Query: 299 ALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
A +IHGDKSQ ERDWVL +F++GKSPI+ ATDVAARGLD+KD++ VINYDFP +EDYVH
Sbjct: 766 AAAIHGDKSQGERDWVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVH 825
Query: 359 XXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMG-RGAPPPPSGGF 417
FF+ + + A +LI +LE A Q V P+L + RG PPS G
Sbjct: 826 RIGRTGRAGATGVAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRG---PPSFG- 881
Query: 418 RDRG 421
+DRG
Sbjct: 882 KDRG 885
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/424 (52%), Positives = 295/424 (69%), Gaps = 12/424 (2%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
++ AE+ Y + E+T G ++P P TF+ GFP +L+EV AGF PTPIQ+Q WP+
Sbjct: 471 LSAAEL--YCQQHEVTASGDNIPPPFMTFDSTGFPPEILQEVCSAGFSNPTPIQAQTWPI 528
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
AL+GRD++ IA+TGSGKTL YL+PA + + Q + +GP VLVLAPTRELA QIQ+E
Sbjct: 529 ALQGRDIVAIAKTGSGKTLGYLMPAFILLR-QRRNNSLNGPTVLVLAPTRELATQIQEEV 587
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVL 180
KF SSR+ TC+YGG PK Q+++L +G +IV+ATPGRL D+LE + +V+ LVL
Sbjct: 588 FKFARSSRVSCTCLYGGAPKALQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVL 647
Query: 181 DEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSED- 239
DEADRMLDMGF+PQIRKIV++I P RQTL ++ATWPKEV ++A L +P +V IG+ D
Sbjct: 648 DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAGDLLVNPVQVNIGNVDE 707
Query: 240 LKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQL-RMDGWP 298
L AN +I QYV++VP+ +K +L ++L GS+I+IF TKK CDQ+ R + R G
Sbjct: 708 LAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKKLCDQLARSIGRTFG-- 765
Query: 299 ALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
A +IHGDKSQ ERDWVL +F++GKSPI+ ATDVAARGLD+KD++ VINYDFP +EDYVH
Sbjct: 766 AAAIHGDKSQGERDWVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVH 825
Query: 359 XXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMG-RGAPPPPSGGF 417
FF+ + + A +LI +LE A Q V P+L + RG PPS G
Sbjct: 826 RIGRTGRAGATGVAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRG---PPSFG- 881
Query: 418 RDRG 421
+DRG
Sbjct: 882 KDRG 885
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/429 (44%), Positives = 274/429 (63%), Gaps = 5/429 (1%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
MT EV YR + E+ + G+DVPKPVK++N G +L+ +KKA F +P PIQ+Q P+
Sbjct: 477 MTVEEVAFYRKQLELKIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPV 536
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
+ GRD IG+A+TGSGKTLA++LP + H+ QP + GDGPI L++APTREL QI +
Sbjct: 537 IMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDI 596
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHH---TNLRRVTY 177
KF I+ +YGG Q+ +L++G EIV+ TPGR+ID+L + TNLRRVTY
Sbjct: 597 RKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTY 656
Query: 178 LVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGS 237
LV+DEADRM DMGF+PQI +IV IRPDRQT+ +SAT+P++VE LARK L P ++ +G
Sbjct: 657 LVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGG 716
Query: 238 EDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGW 297
+ N I Q V++ PE +++ +L++LL + + +IL+F+ ++ CD + + L G+
Sbjct: 717 RSV-VNKDIAQLVEVRPENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGY 775
Query: 298 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
P LS+HG K Q +R+ +S+FKS ++ AT +AARGLDVK+++ VIN+D P EDYV
Sbjct: 776 PCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYV 835
Query: 358 HXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSGGF 417
H F + +AR+A +L+ LE + Q V DL ++ G + G
Sbjct: 836 HRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQIVPDDLKSLAEGFMAKVTQGL 895
Query: 418 RD-RGKGYG 425
G GYG
Sbjct: 896 EQAHGTGYG 904
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/429 (44%), Positives = 274/429 (63%), Gaps = 5/429 (1%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
MT EV YR + E+ + G+DVPKPVK++N G +L+ +KKA F +P PIQ+Q P+
Sbjct: 477 MTVEEVAFYRKQLELKIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPV 536
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
+ GRD IG+A+TGSGKTLA++LP + H+ QP + GDGPI L++APTREL QI +
Sbjct: 537 IMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDI 596
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHH---TNLRRVTY 177
KF I+ +YGG Q+ +L++G EIV+ TPGR+ID+L + TNLRRVTY
Sbjct: 597 RKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTY 656
Query: 178 LVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGS 237
LV+DEADRM DMGF+PQI +IV IRPDRQT+ +SAT+P++VE LARK L P ++ +G
Sbjct: 657 LVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGG 716
Query: 238 EDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGW 297
+ N I Q V++ PE +++ +L++LL + + +IL+F+ ++ CD + + L G+
Sbjct: 717 RSV-VNKDIAQLVEVRPENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGY 775
Query: 298 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
P LS+HG K Q +R+ +S+FKS ++ AT +AARGLDVK+++ VIN+D P EDYV
Sbjct: 776 PCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYV 835
Query: 358 HXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSGGF 417
H F + +AR+A +L+ LE + Q V DL ++ G + G
Sbjct: 836 HRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQIVPDDLKSLAEGFMAKVTQGL 895
Query: 418 RD-RGKGYG 425
G GYG
Sbjct: 896 EQAHGTGYG 904
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/429 (44%), Positives = 274/429 (63%), Gaps = 5/429 (1%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
MT EV YR + E+ + G+DVPKPVK++N G +L+ +KKA F +P PIQ+Q P+
Sbjct: 477 MTVEEVAFYRKQLELKIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPV 536
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
+ GRD IG+A+TGSGKTLA++LP + H+ QP + GDGPI L++APTREL QI +
Sbjct: 537 IMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDI 596
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHH---TNLRRVTY 177
KF I+ +YGG Q+ +L++G EIV+ TPGR+ID+L + TNLRRVTY
Sbjct: 597 RKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTY 656
Query: 178 LVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGS 237
LV+DEADRM DMGF+PQI +IV IRPDRQT+ +SAT+P++VE LARK L P ++ +G
Sbjct: 657 LVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGG 716
Query: 238 EDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGW 297
+ N I Q V++ PE +++ +L++LL + + +IL+F+ ++ CD + + L G+
Sbjct: 717 RSV-VNKDIAQLVEVRPENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGY 775
Query: 298 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
P LS+HG K Q +R+ +S+FKS ++ AT +AARGLDVK+++ VIN+D P EDYV
Sbjct: 776 PCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYV 835
Query: 358 HXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSGGF 417
H F + +AR+A +L+ LE + Q V DL ++ G + G
Sbjct: 836 HRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQIVPDDLKSLAEGFMAKVTQGL 895
Query: 418 RD-RGKGYG 425
G GYG
Sbjct: 896 EQAHGTGYG 904
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/429 (44%), Positives = 274/429 (63%), Gaps = 5/429 (1%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
MT EV YR + E+ + G+DVPKPVK++N G +L+ +KKA F +P PIQ+Q P+
Sbjct: 477 MTVEEVAFYRKQLELKIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPV 536
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
+ GRD IG+A+TGSGKTLA++LP + H+ QP + GDGPI L++APTREL QI +
Sbjct: 537 IMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDI 596
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHH---TNLRRVTY 177
KF I+ +YGG Q+ +L++G EIV+ TPGR+ID+L + TNLRRVTY
Sbjct: 597 RKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTY 656
Query: 178 LVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGS 237
LV+DEADRM DMGF+PQI +IV IRPDRQT+ +SAT+P++VE LARK L P ++ +G
Sbjct: 657 LVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGG 716
Query: 238 EDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGW 297
+ N I Q V++ PE +++ +L++LL + + +IL+F+ ++ CD + + L G+
Sbjct: 717 RSV-VNKDIAQLVEVRPENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGY 775
Query: 298 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
P LS+HG K Q +R+ +S+FKS ++ AT +AARGLDVK+++ VIN+D P EDYV
Sbjct: 776 PCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYV 835
Query: 358 HXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSGGF 417
H F + +AR+A +L+ LE + Q V DL ++ G + G
Sbjct: 836 HRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQIVPDDLKSLAEGFMAKVTQGL 895
Query: 418 RD-RGKGYG 425
G GYG
Sbjct: 896 EQAHGTGYG 904
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/429 (44%), Positives = 274/429 (63%), Gaps = 5/429 (1%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
MT EV YR + E+ + G+DVPKPVK++N G +L+ +KKA F +P PIQ+Q P+
Sbjct: 477 MTVEEVAFYRKQLELKIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPV 536
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
+ GRD IG+A+TGSGKTLA++LP + H+ QP + GDGPI L++APTREL QI +
Sbjct: 537 IMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDI 596
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHH---TNLRRVTY 177
KF I+ +YGG Q+ +L++G EIV+ TPGR+ID+L + TNLRRVTY
Sbjct: 597 RKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTY 656
Query: 178 LVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGS 237
LV+DEADRM DMGF+PQI +IV IRPDRQT+ +SAT+P++VE LARK L P ++ +G
Sbjct: 657 LVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGG 716
Query: 238 EDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGW 297
+ N I Q V++ PE +++ +L++LL + + +IL+F+ ++ CD + + L G+
Sbjct: 717 RSV-VNKDIAQLVEVRPENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGY 775
Query: 298 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
P LS+HG K Q +R+ +S+FKS ++ AT +AARGLDVK+++ VIN+D P EDYV
Sbjct: 776 PCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYV 835
Query: 358 HXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSGGF 417
H F + +AR+A +L+ LE + Q V DL ++ G + G
Sbjct: 836 HRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQIVPDDLKSLAEGFMAKVTQGL 895
Query: 418 RD-RGKGYG 425
G GYG
Sbjct: 896 EQAHGTGYG 904
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/429 (44%), Positives = 274/429 (63%), Gaps = 5/429 (1%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
MT EV YR + E+ + G+DVPKPVK++N G +L+ +KKA F +P PIQ+Q P+
Sbjct: 477 MTVEEVAFYRKQLELKIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPV 536
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
+ GRD IG+A+TGSGKTLA++LP + H+ QP + GDGPI L++APTREL QI +
Sbjct: 537 IMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDI 596
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHH---TNLRRVTY 177
KF I+ +YGG Q+ +L++G EIV+ TPGR+ID+L + TNLRRVTY
Sbjct: 597 RKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTY 656
Query: 178 LVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGS 237
LV+DEADRM DMGF+PQI +IV IRPDRQT+ +SAT+P++VE LARK L P ++ +G
Sbjct: 657 LVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGG 716
Query: 238 EDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGW 297
+ N I Q V++ PE +++ +L++LL + + +IL+F+ ++ CD + + L G+
Sbjct: 717 RSV-VNKDIAQLVEVRPENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGY 775
Query: 298 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
P LS+HG K Q +R+ +S+FKS ++ AT +AARGLDVK+++ VIN+D P EDYV
Sbjct: 776 PCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYV 835
Query: 358 HXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSGGF 417
H F + +AR+A +L+ LE + Q V DL ++ G + G
Sbjct: 836 HRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQIVPDDLKSLAEGFMAKVTQGL 895
Query: 418 RD-RGKGYG 425
G GYG
Sbjct: 896 EQAHGTGYG 904
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/429 (44%), Positives = 274/429 (63%), Gaps = 5/429 (1%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
MT EV YR + E+ + G+DVPKPVK++N G +L+ +KKA F +P PIQ+Q P+
Sbjct: 477 MTVEEVAFYRKQLELKIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPV 536
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
+ GRD IG+A+TGSGKTLA++LP + H+ QP + GDGPI L++APTREL QI +
Sbjct: 537 IMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDI 596
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHH---TNLRRVTY 177
KF I+ +YGG Q+ +L++G EIV+ TPGR+ID+L + TNLRRVTY
Sbjct: 597 RKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTY 656
Query: 178 LVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGS 237
LV+DEADRM DMGF+PQI +IV IRPDRQT+ +SAT+P++VE LARK L P ++ +G
Sbjct: 657 LVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGG 716
Query: 238 EDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGW 297
+ N I Q V++ PE +++ +L++LL + + +IL+F+ ++ CD + + L G+
Sbjct: 717 RSV-VNKDIAQLVEVRPENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGY 775
Query: 298 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
P LS+HG K Q +R+ +S+FKS ++ AT +AARGLDVK+++ VIN+D P EDYV
Sbjct: 776 PCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYV 835
Query: 358 HXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSGGF 417
H F + +AR+A +L+ LE + Q V DL ++ G + G
Sbjct: 836 HRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQIVPDDLKSLAEGFMAKVTQGL 895
Query: 418 RD-RGKGYG 425
G GYG
Sbjct: 896 EQAHGTGYG 904
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/429 (44%), Positives = 274/429 (63%), Gaps = 5/429 (1%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
MT EV YR + E+ + G+DVPKPVK++N G +L+ +KKA F +P PIQ+Q P+
Sbjct: 477 MTVEEVAFYRKQLELKIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPV 536
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
+ GRD IG+A+TGSGKTLA++LP + H+ QP + GDGPI L++APTREL QI +
Sbjct: 537 IMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDI 596
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHH---TNLRRVTY 177
KF I+ +YGG Q+ +L++G EIV+ TPGR+ID+L + TNLRRVTY
Sbjct: 597 RKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTY 656
Query: 178 LVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGS 237
LV+DEADRM DMGF+PQI +IV IRPDRQT+ +SAT+P++VE LARK L P ++ +G
Sbjct: 657 LVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGG 716
Query: 238 EDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGW 297
+ N I Q V++ PE +++ +L++LL + + +IL+F+ ++ CD + + L G+
Sbjct: 717 RSV-VNKDIAQLVEVRPENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGY 775
Query: 298 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
P LS+HG K Q +R+ +S+FKS ++ AT +AARGLDVK+++ VIN+D P EDYV
Sbjct: 776 PCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYV 835
Query: 358 HXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSGGF 417
H F + +AR+A +L+ LE + Q V DL ++ G + G
Sbjct: 836 HRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQIVPDDLKSLAEGFMAKVTQGL 895
Query: 418 RD-RGKGYG 425
G GYG
Sbjct: 896 EQAHGTGYG 904
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/429 (44%), Positives = 274/429 (63%), Gaps = 5/429 (1%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
MT EV YR + E+ + G+DVPKPVK++N G +L+ +KKA F +P PIQ+Q P+
Sbjct: 477 MTVEEVAFYRKQLELKIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPV 536
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
+ GRD IG+A+TGSGKTLA++LP + H+ QP + GDGPI L++APTREL QI +
Sbjct: 537 IMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDI 596
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHH---TNLRRVTY 177
KF I+ +YGG Q+ +L++G EIV+ TPGR+ID+L + TNLRRVTY
Sbjct: 597 RKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTY 656
Query: 178 LVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGS 237
LV+DEADRM DMGF+PQI +IV IRPDRQT+ +SAT+P++VE LARK L P ++ +G
Sbjct: 657 LVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGG 716
Query: 238 EDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGW 297
+ N I Q V++ PE +++ +L++LL + + +IL+F+ ++ CD + + L G+
Sbjct: 717 RSV-VNKDIAQLVEVRPENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGY 775
Query: 298 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
P LS+HG K Q +R+ +S+FKS ++ AT +AARGLDVK+++ VIN+D P EDYV
Sbjct: 776 PCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYV 835
Query: 358 HXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSGGF 417
H F + +AR+A +L+ LE + Q V DL ++ G + G
Sbjct: 836 HRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQIVPDDLKSLAEGFMAKVTQGL 895
Query: 418 RD-RGKGYG 425
G GYG
Sbjct: 896 EQAHGTGYG 904
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/429 (44%), Positives = 274/429 (63%), Gaps = 5/429 (1%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
MT EV YR + E+ + G+DVPKPVK++N G +L+ +KKA F +P PIQ+Q P+
Sbjct: 477 MTVEEVAFYRKQLELKIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPV 536
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
+ GRD IG+A+TGSGKTLA++LP + H+ QP + GDGPI L++APTREL QI +
Sbjct: 537 IMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDI 596
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHH---TNLRRVTY 177
KF I+ +YGG Q+ +L++G EIV+ TPGR+ID+L + TNLRRVTY
Sbjct: 597 RKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTY 656
Query: 178 LVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGS 237
LV+DEADRM DMGF+PQI +IV IRPDRQT+ +SAT+P++VE LARK L P ++ +G
Sbjct: 657 LVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGG 716
Query: 238 EDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGW 297
+ N I Q V++ PE +++ +L++LL + + +IL+F+ ++ CD + + L G+
Sbjct: 717 RSV-VNKDIAQLVEVRPENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGY 775
Query: 298 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
P LS+HG K Q +R+ +S+FKS ++ AT +AARGLDVK+++ VIN+D P EDYV
Sbjct: 776 PCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYV 835
Query: 358 HXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSGGF 417
H F + +AR+A +L+ LE + Q V DL ++ G + G
Sbjct: 836 HRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQIVPDDLKSLAEGFMAKVTQGL 895
Query: 418 RD-RGKGYG 425
G GYG
Sbjct: 896 EQAHGTGYG 904
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 358 bits (919), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 190/404 (47%), Positives = 258/404 (63%), Gaps = 3/404 (0%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
M+E +V +YR I V G +VPKPVKTF D GF ++ +KK G+ +PT IQ Q P+
Sbjct: 205 MSEQDVIDYRKSLAIRVSGFEVPKPVKTFEDCGFAPQIMGAIKKQGYEKPTSIQCQALPV 264
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
L GRD+IGIA+TGSGKT A++LP IVH+ QP L +GPI ++ APTRELA QI E
Sbjct: 265 VLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEA 324
Query: 121 TKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVL 180
KF + I+ + +YGG+ K Q ++L+ G EIV+ATPGRLIDML+ + R TYLVL
Sbjct: 325 KKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALAMLRATYLVL 384
Query: 181 DEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDL 240
DEADRM D+GF+PQ+R IV QIRPDRQTL +SAT P++VE+LAR+ L DP +V +G +
Sbjct: 385 DEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPIRVTVGEVGM 444
Query: 241 KANHAIKQYVDIVP-EKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPA 299
AN I Q V ++P + +K L++ L +++D L+F K D+I QL G+
Sbjct: 445 -ANEDITQVVQVIPSDSEKLPWLLEKLHEMIDQGDTLVFASKKATVDEIEVQLGQRGFKV 503
Query: 300 LSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHX 359
++HGDK Q+ R +L +FKSG ++ ATDVAARGLD+K +K V+N+D ++ +VH
Sbjct: 504 AALHGDKDQSSRMDILQKFKSGAYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHR 563
Query: 360 X-XXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDL 402
T ARFA EL+ L AGQ VS +L
Sbjct: 564 IGRTGRAGDKDGVAYTLITQKEARFAGELVNSLVAAGQNVSTEL 607
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 352 bits (904), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 187/388 (48%), Positives = 246/388 (63%), Gaps = 8/388 (2%)
Query: 25 PVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLP 84
PVK F D G PE VLE K GF +P+PIQS+ WP L GRDLIGIA TGSGKTLA+ +P
Sbjct: 101 PVKRFEDSGLPENVLECCK--GFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIP 158
Query: 85 AIVHV---NAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKG 141
AI+HV G P+ L+L+PTRELA QI G S ++S C+YGG PKG
Sbjct: 159 AIMHVMNKRKSKGSSKGRNPLCLMLSPTRELAQQISDVLCDAGKSCGVESVCLYGGTPKG 218
Query: 142 PQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ 201
Q+ L+ G++IVI TPGR+ D++E L+ V+++VLDEADRMLDMGF+ +R I+ Q
Sbjct: 219 AQISALKSGIDIVIGTPGRIQDLVEMGICRLQEVSFVVLDEADRMLDMGFEQIVRSILGQ 278
Query: 202 IRPDRQTLYWSATWPKEVEQLARKFLY-DPYKVIIGSEDLKANHAIKQYVDIVPEKQKYD 260
RQ + +SATWP V LA++F+ +P KV++GSEDL ANH + Q V+++ E+ +
Sbjct: 279 TCSARQMVMFSATWPLAVHHLAQEFMDPNPVKVVVGSEDLSANHDVMQIVEVLDERLRDK 338
Query: 261 KLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF 318
+L+ LLE +R+L+F+ K ++ + L+ GW A+SI GDKSQ ER LS F
Sbjct: 339 RLLALLEKYHKSQKNRVLVFVLYKWETTRVEKMLQQGGWKAVSISGDKSQHERTKALSLF 398
Query: 319 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTA 378
K+G P+M ATDVAARGLD+ DV+ VIN+ FP +LEDYVH FFT
Sbjct: 399 KNGSCPLMIATDVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTGRAGKKGVAHTFFTH 458
Query: 379 ANARFAKELITILEEAGQRVSPDLAAMG 406
N A EL+ +L EAGQ V DL G
Sbjct: 459 LNKGLAGELVNVLREAGQVVPDDLLKFG 486
>Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:23756195-23750953 | 20130731
Length = 608
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 176/428 (41%), Positives = 255/428 (59%), Gaps = 27/428 (6%)
Query: 15 ITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETG 74
+ G +VP PV TF ++ + + + +K+ +V+PTP+Q P++L GRDL+ A+TG
Sbjct: 141 VETSGENVPPPVNTFAEIDLGDALNQNIKRCKYVKPTPVQRYAIPISLAGRDLMACAQTG 200
Query: 75 SGKTLAYLLPAIVHV-----NAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRI 129
SGKT A+ P I + +P + P+ L+L+PTREL+ QI E KF + +
Sbjct: 201 SGKTAAFCFPIISGILTEQYAQRPRVARTAYPLALILSPTRELSCQIHDEAKKFSYQTGV 260
Query: 130 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDM 189
K YGG P Q+R+L++GV+I++ATPGRL+D+LE +L+ + YL LDEADRMLDM
Sbjct: 261 KVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 320
Query: 190 GFDPQIRKIVSQIRPD----RQTLYWSATWPKEVEQLARKFLYDPYKVIIG----SEDLK 241
GF+PQIRKIV Q+ RQTL +SAT+PKE+++LA FL + +G S DL
Sbjct: 321 GFEPQIRKIVEQMDMPPPGMRQTLLFSATFPKEIQRLASDFLASYIFLAVGRVGSSTDL- 379
Query: 242 ANHAIKQYVDIVPEKQKYDKLVKLL----EDIMDGSR--ILIFMDTKKGCDQITRQLRMD 295
I Q V+ V E K L+ LL E+ ++G + L+F++TKKG D + L ++
Sbjct: 380 ----IAQRVEYVLESDKRSHLMDLLHAQRENDVNGKQGLTLVFVETKKGADALEHCLCVN 435
Query: 296 GWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLED 355
G+PA IHGD++Q ER+ L FK+G +PI+ ATDVAARGLD+ V +V+N+D P ++D
Sbjct: 436 GFPATCIHGDRTQQEREQALRSFKTGNTPILVATDVAARGLDIPRVAHVVNFDLPNDIDD 495
Query: 356 YVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSG 415
YVH FF +N AK L +++EA Q V A + R A P G
Sbjct: 496 YVHRIGRTGRAGKMGLATAFFNDSNLSMAKPLADLMQEANQEVP---AWLTRYAARTPYG 552
Query: 416 GFRDRGKG 423
G R++ G
Sbjct: 553 GGRNKRTG 560
>Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768711-37774877 | 20130731
Length = 613
Score = 315 bits (806), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 169/404 (41%), Positives = 244/404 (60%), Gaps = 25/404 (6%)
Query: 15 ITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETG 74
+ G +VP PV TF ++ E + + +++ +V+PTP+Q P++L GRDL+ A+TG
Sbjct: 132 VETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTG 191
Query: 75 SGKTLAYLLPAIVHV-NAQPILDPGDG-----PIVLVLAPTRELAVQIQQECTKFGASSR 128
SGKT A+ P I + QP P G P+ LVL+PTREL++QI +E KF +
Sbjct: 192 SGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALVLSPTRELSMQIHEEARKFSYQTG 251
Query: 129 IKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLD 188
++ YGG P Q+R+L++GV+I++ATPGRL+D+LE +L + YL LDEADRMLD
Sbjct: 252 VRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLSMIRYLALDEADRMLD 311
Query: 189 MGFDPQIRKIVSQIRPD----RQTLYWSATWPKEVEQLARKFLYDPYKVIIG----SEDL 240
MGF+PQIRKIV Q+ RQT+ +SAT+PKE+++LA FL + + +G S DL
Sbjct: 312 MGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFLSNYIFLAVGRVGSSTDL 371
Query: 241 KANHAIKQYVDIVPEKQKYDKLVKLLE----DIMDGSR--ILIFMDTKKGCDQITRQLRM 294
I Q V+ V E K L+ LL + + G + L+F++TKKG D + L +
Sbjct: 372 -----IDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCL 426
Query: 295 DGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLE 354
+ +PA +IHGD+SQ ER+ L FKSG +PI+ ATDVAARGLD+ V +V+N+D P ++
Sbjct: 427 NNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDID 486
Query: 355 DYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRV 398
DYVH FF N A+ L +++EA Q V
Sbjct: 487 DYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEV 530
>Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768655-37774862 | 20130731
Length = 613
Score = 315 bits (806), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 169/404 (41%), Positives = 244/404 (60%), Gaps = 25/404 (6%)
Query: 15 ITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETG 74
+ G +VP PV TF ++ E + + +++ +V+PTP+Q P++L GRDL+ A+TG
Sbjct: 132 VETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTG 191
Query: 75 SGKTLAYLLPAIVHV-NAQPILDPGDG-----PIVLVLAPTRELAVQIQQECTKFGASSR 128
SGKT A+ P I + QP P G P+ LVL+PTREL++QI +E KF +
Sbjct: 192 SGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALVLSPTRELSMQIHEEARKFSYQTG 251
Query: 129 IKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLD 188
++ YGG P Q+R+L++GV+I++ATPGRL+D+LE +L + YL LDEADRMLD
Sbjct: 252 VRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLSMIRYLALDEADRMLD 311
Query: 189 MGFDPQIRKIVSQIRPD----RQTLYWSATWPKEVEQLARKFLYDPYKVIIG----SEDL 240
MGF+PQIRKIV Q+ RQT+ +SAT+PKE+++LA FL + + +G S DL
Sbjct: 312 MGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFLSNYIFLAVGRVGSSTDL 371
Query: 241 KANHAIKQYVDIVPEKQKYDKLVKLLE----DIMDGSR--ILIFMDTKKGCDQITRQLRM 294
I Q V+ V E K L+ LL + + G + L+F++TKKG D + L +
Sbjct: 372 -----IDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCL 426
Query: 295 DGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLE 354
+ +PA +IHGD+SQ ER+ L FKSG +PI+ ATDVAARGLD+ V +V+N+D P ++
Sbjct: 427 NNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDID 486
Query: 355 DYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRV 398
DYVH FF N A+ L +++EA Q V
Sbjct: 487 DYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEV 530
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/361 (43%), Positives = 229/361 (63%), Gaps = 12/361 (3%)
Query: 9 YRLRREITVEGRDV--PKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRD 66
+RL ++TV + P P+++FND+ +++++ + PT IQ+Q P+AL GRD
Sbjct: 96 HRLNLDVTVSSDSLAAPAPIESFNDMCLHPSIMKDIAYHDYTRPTSIQAQAMPIALSGRD 155
Query: 67 LIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGAS 126
L+G AETGSGKT A+ +P I H AQP + GDGP+ LVLAPTRELA QI++E F S
Sbjct: 156 LLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRS 215
Query: 127 -SRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADR 185
K+ + GG Q +L+ GVEI +ATPGR ID L+ +T+L R++Y+VLDEADR
Sbjct: 216 LESFKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADR 275
Query: 186 MLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHA 245
MLDMGF+PQIR+I+ + QTL +SAT P E+E L++++L P +V +G +
Sbjct: 276 MLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALSKEYLASPVQVKVGKVSSPTTN- 334
Query: 246 IKQYVDIVPEKQKYDKLVKLL-EDIMDGSRI-------LIFMDTKKGCDQITRQLRMDGW 297
+ Q + V E +K D+L+ LL E+ + ++F++ K CD++ L G
Sbjct: 335 VSQTLVKVSENEKIDRLLDLLVEEASQAEKCGHPFPLTIVFVERKTRCDEVAEALIAQGL 394
Query: 298 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
A+S+HG +SQ+ER+ L +F+S + I+ ATDVA+RGLDV V +VIN D P + EDY+
Sbjct: 395 SAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYI 454
Query: 358 H 358
H
Sbjct: 455 H 455
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 302 bits (773), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 168/413 (40%), Positives = 244/413 (59%), Gaps = 21/413 (5%)
Query: 6 VDEYRLRREITVE--GRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALK 63
V + I VE G +VP PV F + E + +++ +V+PTP+Q P+A+
Sbjct: 116 VANFEAYESIPVEATGENVPPPVNLFAETELHEDLKNNIERCKYVKPTPVQRYAIPIAVA 175
Query: 64 GRDLIGIAETGSGKTLAYLLPAIVHVN----AQPILDPGDG-------PIVLVLAPTREL 112
GRDL+ A+TGSGKT A+ P I + A +L G G P L+L+PTREL
Sbjct: 176 GRDLMACAQTGSGKTAAFCFPIISGIMKERLASGLLPRGGGVDSDVAFPTALILSPTREL 235
Query: 113 AVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNL 172
+ QI E KF + +K +YGG P G Q+R L++GV+I++ATPGRL+D++E +L
Sbjct: 236 SCQIHAEACKFAHQTGVKIAVVYGGAPIGQQLRILERGVDILVATPGRLVDLIERERVSL 295
Query: 173 RRVTYLVLDEADRMLDMGFDPQIRKIVSQIR----PDRQTLYWSATWPKEVEQLARKFLY 228
+++ YL LDEADRMLDMGF+ QIR IV Q+ DRQTL +SAT+P +++LA FL
Sbjct: 296 KKIKYLALDEADRMLDMGFEHQIRNIVQQMHMPPPGDRQTLLFSATFPDNIQKLASDFLS 355
Query: 229 DPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLL-EDIMDG--SRILIFMDTKKGC 285
+ + +G + I Q ++ V + +K +LV LL ++++G + L+F++TKKG
Sbjct: 356 NYVFLAVGRVG-SSTELIVQKIESVQDMEKRTRLVDLLRRNVVNGKLALTLVFVETKKGA 414
Query: 286 DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVI 345
D + L +PA++IHGDK Q ER+ L FK G +PIM ATDVA+RGLD+ V +VI
Sbjct: 415 DALENWLCRINFPAIAIHGDKVQMERERALRSFKRGLTPIMVATDVASRGLDIPHVAHVI 474
Query: 346 NYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRV 398
N+D P ++DYVH FF+ N AK L+ +L+EA Q V
Sbjct: 475 NFDLPRDIDDYVHRIGRTGRAGQSGLATAFFSTKNMPMAKSLVGLLQEAKQEV 527
>Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857813-27867050 | 20130731
Length = 456
Score = 295 bits (754), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 223/353 (63%), Gaps = 12/353 (3%)
Query: 9 YRLRREITVEGRDV--PKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRD 66
+RL ++TV + P P+++FND+ +++++ + PT IQ+Q P+AL GRD
Sbjct: 96 HRLNLDVTVSSDSLAAPAPIESFNDMCLHPSIMKDIAYHDYTRPTSIQAQAMPIALSGRD 155
Query: 67 LIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGAS 126
L+G AETGSGKT A+ +P I H AQP + GDGP+ LVLAPTRELA QI++E F S
Sbjct: 156 LLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRS 215
Query: 127 -SRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADR 185
K+ + GG Q +L+ GVEI +ATPGR ID L+ +T+L R++Y+VLDEADR
Sbjct: 216 LESFKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADR 275
Query: 186 MLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHA 245
MLDMGF+PQIR+I+ + QTL +SAT P E+E L++++L P +V +G +
Sbjct: 276 MLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALSKEYLASPVQVKVGKVSSPTTN- 334
Query: 246 IKQYVDIVPEKQKYDKLVKLL-EDIMDGSRI-------LIFMDTKKGCDQITRQLRMDGW 297
+ Q + V E +K D+L+ LL E+ + ++F++ K CD++ L G
Sbjct: 335 VSQTLVKVSENEKIDRLLDLLVEEASQAEKCGHPFPLTIVFVERKTRCDEVAEALIAQGL 394
Query: 298 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFP 350
A+S+HG +SQ+ER+ L +F+S + I+ ATDVA+RGLDV V +VIN D P
Sbjct: 395 SAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASRGLDVTGVSHVINLDLP 447
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/330 (44%), Positives = 212/330 (64%), Gaps = 10/330 (3%)
Query: 38 VLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDP 97
+++++ + PT IQ+Q P+AL GRDL+G AETGSGKT A+ +P I H AQP +
Sbjct: 96 IMKDIAYHDYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRR 155
Query: 98 GDGPIVLVLAPTRELAVQIQQECTKFGAS-SRIKSTCIYGGVPKGPQVRDLQKGVEIVIA 156
GDGP+ LVLAPTRELA QI++E F S K+ + GG Q +L+ GVEI +A
Sbjct: 156 GDGPLALVLAPTRELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAVA 215
Query: 157 TPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWP 216
TPGR ID L+ +T+L R++Y+VLDEADRMLDMGF+PQIR+I+ + QTL +SAT P
Sbjct: 216 TPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSATMP 275
Query: 217 KEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLL-EDIMDGSRI 275
E+E L++++L P +V +G + + Q + V E +K D+L+ LL E+ +
Sbjct: 276 VEIEALSKEYLASPVQVKVGKVSSPTTN-VSQTLVKVSENEKIDRLLDLLVEEASQAEKC 334
Query: 276 -------LIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTA 328
++F++ K CD++ L G A+S+HG +SQ+ER+ L +F+S + I+ A
Sbjct: 335 GHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVA 394
Query: 329 TDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
TDVA+RGLDV V +VIN D P + EDY+H
Sbjct: 395 TDVASRGLDVTGVSHVINLDLPKTTEDYIH 424
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 249/423 (58%), Gaps = 22/423 (5%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
MTE + +R I+ +G +P+P++++ + + +L+ V+KAG+ P+PIQ P+
Sbjct: 260 MTERDWRIFREDYNISYKGSKIPRPMRSWVESKLSQELLKAVEKAGYKTPSPIQMAAIPL 319
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL---DPGDGPIVLVLAPTRELAVQIQ 117
L+ RD+IG+AETGSGKT A++LP + ++ P + + +GP +V+APTRELA QI+
Sbjct: 320 GLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIE 379
Query: 118 QECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTY 177
E KF IK I GG Q +++G EIVIATPGRLID LE + L + Y
Sbjct: 380 DETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLNQCNY 439
Query: 178 LVLDEADRMLDMGFDPQIRKIV-----SQIRPD------------RQTLYWSATWPKEVE 220
+VLDEADRM+DMGF+PQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 440 VVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 499
Query: 221 QLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMD 280
+LARK+L +P V IG+ KA I Q+V ++ E +K KL +LL+++ D + I +F++
Sbjct: 500 RLARKYLRNPVVVTIGTAG-KATDLISQHVIMMKESEKNYKLQRLLDELNDKTAI-VFVN 557
Query: 281 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKD 340
TKK D + + L +G+ ++HG KSQ +R+ L F++ + ++ ATDVA RG+D+ D
Sbjct: 558 TKKSADFLAKNLDKEGYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAGRGIDIPD 617
Query: 341 VKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSP 400
V +VINYD PG++E Y H F T + EL +L ++ V P
Sbjct: 618 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTDVFYELKQMLIQSNSPVPP 677
Query: 401 DLA 403
+LA
Sbjct: 678 ELA 680
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/415 (38%), Positives = 236/415 (56%), Gaps = 13/415 (3%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
M++ + D + + I V G ++P P+K F D+ FP+ +L+ +K G V+PTPIQ QG P+
Sbjct: 118 MSKKDCDLIQKQWHIIVNGEEIPPPIKNFKDMRFPDPILKMLKTKGIVQPTPIQVQGLPV 177
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILD---PGDGPIVLVLAPTRELAVQIQ 117
L GRD+IGIA TGSGKTL ++LP I+ + I+ PG+GP L++ P+RELA Q
Sbjct: 178 ILSGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEIMMPIVPGEGPFGLIICPSRELARQTY 237
Query: 118 QECTKF------GASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTN 171
+ +F ++ GG+ Q+ ++KGV IV+ATPGRL DML N
Sbjct: 238 EVIEEFLLPLKEAGYPELRPLLCIGGIDMRSQLEIVKKGVHIVVATPGRLKDMLAKKKMN 297
Query: 172 LRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPY 231
L YL LDEADR++D+GF+ IR++ + RQTL +SAT P +++ AR L P
Sbjct: 298 LDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPI 357
Query: 232 KVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQ 291
V +G AN + Q V+ V ++ K L++ L+ +LIF + K D I
Sbjct: 358 IVNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQKT--PPPVLIFCENKADVDDIHEY 414
Query: 292 LRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPG 351
L + G A++IHG K Q ER++ +S FK+GK ++ ATDVA++GLD D+++VINYD P
Sbjct: 415 LLLKGVEAVAIHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPA 474
Query: 352 SLEDYVHXXXXXXXXXXXXXXXXFFTAANARFA-KELITILEEAGQRVSPDLAAM 405
+E+YVH F + +L +L+EA QR+ P LA +
Sbjct: 475 EIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 529
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/415 (38%), Positives = 234/415 (56%), Gaps = 13/415 (3%)
Query: 1 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 60
M++ + D + I V G D+P P+K F D+ FP+ +L+ +K G V+PTPIQ QG P+
Sbjct: 120 MSKKDCDLIQKLWHIIVNGEDIPPPIKNFKDMRFPDPILKMLKTKGIVQPTPIQVQGLPV 179
Query: 61 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPI---LDPGDGPIVLVLAPTRELAVQIQ 117
L GRD+IGIA TGSGKTL ++LP I+ + I + PG+GP L++ P+ ELA Q
Sbjct: 180 ILSGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEIRMPIVPGEGPFGLIICPSWELARQTY 239
Query: 118 QECTKF------GASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTN 171
+ +F ++ GG+ Q++ ++KGV IV+ATPGRL DML N
Sbjct: 240 EVIEQFLLPLKEAGYPELRPLLCIGGIDMRSQLKIVKKGVHIVVATPGRLKDMLAKKKMN 299
Query: 172 LRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPY 231
L YL LDEADR++D GF+ IR++ + RQTL +SAT P +++ AR L P
Sbjct: 300 LDNCRYLTLDEADRLVDPGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPI 359
Query: 232 KVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQ 291
V +G AN + Q V+ V ++ K L++ L+ +LIF + K D I
Sbjct: 360 IVNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQKT--PPPVLIFCENKADVDNIHEY 416
Query: 292 LRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPG 351
L + G A++IHGDK Q +R++ +S FK+GK ++ ATD+A++GLD D+++VINYD P
Sbjct: 417 LLLKGVEAVAIHGDKDQEDREYAISSFKTGKKDVLVATDIASKGLDFPDIQHVINYDMPA 476
Query: 352 SLEDYVHXXXXXXXXXXXXXXXXFFTAANARFA-KELITILEEAGQRVSPDLAAM 405
+E+YVH F +L +L+EA QR+ P LA +
Sbjct: 477 EIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLQEAKQRIPPVLAEL 531
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/426 (37%), Positives = 249/426 (58%), Gaps = 27/426 (6%)
Query: 1 MTEAEVDEYRLRRE---ITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQG 57
+ E + ++R+ RE I+ +G +P+P++++ + + +L+ V+KAG+ P+PIQ
Sbjct: 219 LEEMQERDWRIFREDYNISYKGSKIPRPIRSWVESKLSQEILKAVEKAGYKTPSPIQMAS 278
Query: 58 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL---DPGDGPIVLVLAPTRELAV 114
P+ L+ RD+IG+AETGSGKT A++LP + ++ P + + +GP +V+APTRELA
Sbjct: 279 IPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQ 338
Query: 115 QIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRR 174
QI+ E KF IK I GG Q +++G EIVIATPGRLID LE + L +
Sbjct: 339 QIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLNQ 398
Query: 175 VTYLVLDEADRMLDMGFDPQIRKIV-----SQIRPD------------RQTLYWSATWPK 217
Y+VLDEADRM+DMGF+PQ+ ++ S ++P+ R T +SAT P
Sbjct: 399 CNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 458
Query: 218 EVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILI 277
VE+LARK+L +P V IG+ KA I Q+V ++ E +K L +LL+ + D + I +
Sbjct: 459 GVERLARKYLRNPVVVTIGTAG-KATDLISQHVIMMKESEKNYNLHRLLDQLNDKTAI-V 516
Query: 278 FMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLD 337
F++TKK D + + L +G+ ++HG KSQ +R+ L F++ + ++ ATDVA RG+D
Sbjct: 517 FVNTKKSADFLAKNL--EGYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAGRGID 574
Query: 338 VKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQR 397
+ DV +VINYD PG++E Y H F T + EL +L ++
Sbjct: 575 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTDVFYELKQMLIQSNSP 634
Query: 398 VSPDLA 403
V +LA
Sbjct: 635 VPHELA 640
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/426 (37%), Positives = 249/426 (58%), Gaps = 27/426 (6%)
Query: 1 MTEAEVDEYRLRRE---ITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQG 57
+ E + ++R+ RE I+ +G +P+P++++ + + +L+ V+KAG+ P+PIQ
Sbjct: 219 LEEMQERDWRIFREDYNISYKGSKIPRPIRSWVESKLSQEILKAVEKAGYKTPSPIQMAS 278
Query: 58 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL---DPGDGPIVLVLAPTRELAV 114
P+ L+ RD+IG+AETGSGKT A++LP + ++ P + + +GP +V+APTRELA
Sbjct: 279 IPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQ 338
Query: 115 QIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRR 174
QI+ E KF IK I GG Q +++G EIVIATPGRLID LE + L +
Sbjct: 339 QIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLNQ 398
Query: 175 VTYLVLDEADRMLDMGFDPQIRKIV-----SQIRPD------------RQTLYWSATWPK 217
Y+VLDEADRM+DMGF+PQ+ ++ S ++P+ R T +SAT P
Sbjct: 399 CNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 458
Query: 218 EVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILI 277
VE+LARK+L +P V IG+ KA I Q+V ++ E +K L +LL+ + D + I +
Sbjct: 459 GVERLARKYLRNPVVVTIGTAG-KATDLISQHVIMMKESEKNYNLHRLLDQLNDKTAI-V 516
Query: 278 FMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLD 337
F++TKK D + + L +G+ ++HG KSQ +R+ L F++ + ++ ATDVA RG+D
Sbjct: 517 FVNTKKSADFLAKNL--EGYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAGRGID 574
Query: 338 VKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQR 397
+ DV +VINYD PG++E Y H F T + EL +L ++
Sbjct: 575 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTDVFYELKQMLIQSNSP 634
Query: 398 VSPDLA 403
V +LA
Sbjct: 635 VPHELA 640
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/426 (37%), Positives = 249/426 (58%), Gaps = 27/426 (6%)
Query: 1 MTEAEVDEYRLRRE---ITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQG 57
+ E + ++R+ RE I+ +G +P+P++++ + + +L+ V+KAG+ P+PIQ
Sbjct: 219 LEEMQERDWRIFREDYNISYKGSKIPRPIRSWVESKLSQEILKAVEKAGYKTPSPIQMAS 278
Query: 58 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL---DPGDGPIVLVLAPTRELAV 114
P+ L+ RD+IG+AETGSGKT A++LP + ++ P + + +GP +V+APTRELA
Sbjct: 279 IPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQ 338
Query: 115 QIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRR 174
QI+ E KF IK I GG Q +++G EIVIATPGRLID LE + L +
Sbjct: 339 QIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLNQ 398
Query: 175 VTYLVLDEADRMLDMGFDPQIRKIV-----SQIRPD------------RQTLYWSATWPK 217
Y+VLDEADRM+DMGF+PQ+ ++ S ++P+ R T +SAT P
Sbjct: 399 CNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 458
Query: 218 EVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILI 277
VE+LARK+L +P V IG+ KA I Q+V ++ E +K L +LL+ + D + I +
Sbjct: 459 GVERLARKYLRNPVVVTIGTAG-KATDLISQHVIMMKESEKNYNLHRLLDQLNDKTAI-V 516
Query: 278 FMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLD 337
F++TKK D + + L +G+ ++HG KSQ +R+ L F++ + ++ ATDVA RG+D
Sbjct: 517 FVNTKKSADFLAKNL--EGYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAGRGID 574
Query: 338 VKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQR 397
+ DV +VINYD PG++E Y H F T + EL +L ++
Sbjct: 575 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTDVFYELKQMLIQSNSP 634
Query: 398 VSPDLA 403
V +LA
Sbjct: 635 VPHELA 640
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 201/331 (60%), Gaps = 9/331 (2%)
Query: 32 VGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLP---AIVH 88
+G + ++ ++K G + PIQ A++GRD+IG A TG+GKTLA+ +P I+
Sbjct: 85 LGISQDIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQ 144
Query: 89 VNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQ 148
NA+ G P+ LVLAPTRELA Q+++E + A+ + + C+YGG P Q+R L
Sbjct: 145 FNAKH--GRGKDPLALVLAPTRELAKQVEKEF--YEAAPNLDTICVYGGTPISQQMRQLD 200
Query: 149 KGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQT 208
GV+I + TPGR+ID+L NL+ V +++LDEAD+ML +GF + KI+ ++ +RQT
Sbjct: 201 YGVDIAVGTPGRIIDLLNRGALNLKEVQFVILDEADQMLQVGFQEDVEKILERLPAERQT 260
Query: 209 LYWSATWPKEVEQLARKFLYDPYKV-IIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE 267
L +SAT P ++QL R +L +P + ++G D K I Y + K +V L++
Sbjct: 261 LMFSATMPTWIKQLTRNYLKNPLTIDLVGDSDQKLADGISLYSILSDAYVKAGIIVPLIK 320
Query: 268 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 327
+ G + ++F TK+ D+I+ + P ++HGD SQ +R+ L+ F++G ++
Sbjct: 321 EHAKGGKCIVFTQTKRDADRISHGMS-KSIPCEALHGDISQIQRERTLAGFRNGHFNVLV 379
Query: 328 ATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
ATDVA+RGLD+ +V VI+Y+ P + E +VH
Sbjct: 380 ATDVASRGLDIPNVDLVIHYELPNNSEIFVH 410
>Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641167-30650711 | 20130731
Length = 438
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 196/336 (58%), Gaps = 6/336 (1%)
Query: 24 KPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLL 83
K +K+F D+G PE ++E +K G+ P IQ + P AL+G+DLIG+AETGSGKT A+ L
Sbjct: 6 KEMKSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFAL 65
Query: 84 PAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQ 143
P + + P + V++PTRELA+QI ++ G+ +K + GG+ Q
Sbjct: 66 PILHALLEAP---RPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQ 122
Query: 144 VRDLQKGVEIVIATPGRLIDMLESHHT-NLRRVTYLVLDEADRMLDMGFDPQIRKIVSQI 202
+ K I++ TPGR++D L++ +L R+ YLVLDEADR+L+ F+ + +I+ I
Sbjct: 123 SVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMI 182
Query: 203 RPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKL 262
+R+T +SAT K+VE+L R L +P K+ S+ + +KQ +P K K L
Sbjct: 183 PRERRTFLFSATMTKKVEKLQRVCLRNPVKIETSSKYSTVD-TLKQQYRFLPAKHKDCYL 241
Query: 263 VKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGK 322
V +L + M GS ++F T + LR G A+ I+G SQ +R L++FKSG
Sbjct: 242 VYILTE-MAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGD 300
Query: 323 SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
I+ TDVA+RGLD+ V VINYD P + +DY+H
Sbjct: 301 CNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIH 336
>Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641166-30650890 | 20130731
Length = 438
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 196/336 (58%), Gaps = 6/336 (1%)
Query: 24 KPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLL 83
K +K+F D+G PE ++E +K G+ P IQ + P AL+G+DLIG+AETGSGKT A+ L
Sbjct: 6 KEMKSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFAL 65
Query: 84 PAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQ 143
P + + P + V++PTRELA+QI ++ G+ +K + GG+ Q
Sbjct: 66 PILHALLEAP---RPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQ 122
Query: 144 VRDLQKGVEIVIATPGRLIDMLESHHT-NLRRVTYLVLDEADRMLDMGFDPQIRKIVSQI 202
+ K I++ TPGR++D L++ +L R+ YLVLDEADR+L+ F+ + +I+ I
Sbjct: 123 SVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMI 182
Query: 203 RPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKL 262
+R+T +SAT K+VE+L R L +P K+ S+ + +KQ +P K K L
Sbjct: 183 PRERRTFLFSATMTKKVEKLQRVCLRNPVKIETSSKYSTVD-TLKQQYRFLPAKHKDCYL 241
Query: 263 VKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGK 322
V +L + M GS ++F T + LR G A+ I+G SQ +R L++FKSG
Sbjct: 242 VYILTE-MAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGD 300
Query: 323 SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
I+ TDVA+RGLD+ V VINYD P + +DY+H
Sbjct: 301 CNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIH 336
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 213/401 (53%), Gaps = 15/401 (3%)
Query: 10 RLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIG 69
R + +I V+G V PV +F P+ +L+ ++ AG+ PTP+Q Q P AL G++++
Sbjct: 123 RKKLDIHVKGV-VSAPVMSFASCNLPDKLLQNIEAAGYEMPTPVQMQAIPAALVGKNMLV 181
Query: 70 IAETGSGKTLAYLLPAIVHVNAQPILDPGDG--PIVLVLAPTRELAVQIQQECTKFGASS 127
+A+TGSGK+ ++L+P I + ++ D P+ +VL PTREL++Q+++ G
Sbjct: 182 LADTGSGKSASFLIPIISRCASHRLMYVSDNKKPLAMVLTPTRELSIQVEEHAKLLGKGL 241
Query: 128 RIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRML 187
K+ + GG Q+ +Q+GVE+++ TPGRL+D+L + +L VT V+DE D ML
Sbjct: 242 PFKTALVVGGDAMARQLYRIQQGVELIVGTPGRLVDLLTKNEIDLDDVTTFVVDEVDCML 301
Query: 188 DMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIK 247
GF Q+ +I + + Q L +SAT +E++A D + +G E + N A+K
Sbjct: 302 QRGFRDQVLQIFTALS-QPQVLMYSATTSDSLEKMANSMAKDTVVITVG-EPNRPNKAVK 359
Query: 248 QYVDIVPEKQKYDKLVKLLEDIMDGSR-----ILIFMDTKKGCDQITRQLRMD-GWPALS 301
Q V KQK KL DI+ + ++I++ ++ G D + + + G A+S
Sbjct: 360 QLAIWVESKQKKQKLF----DILKSQKHFKPPVVIYVGSRLGADLLANAITVSTGVKAVS 415
Query: 302 IHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXX 361
IHG+KS ER ++ F G+ P++ AT V RG+D+ V+ VI +D P S+ +YVH
Sbjct: 416 IHGEKSMTERREIMQSFMVGEFPVVVATGVLGRGVDLLGVRQVIVFDMPNSINEYVHQIG 475
Query: 362 XXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDL 402
F N EL+ +L+ + +L
Sbjct: 476 RASRMGEEGQAIVFVNDENKNVFPELVDVLKSGAAAIPREL 516
>Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:20527189-20518464 | 20130731
Length = 438
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 195/336 (58%), Gaps = 6/336 (1%)
Query: 24 KPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLL 83
K +K+F D+G PE ++E +K G+ P IQ + P AL+G+DLIG+A+TGSGKT A+ L
Sbjct: 6 KEMKSFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFAL 65
Query: 84 PAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQ 143
P + + P + V++PTRELA+QI ++ G+ +K + GG+ Q
Sbjct: 66 PILHALLEAP---RPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQ 122
Query: 144 VRDLQKGVEIVIATPGRLIDMLESHHT-NLRRVTYLVLDEADRMLDMGFDPQIRKIVSQI 202
+ K I++ TPGR++D L++ +L R+ YLVLDEADR+L+ F+ + +I+ I
Sbjct: 123 SVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMI 182
Query: 203 RPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKL 262
+R+T +SAT +VE+L R L +P K+ S+ + +KQ +P K K L
Sbjct: 183 PRERRTFLFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVD-TLKQQYRFLPAKHKDCYL 241
Query: 263 VKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGK 322
V +L + M GS ++F T + LR G A+ I+G SQ +R L++FKSG
Sbjct: 242 VYILSE-MAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGD 300
Query: 323 SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
I+ TDVA+RGLD+ V VINYD P + +DY+H
Sbjct: 301 CNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIH 336
>Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:15371233-15366440 | 20130731
Length = 406
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 191/337 (56%), Gaps = 10/337 (2%)
Query: 24 KPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKT--LAY 81
K + +F ++G + +L + + GF +P+ IQ + ++GRD+I A++G+GKT +A
Sbjct: 30 KAIGSFEEMGIKDDLLRGIYQYGFEKPSAIQQRAVAPIIQGRDVIAQAQSGTGKTSMIAL 89
Query: 82 LLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKG 141
+ +V + + + L+++PTRELA Q ++ G I++ GG G
Sbjct: 90 TVCQVVDTSVREVQ-------ALIVSPTRELASQTEKVILTIGDFINIQAHACIGGKSVG 142
Query: 142 PQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ 201
+R L+ GV +V TPGR+ DM++ R + LVLDE+D ML GF QI +
Sbjct: 143 EDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 202
Query: 202 IRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDK 261
+ PD Q SAT P E+ ++ KF+ DP ++++ ++L + +V + E+ K+D
Sbjct: 203 LPPDLQVCLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDT 262
Query: 262 LVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSG 321
L L D + ++ +IF +TK+ D +T ++R + + ++HGD Q ERD ++ EF++G
Sbjct: 263 LCDLY-DTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVSAMHGDMPQRERDAIMGEFRAG 321
Query: 322 KSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
+ ++ TDV ARGLDV+ V VINYD P + E Y+H
Sbjct: 322 TTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIH 358
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 190/331 (57%), Gaps = 9/331 (2%)
Query: 32 VGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLP---AIVH 88
+G + ++ + K G + PIQ A++GRD+IG A TG+GKTLA+ +P I+
Sbjct: 94 LGISKEIVNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK 153
Query: 89 VNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQ 148
NA+ P+ LVLAPTRELA Q+++E A+ ++ +YGG+P Q+ L
Sbjct: 154 FNAKN--GKRRDPLALVLAPTRELARQVEKEFKD--AAPNLEIISLYGGMPIQQQISKLG 209
Query: 149 KGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQT 208
GV+IV+ TPGR+ID+L+ L+ V Y+VLDEAD+ML +GF + I+ ++ RQT
Sbjct: 210 SGVDIVVGTPGRVIDLLKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETILQKLPSKRQT 269
Query: 209 LYWSATWPKEVEQLARKFLYDPYKV-IIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE 267
L +SAT P ++ L R +L P + ++G D K I Y K LV L+
Sbjct: 270 LMFSATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSKAGILVPLIT 329
Query: 268 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 327
+ G + ++F TK+ D+++ + ++HGD SQ +R+ L+ F++ ++
Sbjct: 330 EHAKGGKCIVFTQTKRDADRLS-HIMAKSIKCEALHGDISQTQRERTLTGFRNSYFNVLV 388
Query: 328 ATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
ATDVA+RGLD+ +V VI+Y+ P + E +VH
Sbjct: 389 ATDVASRGLDIPNVDLVIHYELPNNSEIFVH 419
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 190/331 (57%), Gaps = 9/331 (2%)
Query: 32 VGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLP---AIVH 88
+G + ++ + K G + PIQ A++GRD+IG A TG+GKTLA+ +P I+
Sbjct: 94 LGISKEIVNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIK 153
Query: 89 VNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQ 148
NA+ P+ LVLAPTRELA Q+++E A+ ++ +YGG+P Q+ L
Sbjct: 154 FNAKN--GKRRDPLALVLAPTRELARQVEKEFKD--AAPNLEIISLYGGMPIQQQISKLG 209
Query: 149 KGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQT 208
GV+IV+ TPGR+ID+L+ L+ V Y+VLDEAD+ML +GF + I+ ++ RQT
Sbjct: 210 SGVDIVVGTPGRVIDLLKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETILQKLPSKRQT 269
Query: 209 LYWSATWPKEVEQLARKFLYDPYKV-IIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE 267
L +SAT P ++ L R +L P + ++G D K I Y K LV L+
Sbjct: 270 LMFSATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSKAGILVPLIT 329
Query: 268 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 327
+ G + ++F TK+ D+++ + ++HGD SQ +R+ L+ F++ ++
Sbjct: 330 EHAKGGKCIVFTQTKRDADRLS-HIMAKSIKCEALHGDISQTQRERTLTGFRNSYFNVLV 388
Query: 328 ATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
ATDVA+RGLD+ +V VI+Y+ P + E +VH
Sbjct: 389 ATDVASRGLDIPNVDLVIHYELPNNSEIFVH 419
>Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:27664451-27658107 | 20130731
Length = 513
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 187/336 (55%), Gaps = 11/336 (3%)
Query: 28 TFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 87
TF+D+G E+ ++ K+ G P +Q P L GR +IGI +TGSGKT A+ LP +
Sbjct: 53 TFSDLGLSEWAVKTCKELGMKTPRRVQQHCIPQILAGRHVIGIDQTGSGKTAAFALPIL- 111
Query: 88 HVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDL 147
Q + + G LV+ PTRELA Q+ ++ G+S R++ + GG+ Q ++L
Sbjct: 112 ----QRLAEHTFGVFALVVTPTRELAFQLAEQFRALGSSLRLRIAVVVGGMDMLRQTKEL 167
Query: 148 QKGVEIVIATPGRLIDMLESH---HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRP 204
+VIATPGR+ +L+ + R +LVLDEADR+LD+GF +++ I +
Sbjct: 168 VARPHLVIATPGRIKVLLKDNPEIAPVFARTKFLVLDEADRVLDVGFQDELKFIFQCLPE 227
Query: 205 DRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVK 264
+RQ L++SAT +++L ++ D E K +KQ V +P+ K L+
Sbjct: 228 NRQNLFFSATTTSNLQKLRERY-QDKLYAFEAYEGFKTVENLKQQVVFIPKNVKDVYLLH 286
Query: 265 LLEDIMD-GSR-ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGK 322
+L + D G R ++F+ T + C ++ L + A +++ +SQA+R L +FKSGK
Sbjct: 287 ILSKMEDMGIRSAIVFVSTCRDCHRLNLMLEVLDQEAAALYSFRSQAQRLEALHDFKSGK 346
Query: 323 SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
P++ ATDVA RGLD+ V VINYD P DY+H
Sbjct: 347 VPVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYIH 382
>Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:46249372-46245255 | 20130731
Length = 641
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 190/344 (55%), Gaps = 29/344 (8%)
Query: 40 EEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHV---------- 89
E++K+ G PIQ+ + + L+G DL+G A TG GKTLA++LP + V
Sbjct: 56 EKLKEKGIESLFPIQAMTFDIILQGCDLVGRARTGQGKTLAFVLPILESVTNGKAKETNA 115
Query: 90 -------NAQPILDPGDG----PIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGV 138
NA+ G G P VLVL PTRELA Q+ + +G + + S C+YGG
Sbjct: 116 KTKETNGNARESRKGGYGGPPKPSVLVLLPTRELACQVNADFEVYGGAMGLTSCCLYGGA 175
Query: 139 PKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKI 198
P Q L++GV+IVI TPGR+ D + +L ++ + VLDEAD ML MGF + I
Sbjct: 176 PYKAQEIKLERGVDIVIGTPGRIKDHIVRGSIDLSQLKFRVLDEADEMLRMGFVEDVELI 235
Query: 199 VSQIRP--DRQTLYWSATWPKEVEQLARKFLYDPYKV--IIGSEDLKANHAIKQYVDIVP 254
+ +++ QTL +SAT P+ V+ +A++FL + + ++G+ +KA+ +++ Y+
Sbjct: 236 LGKVKNVDQVQTLLFSATLPEWVKNIAKRFLKEDKQTADLVGNTKMKASTSVRHYILPCT 295
Query: 255 EKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWV 314
+ + ++ R +IF +TK+ Q+ L A ++HGD QA+R+
Sbjct: 296 GAARSQLIPDIIRCYSSEGRTIIFTETKESASQLAELL----PGARALHGDIQQAQREVT 351
Query: 315 LSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
LS F+ GK + AT+VAARGLD+ DV+ +I + P +E Y+H
Sbjct: 352 LSGFRYGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIH 395
>Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:40632868-40627375 | 20130731
Length = 619
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 208/402 (51%), Gaps = 26/402 (6%)
Query: 9 YRLRREITVEGRDVPKPVKTFNDVG----FPEYVLEEVKKAGFVEPTPIQSQGWPMALKG 64
+R I V G +VP P+++F+++ P Y+L ++ + GF EPTPIQ Q P+ L+
Sbjct: 111 FRKNHNIHVSGYNVPSPLQSFDELKTRYKCPSYLLWKLAELGFREPTPIQRQAIPVLLQD 170
Query: 65 RDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFG 124
R+ A TGSGKTLA++ P ++ + A G +++ +REL+ Q +EC K
Sbjct: 171 RECFACAPTGSGKTLAFVCPMLMKLKAHA----KGGVRAVIICHSRELSGQTYRECKKLA 226
Query: 125 ASSRIKSTCIYGGVPKGPQVRDLQK-GVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEA 183
+ + + + + D K +I+I+TP RL ++ +L RV YLVLDE+
Sbjct: 227 KGEKFRIKLMTKNLLRNA---DFSKFSCDILISTPLRLCLAIKKKKVDLSRVEYLVLDES 283
Query: 184 DRMLDMGFDPQIRKIVSQI-----RPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSE 238
D++ F+PQ+ K + I P +SAT P VE AR+ ++D +VI+G +
Sbjct: 284 DKL----FEPQLFKQIDSIIKACTNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRK 339
Query: 239 DLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSR--ILIFMDTKKGCDQITRQLRMDG 296
++ A+ IKQ +V + KL+ + + + +L+F+ +K+ ++ +L D
Sbjct: 340 NM-ASDTIKQ--KLVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAFDN 396
Query: 297 WPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDY 356
IH D SQ ER+ + F++GK+ ++ ATDV ARG+D K + VINYDFP S Y
Sbjct: 397 IRVDVIHSDLSQEERENAVDNFRAGKTWVLIATDVVARGMDFKGINCVINYDFPDSASAY 456
Query: 357 VHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRV 398
+H F+T + F + + ++ +G V
Sbjct: 457 IHRIGRSGRAGRSGEAITFYTEEDIPFLRNVSNLMASSGCEV 498
>Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:20125418-20119486 | 20130731
Length = 681
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 192/348 (55%), Gaps = 16/348 (4%)
Query: 20 RDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTL 79
+D P V F E + ++K+ PIQ+ + L G DL+G A TG GKTL
Sbjct: 98 KDDPNAVSNFR---ISEPLRMKLKENKIEALFPIQAMTFNTILDGSDLVGRARTGQGKTL 154
Query: 80 AYLLPAIVHVN---AQPILDPGDG--PIVLVLAPTRELAVQIQQECTKFGASSRIKSTCI 134
A++LP + + A+ + G G P V+VL PTRELA Q+ + +G+S + + +
Sbjct: 155 AFVLPILESLTNGPAKSVRKTGYGRVPSVIVLLPTRELANQVYADFELYGSSLGLSACAV 214
Query: 135 YGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQ 194
YGG P G Q L++GV+IVI TPGR+ D +E + +L + + VLDEAD ML MGF
Sbjct: 215 YGGAPYGAQETKLRRGVDIVIGTPGRIKDHIERGNIDLSHLKFRVLDEADEMLRMGFVDD 274
Query: 195 IRKIVSQIR--PDRQTLYWSATWPKEVEQLARKFLYDPYKV--IIGSEDLKANHAIKQYV 250
+ I+ +++ QTL +SAT P V+Q++ KFL K ++G+E +KA+ ++ +
Sbjct: 275 VELILGKVQDVTKVQTLLFSATLPSWVKQISTKFLKSDKKTADLVGNEKMKASTNVRHII 334
Query: 251 DIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAE 310
+ + ++ G R +IF + K+ ++ L A ++HGD Q++
Sbjct: 335 LPCSSTARAQLIPDIIRCYSSGGRTIIFAEKKESASELAGLL----PGARALHGDIQQSQ 390
Query: 311 RDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
R+ L F+SGK + AT+VAARGLD+ DV+ +I + P +E Y+H
Sbjct: 391 REITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIH 438
>Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 413
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 186/365 (50%), Gaps = 14/365 (3%)
Query: 27 KTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 86
+TF+ +G E +L + GF +P+ IQ +G +KG D+I A++G+GKT +
Sbjct: 40 ETFDAMGLLENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATF----- 94
Query: 87 VHVNAQPILDPGDGPIV----LVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGP 142
IL D +V LVLAPTRELA QI++ G +K GG
Sbjct: 95 ----CSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 150
Query: 143 QVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQI 202
R LQ GV +V+ TPGR+ DML + VLDEAD ML GF QI I +
Sbjct: 151 DQRILQTGVHVVVGTPGRVFDMLRRQSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQLL 210
Query: 203 RPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKL 262
P Q +SAT P E ++ RKF+ P ++++ ++L + YV++ E+ K + L
Sbjct: 211 PPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETL 270
Query: 263 VKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGK 322
L E + ++ +IF++T++ D +T ++R + HGD Q RD ++ EF+SG
Sbjct: 271 CDLYETLAI-TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGS 329
Query: 323 SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANAR 382
S ++ TD+ ARG+DV+ V VINYD P E+Y+H F T +AR
Sbjct: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLEDAR 389
Query: 383 FAKEL 387
++
Sbjct: 390 MLADI 394
>Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 397
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 186/365 (50%), Gaps = 14/365 (3%)
Query: 27 KTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 86
+TF+ +G E +L + GF +P+ IQ +G +KG D+I A++G+GKT +
Sbjct: 24 ETFDAMGLLENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATF----- 78
Query: 87 VHVNAQPILDPGDGPIV----LVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGP 142
IL D +V LVLAPTRELA QI++ G +K GG
Sbjct: 79 ----CSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 134
Query: 143 QVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQI 202
R LQ GV +V+ TPGR+ DML + VLDEAD ML GF QI I +
Sbjct: 135 DQRILQTGVHVVVGTPGRVFDMLRRQSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQLL 194
Query: 203 RPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKL 262
P Q +SAT P E ++ RKF+ P ++++ ++L + YV++ E+ K + L
Sbjct: 195 PPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETL 254
Query: 263 VKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGK 322
L E + ++ +IF++T++ D +T ++R + HGD Q RD ++ EF+SG
Sbjct: 255 CDLYETLAI-TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGS 313
Query: 323 SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANAR 382
S ++ TD+ ARG+DV+ V VINYD P E+Y+H F T +AR
Sbjct: 314 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLEDAR 373
Query: 383 FAKEL 387
++
Sbjct: 374 MLADI 378
>Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6253262-6248871 | 20130731
Length = 413
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 182/364 (50%), Gaps = 14/364 (3%)
Query: 28 TFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 87
+F+ +G E +L + GF P+ IQ +G KG D+I A++G+GKT +
Sbjct: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF------ 94
Query: 88 HVNAQPILDPGDGPIV----LVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQ 143
IL D +V LVLAPTRELA QI++ G +K GG
Sbjct: 95 ---CSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDFLGVKVHACVGGTSVRED 151
Query: 144 VRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIR 203
R LQ GV V+ TPGR+ DML + VLDEAD ML GF QI I Q+
Sbjct: 152 QRILQAGVHTVVGTPGRVFDMLRRQSLRSECIKMFVLDEADEMLSRGFKDQIYDIFQQLP 211
Query: 204 PDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLV 263
Q +SAT P E ++ RKF+ P ++++ ++L + YV++ E+ K + L
Sbjct: 212 GKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLC 271
Query: 264 KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKS 323
L E + ++ +IF++T++ D +T ++R + HGD Q RD ++ EF+SG S
Sbjct: 272 DLYETLAI-TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 330
Query: 324 PIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARF 383
++ TD+ ARG+DV+ V VINYD P E+Y+H F T +AR
Sbjct: 331 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTGEDARM 390
Query: 384 AKEL 387
++
Sbjct: 391 LADI 394
>Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:30630772-30640503 | 20130731
Length = 787
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 197/367 (53%), Gaps = 6/367 (1%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F +G V +K+ G+ PTPIQ + P+ L G D++ +A TGSGKT A+L+P +
Sbjct: 20 FETLGLNRDVFSGIKRKGYKVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLVPMLHR 79
Query: 89 VNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQ 148
+N P G L+L+PTR+LA Q + + G + ++ + + GG Q +L
Sbjct: 80 LNQHV---PQGGVRGLILSPTRDLAQQTLKFTKELGHFTDLRVSLLVGGDSMESQFEELA 136
Query: 149 KGVEIVIATPGRLIDML-ESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQ 207
+ +I+IATPGRL+ L E +LR+V Y+V DEAD + MGF Q+ +I++Q+ +RQ
Sbjct: 137 QNPDIIIATPGRLMHHLSEVDDMSLRKVEYVVFDEADCLFGMGFAEQLHQILAQLGENRQ 196
Query: 208 TLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE 267
TL +SAT P + + A+ L DP V + E K + +K + +++KY L+ L+
Sbjct: 197 TLLFSATLPSALAEFAKAGLRDPRLVRLDLE-TKISPDLKLVFFTLRQEEKYAALLYLIR 255
Query: 268 DIMDG-SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIM 326
+++ + LIF+ TK + + +++G +GD Q R ++ F+S K+ ++
Sbjct: 256 ELIGSDEQTLIFVSTKHHVEFLNSLFQLEGIRPSVCYGDMDQDARKEHVARFRSRKTMLL 315
Query: 327 TATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKE 386
TD+AARG+D+ + VIN+DFP + +VH F TA + + +
Sbjct: 316 IVTDIAARGIDIPLLDNVINWDFPPKPKIFVHRVGRVARAGRTGTAYSFLTAEDMAYLLD 375
Query: 387 LITILEE 393
L L +
Sbjct: 376 LHLFLSK 382
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 175/335 (52%), Gaps = 14/335 (4%)
Query: 28 TFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 87
+F+ +G E +L + GF +P+ IQ +G +KG D+I A++G+GKT +
Sbjct: 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATF------ 94
Query: 88 HVNAQPILDPGDGPIV----LVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQ 143
IL D + LVLAPTRELA QI++ G +K GG
Sbjct: 95 ---CSGILQQLDYSVTECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 151
Query: 144 VRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIR 203
R L GV +V+ TPGR+ DML + VLDEAD ML GF QI I +
Sbjct: 152 QRILSSGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLP 211
Query: 204 PDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLV 263
Q +SAT P E ++ RKF+ P ++++ ++L + YV++ E+ K D L
Sbjct: 212 SKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLDTLC 271
Query: 264 KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKS 323
L E + ++ +IF++T++ D +T ++R + HGD Q RD ++ EF+SG S
Sbjct: 272 DLYETLA-ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 330
Query: 324 PIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
++ TD+ ARG+DV+ V VINYD P E+Y+H
Sbjct: 331 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLH 365
>Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:18030127-18021965 | 20130731
Length = 747
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 200/383 (52%), Gaps = 14/383 (3%)
Query: 28 TFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 87
+F + +L + G+ +PTPIQ+ P+AL GRD+ G A TGSGKT A+ LP +
Sbjct: 141 SFLQLNLSRSLLLACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLE 200
Query: 88 HVNAQPILDPGDGPI-VLVLAPTRELAVQIQ---QECTKFGASSRIKSTCIYGGVPKGPQ 143
+ +P G I VL+L PTRELAVQ+ +E KF + I+ I GGVP Q
Sbjct: 201 RLLFRP---KGVHAIRVLILTPTRELAVQVHSMIEELAKF--TDNIRCCLIVGGVPTKGQ 255
Query: 144 VRDLQKGVEIVIATPGRLIDML-ESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQI 202
L+ +IV+ATPGR+ID L S +L + L+LDEADR+L++GF +I+++V
Sbjct: 256 EAALRSRPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIQELVRVC 315
Query: 203 RPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQ-KYDK 261
RQT+ +SAT +EV+ L + L P ++ + ++ V I ++ ++
Sbjct: 316 PKKRQTMLFSATMTEEVDDLIKLSLSKPVRLSADPSAKRPASLTEEVVRIRRMREVNHEA 375
Query: 262 LVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSG 321
++ + S+++IF TK+ ++ + G A +HG+ +QA+R L +F+
Sbjct: 376 VLLAMCTKTFTSKVIIFSGTKQAAHRLRIIFGLSGLKAAELHGNLTQAQRLDALEQFRKQ 435
Query: 322 KSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANA 381
+ + ATDVAARGLD+ V+ VIN+ P L YVH F T ++
Sbjct: 436 QVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVTDSDR 495
Query: 382 RFAKELITILEEAGQRVSPDLAA 404
K I + AG ++ + A
Sbjct: 496 SLLK---AIAKRAGSKLKSRIVA 515
>Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52325320-52330070 | 20130731
Length = 413
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 174/331 (52%), Gaps = 6/331 (1%)
Query: 28 TFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 87
+F+ +G E +L + GF +P+ IQ +G KG D+I A++G+GKT + +
Sbjct: 41 SFDAMGLAENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100
Query: 88 HVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDL 147
++ LVLAPTRELA QI++ G +K GG R L
Sbjct: 101 QLDYNVTQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 155
Query: 148 QKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQ 207
GV +V+ TPGR+ DML + + VLDEAD ML GF QI I + Q
Sbjct: 156 STGVHVVVGTPGRVFDMLRRQSLHPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQ 215
Query: 208 TLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE 267
+SAT P E ++ RKF+ P ++++ ++L + YV++ E+ K D L L E
Sbjct: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYE 275
Query: 268 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 327
+ ++ +IF++T++ D +T ++R + HGD Q RD ++ EF+SG S ++
Sbjct: 276 TLAI-TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 334
Query: 328 ATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
TD+ ARG+DV+ V VIN+D P E+Y+H
Sbjct: 335 TTDLLARGIDVQQVSLVINFDLPTQPENYLH 365
>Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52326072-52330070 | 20130731
Length = 430
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 174/331 (52%), Gaps = 6/331 (1%)
Query: 28 TFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 87
+F+ +G E +L + GF +P+ IQ +G KG D+I A++G+GKT + +
Sbjct: 58 SFDAMGLAENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 117
Query: 88 HVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDL 147
++ LVLAPTRELA QI++ G +K GG R L
Sbjct: 118 QLDYNVTQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 172
Query: 148 QKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQ 207
GV +V+ TPGR+ DML + + VLDEAD ML GF QI I + Q
Sbjct: 173 STGVHVVVGTPGRVFDMLRRQSLHPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQ 232
Query: 208 TLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE 267
+SAT P E ++ RKF+ P ++++ ++L + YV++ E+ K D L L E
Sbjct: 233 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYE 292
Query: 268 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 327
+ ++ +IF++T++ D +T ++R + HGD Q RD ++ EF+SG S ++
Sbjct: 293 TLAI-TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 351
Query: 328 ATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
TD+ ARG+DV+ V VIN+D P E+Y+H
Sbjct: 352 TTDLLARGIDVQQVSLVINFDLPTQPENYLH 382
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 173/331 (52%), Gaps = 10/331 (3%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F D +L + + GF P+PIQ + P+AL G D++ A+ G+GKT A+ +PA+
Sbjct: 142 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEK 201
Query: 89 VNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDL 147
+ D + I V++L PTRELA+Q Q C + G +I+ GG + L
Sbjct: 202 I------DQDNNIIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRL 255
Query: 148 QKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQ 207
+ V +++ TPGR++D+ + L+ + LV+DEAD++L F P I +++ + P RQ
Sbjct: 256 YQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPTRQ 315
Query: 208 TLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE 267
L +SAT+P V+ ++L PY II D I Q+ V E+QK L L
Sbjct: 316 ILMFSATFPVTVKDFKDRYLRKPY--IINLMDELTLKGITQFYAFVEERQKVHCLNTLFS 373
Query: 268 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 327
+ I IF ++ + + +++ G+ IH Q R+ V +F++G +
Sbjct: 374 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 432
Query: 328 ATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
TD+ RG+D++ V VIN+DFP + E Y+H
Sbjct: 433 CTDLFTRGIDIQAVNVVINFDFPKNSETYLH 463
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 173/331 (52%), Gaps = 10/331 (3%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F D +L + + GF P+PIQ + P+AL G D++ A+ G+GKT A+ +PA+
Sbjct: 144 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEK 203
Query: 89 VNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDL 147
+ D + I V++L PTRELA+Q Q C + G +I+ GG + L
Sbjct: 204 I------DQDNNIIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRL 257
Query: 148 QKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQ 207
+ V +++ TPGR++D+ + L+ + LV+DEAD++L F P I +++ + P RQ
Sbjct: 258 YQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPTRQ 317
Query: 208 TLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE 267
L +SAT+P V+ ++L PY II D I Q+ V E+QK L L
Sbjct: 318 ILMFSATFPVTVKDFKDRYLRKPY--IINLMDELTLKGITQFYAFVEERQKVHCLNTLFS 375
Query: 268 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 327
+ I IF ++ + + +++ G+ IH Q R+ V +F++G +
Sbjct: 376 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 434
Query: 328 ATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
TD+ RG+D++ V VIN+DFP + E Y+H
Sbjct: 435 CTDLFTRGIDIQAVNVVINFDFPKNSETYLH 465
>Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:19680414-19670656 | 20130731
Length = 760
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 183/340 (53%), Gaps = 18/340 (5%)
Query: 28 TFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 87
+F + +L + G+ +PTPIQ+ P+AL GRD+ G A TGSGKT A+ LP +
Sbjct: 152 SFLQLNLSRPLLRACEVLGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLE 211
Query: 88 HVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDL 147
+ +P VL+L PTRELA Q+Q + I+ I GG+ Q L
Sbjct: 212 RLLFRP--KRVHAIRVLILTPTRELAAQVQSMIKSLSQFTDIRCCLIVGGLSTKEQEVAL 269
Query: 148 QKGVEIVIATPGRLIDML-ESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDR 206
+ +IV+ATPGR+ID L S +L ++ L+LDEADR+L++GF +I+++V R
Sbjct: 270 RSRPDIVVATPGRMIDHLRNSMSVDLDDLSVLILDEADRLLELGFSAEIQELVRVCPKKR 329
Query: 207 QTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLL 266
QT+ +SAT +EV+ L + L P + L A+ K+ + E + ++ ++
Sbjct: 330 QTMLFSATMTEEVDDLIKLSLSKPLR-------LSADPLAKRPASLTEEVVRLRRMREVN 382
Query: 267 EDIM--------DGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF 318
++ + S+++IF TK+ ++ + G A +HG+ +QA+R L EF
Sbjct: 383 QEAVLLAMCSKTFTSKVIIFSGTKQAAHRLRIIFGLSGLKAAELHGNLTQAQRLGALEEF 442
Query: 319 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
+ + + ATDVAARGLD+ V+ VIN+ P L YVH
Sbjct: 443 RKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVH 482
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 172/331 (51%), Gaps = 10/331 (3%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F D +L + + GF P+PIQ + P+AL G D++ A+ G+GKT A+ +PA+
Sbjct: 151 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEK 210
Query: 89 VNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDL 147
+ D I V++L PTRELA+Q Q C + G +I+ GG + L
Sbjct: 211 I------DQDKNVIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRL 264
Query: 148 QKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQ 207
+ V +++ TPGR++D+ + L+ + LV+DEAD++L F P I +++ + +RQ
Sbjct: 265 YQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFKPSIEQLIQFLPSNRQ 324
Query: 208 TLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE 267
L +SAT+P V+ ++L PY II D I Q+ V E+QK L L
Sbjct: 325 ILLFSATFPVTVKDFNDRYLRKPY--IINLMDELTLKGITQFYAFVEERQKVHCLNTLFS 382
Query: 268 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 327
+ I IF ++ + + +++ G+ IH Q R+ V +F++G +
Sbjct: 383 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 441
Query: 328 ATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
TD+ RG+D++ V VIN+DFP + E Y+H
Sbjct: 442 CTDLFTRGIDIQAVNVVINFDFPKNSETYLH 472
>Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:23956977-23948909 | 20130731
Length = 557
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 184/340 (54%), Gaps = 12/340 (3%)
Query: 26 VKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPA 85
++F+ +G E + + F T IQ++ P L G+D++G A TGSGKTLA+L+PA
Sbjct: 89 TESFSSLGLSERTSQAIAAMSFTHMTQIQAKSIPPLLMGKDVLGAARTGSGKTLAFLIPA 148
Query: 86 I-VHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKF--GASSRIKSTCIYGGVPKGP 142
+ + N Q P +G V+V+ PTRELA+Q ++ G S+ I GGV +
Sbjct: 149 VELLYNVQ--FTPRNGTGVIVICPTRELAIQTHAVASELMKGYHSQTLGKVI-GGVGRKG 205
Query: 143 QVRDLQKGVEIVIATPGRLIDMLESHHTNL-RRVTYLVLDEADRMLDMGFDPQIRKIVSQ 201
+ + KGV ++IATPGRL+D L++ + + + L++DEADR+L+ F+ ++++I++
Sbjct: 206 EAERIVKGVNLLIATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILESNFEEEMKQILNI 265
Query: 202 IRPDRQTLYWSATWPKEVEQLARKFLYDP---YKVIIGSEDLKANHAIKQYVDIVPEKQK 258
+ RQT +SAT K+VE LAR P V IG E + + YV +VP ++
Sbjct: 266 LPKKRQTALFSATQTKKVEDLARLSFQTPPVYVDVDIGREKVTVEGLEQGYV-VVPCAKR 324
Query: 259 YDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF 318
+ L L+ ++++F + L+ G L+IHG + Q R F
Sbjct: 325 FVVLYSFLKR-YQSKKVMVFFSSCNSVKFHADLLKFIGLDCLNIHGKQKQNSRTSTFFNF 383
Query: 319 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
+ I+ TDVAARGLD+ V +++ +D P ++Y+H
Sbjct: 384 CKAEKGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIH 423
>Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40427970-40421694 | 20130731
Length = 747
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 178/320 (55%), Gaps = 9/320 (2%)
Query: 45 AGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVL 104
+ FV T IQ P AL GRD++G A+TGSGKTLA+++P + ++ + DG +
Sbjct: 93 SKFVSMTKIQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKLHRER-WGTEDGVGSI 151
Query: 105 VLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLID- 163
+++PTRELA QI G R + + GG ++ + I+I TPGRL+
Sbjct: 152 IISPTRELAGQIFGVLNAIGEHHRFSAGLLIGGGGDVAIEKECVNKLNILICTPGRLLQH 211
Query: 164 MLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLA 223
M E+ + + ++ LVLDEADR+LD GF ++ I+SQ+ RQT+ +SAT K V+ LA
Sbjct: 212 MDETPNFDCSQMQVLVLDEADRILDSGFKKEVNAIISQLPKRRQTMLFSATQTKSVQDLA 271
Query: 224 RKFLYDPYKVIIGSEDLKANHA-IKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTK 282
R L DP + + E + A +KQ V IVP QK D L ++ + S+ L+F+ +
Sbjct: 272 RLSLKDPEYISVHEESVTATPTLLKQTVMIVPLDQKLDMLWTFIKRHLQ-SKTLVFLSSC 330
Query: 283 KGCD---QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDV- 338
K ++ ++L G P +HG Q +R + SEF K ++ +TDVAARGLD
Sbjct: 331 KQVKFVFEVFKKLH-PGIPLKCLHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAARGLDFN 389
Query: 339 KDVKYVINYDFPGSLEDYVH 358
K V +V+ D P ++ Y+H
Sbjct: 390 KAVDWVVQVDCPENVASYIH 409
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 177/335 (52%), Gaps = 13/335 (3%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F D +L + +GF P+ +Q + P A+ G D+I A++G GKT ++L +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 89 VNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGAS-SRIKSTCIYGGVPKGPQVRD 146
+ DP G + LVL TRELA QI E +F +K YGGV +D
Sbjct: 108 I------DPVPGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVH-KD 160
Query: 147 LQKGV--EIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLD-MGFDPQIRKIVSQIR 203
L K +IV+ TPGR++ + + +L+ V + VLDE D+ML+ + ++ I
Sbjct: 161 LLKNECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTP 220
Query: 204 PDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLV 263
D+Q + +SAT KE+ + +KF+ DP ++ + E H + Q+ + E++K KL
Sbjct: 221 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLN 280
Query: 264 KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKS 323
LL D +D ++++IF+ + ++ R L +P++ IH SQ ER FK G S
Sbjct: 281 DLL-DALDFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHS 339
Query: 324 PIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
I+ ATD+ RG+D++ V VINYD P S + Y+H
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 177/335 (52%), Gaps = 13/335 (3%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F D +L + +GF P+ +Q + P A+ G D+I A++G GKT ++L +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 89 VNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGAS-SRIKSTCIYGGVPKGPQVRD 146
+ DP G + LVL TRELA QI E +F +K YGGV +D
Sbjct: 108 I------DPVPGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVH-KD 160
Query: 147 LQKGV--EIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLD-MGFDPQIRKIVSQIR 203
L K +IV+ TPGR++ + + +L+ V + VLDE D+ML+ + ++ I
Sbjct: 161 LLKNECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTP 220
Query: 204 PDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLV 263
D+Q + +SAT KE+ + +KF+ DP ++ + E H + Q+ + E++K KL
Sbjct: 221 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLN 280
Query: 264 KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKS 323
LL D +D ++++IF+ + ++ R L +P++ IH SQ ER FK G S
Sbjct: 281 DLL-DALDFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHS 339
Query: 324 PIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
I+ ATD+ RG+D++ V VINYD P S + Y+H
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
>Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348854-14341230 | 20130731
Length = 684
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 183/349 (52%), Gaps = 18/349 (5%)
Query: 26 VKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPA 85
V +F +G + V+ V++ G PT IQ G P L G+ ++ + TGSGKTLAYLLP
Sbjct: 108 VGSFEGLGLGDEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPL 167
Query: 86 IVHVNAQP-----ILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPK 140
+ + +L P P +VL PTREL+ Q+ + +R + T + GG
Sbjct: 168 VQLLRRDEQMNGLVLKP-KRPRAVVLCPTRELSEQVFRVAKAISHHARFRCTMVSGGGRL 226
Query: 141 GPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 200
PQ L +++V+ TPGR++ +E + + Y+VLDEAD M D GF P I+K ++
Sbjct: 227 RPQEESLSNPIDMVVGTPGRILQHIEEGNMVYGDIQYVVLDEADTMFDRGFGPDIKKFLA 286
Query: 201 QI-----RPDR---QTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDI 252
+ +PD QT+ +AT K V+ L + + S K ++A ++ +
Sbjct: 287 PLKHRASKPDSLGFQTVLVTATMTKAVQNLVDEEFQGIVHLRTSSLHKKISNARHDFIKL 346
Query: 253 VPEKQKYDKLVKLLE-DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAER 311
+ K D L+++LE + G+R+++F +T + L + ++ HG+ A+R
Sbjct: 347 SGTENKLDSLLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQR 406
Query: 312 DWVLSEFKSGK--SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
L++FKS P + TD+AARGLD+ DV +VI +DFP + DY+H
Sbjct: 407 VENLNKFKSNNDDCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLH 454
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 174/335 (51%), Gaps = 13/335 (3%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F D +L + +GF P+ +Q + P A+ G D+I A++G GKT ++L +
Sbjct: 125 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 184
Query: 89 VNAQPILDPGDGPIV-LVLAPTRELAVQIQQECTKFGAS-SRIKSTCIYGGVPKGPQVRD 146
+ DP G + LVL TRELA QI E +F IK YGGV +D
Sbjct: 185 I------DPVPGQVAALVLCHTRELAYQICHEVERFSTYLPDIKVAVFYGGVNIKVH-KD 237
Query: 147 LQKGV--EIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLD-MGFDPQIRKIVSQIR 203
L K IV+ TPGR++ + L+ V + +LDE D+ML+ + +++I
Sbjct: 238 LLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRKDVQEIFKLTP 297
Query: 204 PDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLV 263
D+Q + +SAT KE+ + +KF+ DP ++ + E H + Q+ + E +K KL
Sbjct: 298 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQEPEKNRKLN 357
Query: 264 KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKS 323
LL D +D ++++IF+ + ++ + L +P++ IH SQ ER FK GK
Sbjct: 358 DLL-DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQ 416
Query: 324 PIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
I+ ATD+ RG+D++ V VINYD P S + Y+H
Sbjct: 417 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 451
>Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10127066 | 20130731
Length = 573
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 178/343 (51%), Gaps = 13/343 (3%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F++ L+ VK AG+ + T +Q P+ L+G+D++ A+TG+GKT+A+LLP+I
Sbjct: 107 FDECSVSPLSLKGVKDAGYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLLPSIEV 166
Query: 89 VNAQPILDPGDG--PI-VLVLAPTRELAVQIQQECTKF-GASSRIKSTCIYGGVPKGPQV 144
V P DPG PI VLV+ PTRELA Q E TK I + + GG +
Sbjct: 167 VVKSPPSDPGQSQTPILVLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTKIVSEQ 226
Query: 145 RDLQKG-VEIVIATPGRLIDMLES---HHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 200
+ +QK +I++ATPGRL D + +NL + V+DEADR+LDMGF I +I++
Sbjct: 227 KRIQKNPCQILVATPGRLKDHIAKTAGFASNLMGLKTFVIDEADRLLDMGFRKDIEEIIT 286
Query: 201 QIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVI-IGSEDLKANHA-IKQYVDIVPEKQK 258
+ RQTL +SAT PK V Q+ L Y+ I E + H+ ++Q I P +
Sbjct: 287 SVPKQRQTLMFSATIPKAVHQVCNVALKKDYEFINTVQEGTEETHSQVRQMHLIAPLDKH 346
Query: 259 YDKL-VKLLEDIMD--GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVL 315
+ L V L E I D ++L+F T + L I+ K Q R+ V
Sbjct: 347 FSLLSVILKEHIADEVDYKVLVFCTTAMVTSLVASLLGKLDLNVREIYSRKKQGFRNRVS 406
Query: 316 SEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
EF+ K I+ +DV+ARG+D DV V+ P E Y+H
Sbjct: 407 DEFRKSKRLILVTSDVSARGVDYPDVSLVVQLGIPADKELYIH 449
>Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10113462-10118856 | 20130731
Length = 569
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 177/343 (51%), Gaps = 13/343 (3%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F+ L+ VK AG+ + T +Q P+ LKG+D++ A+TG+GKT+A+LLP+I
Sbjct: 103 FDKCSVSPLSLKGVKDAGYEKMTIVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEV 162
Query: 89 VNAQPILDPGDG--PI-VLVLAPTRELAVQIQQECTKF-GASSRIKSTCIYGGVPKGPQV 144
V P + G PI VLV+ PTRELA Q E TK I + + GG +
Sbjct: 163 VVKSPPNNRGQNQTPILVLVVCPTRELACQAAAEATKLLKYHPTIGAQVVIGGTSLSSEQ 222
Query: 145 RDLQKG-VEIVIATPGRLIDMLES---HHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 200
+ +QK +I+IATPGRL D + + + L V LVLDEAD++LDMGF I KI++
Sbjct: 223 KRIQKNPCQILIATPGRLKDHIANTAGFASKLMGVKALVLDEADQLLDMGFRKDIEKIIA 282
Query: 201 QIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVI-IGSEDLKANHA-IKQYVDIVPEKQK 258
+ RQTL +SAT P V Q+ L ++ I E + H+ ++Q I P +
Sbjct: 283 SVPKQRQTLMFSATIPDAVHQVCNVALKKDFEFINTVQEGTEETHSQVRQMHLIAPLDKH 342
Query: 259 YDKL-VKLLEDIMDGS--RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVL 315
+ L V L E I D ++L+F T + L IH K+Q+ R V
Sbjct: 343 FSLLSVILKEHIADDVDYKVLVFCTTAMVTSLVANLLGKLNLNVREIHSRKNQSYRTRVS 402
Query: 316 SEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
EF+ K I+ +DV+ARG+D DV V+ P + Y+H
Sbjct: 403 DEFRKSKRLILVTSDVSARGVDYPDVSLVVQVGLPADKQQYIH 445
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 176/335 (52%), Gaps = 13/335 (3%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F D +L + +GF P+ +Q + P A+ G D++ A++G GKT ++L +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSTLQQ 107
Query: 89 VNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGAS-SRIKSTCIYGGVPKGPQVRD 146
+ DP G + L+L TRELA QI E +F + +K YGGV +D
Sbjct: 108 I------DPVPGQVSALILCHTRELAYQICHEFERFSTYLADLKVAVFYGGVNIKVH-KD 160
Query: 147 LQKGV--EIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLD-MGFDPQIRKIVSQIR 203
L K IV+ TPGR++ + +L+ V + +LDE D+ML+ + ++ I
Sbjct: 161 LLKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTP 220
Query: 204 PDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLV 263
D+Q + +SAT KE+ + +KF+ DP ++ + E H + Q+ + E++K KL
Sbjct: 221 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLN 280
Query: 264 KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKS 323
LL D +D ++++IF+ + ++ + L +P++ IH SQ ER FK G +
Sbjct: 281 DLL-DALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHT 339
Query: 324 PIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
I+ ATD+ RG+D++ V VINYD P S + Y+H
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
>Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25903244-25908935 | 20130731
Length = 752
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 174/320 (54%), Gaps = 8/320 (2%)
Query: 44 KAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIV 103
++ FV T IQ P AL GRD++G A+TGSGKTLA+++P + + + P DG
Sbjct: 92 RSKFVSMTDIQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKLYRKR-WGPEDGVGS 150
Query: 104 LVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLID 163
++++PT ELA QI G + + GG ++ + ++I TPGRL+
Sbjct: 151 IIISPTWELAGQIFAVLKAIGCIHGFSAGLLIGGRQGVATEKECVNKLNVLICTPGRLLQ 210
Query: 164 -MLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQL 222
M E+ + + ++ LVLDEADR+LD GF ++ I+SQ+ RQT+ +SAT K V+ L
Sbjct: 211 HMDETPNFDCSKMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTMLFSATQTKSVQDL 270
Query: 223 ARKFLYDPYKVIIGSEDLKANHA-IKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDT 281
AR L DP + + E + A +KQ V IVP QK D L ++ + S+ L+F+ +
Sbjct: 271 ARLSLKDPEYISVHEESVTATPTLLKQKVMIVPLDQKLDMLWNFIKTHLK-SKTLVFLSS 329
Query: 282 KKGCDQITRQLR--MDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDV- 338
K + + G P +HG Q +R + SEF K I+ ATDVAARGLD
Sbjct: 330 CKQVKFVFEAFKKLHPGIPLKCLHGRMKQEKRMAIYSEF-CEKCSILFATDVAARGLDFN 388
Query: 339 KDVKYVINYDFPGSLEDYVH 358
+ V +V+ D P ++ Y+H
Sbjct: 389 RAVDWVVQVDCPENVASYIH 408
>Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46109502-46117199 | 20130731
Length = 583
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 176/326 (53%), Gaps = 23/326 (7%)
Query: 46 GFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLV 105
GF T IQ++ P L G+D++G A TGSGKTLA+L+PA V + + + G V++
Sbjct: 115 GFQHLTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLIPA-VELLHKLKFNQRSGTGVVI 173
Query: 106 LAPTRELAVQIQQECTKFGASSRIKST--CIYGGVPKGPQVRDLQKGVEIVIATPGRLID 163
+ PTRELA+Q + K R T + GG + + L KG+ IV+ATPGRL+D
Sbjct: 174 ICPTRELAIQTHEVAQKLLKHHRHSQTLGLVIGGSARRTEAESLAKGINIVVATPGRLLD 233
Query: 164 MLESHHTNLRRVTY-----LVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKE 218
L+ N +R Y L++DEADR+L+ F+ ++++I+ + +RQT +SAT K+
Sbjct: 234 HLQ----NTKRFIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKNRQTALFSATQTKK 289
Query: 219 VEQLAR-KFLYDPYKVII--GSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRI 275
VE LAR F P + + G + + ++ YV +VP +++ L L+ ++
Sbjct: 290 VEDLARLSFQTTPIYIDVDDGRKKVTNEGLLQGYV-VVPCAKRFMVLYSFLKR-HKSKKV 347
Query: 276 LIFMDTKKGCDQITRQLRMDGWPAL---SIHGDKSQAERDWVLSEFKSGKSPIMTATDVA 332
++F + C+ + + L SI+G + Q R +F + I+ TDVA
Sbjct: 348 MVFFSS---CNSVKFHADIFNHIHLHCSSIYGKQKQQTRTTTFVDFCQAEKGILLCTDVA 404
Query: 333 ARGLDVKDVKYVINYDFPGSLEDYVH 358
ARGLD+ V +++ YD P ++Y+H
Sbjct: 405 ARGLDIPSVDWILQYDPPDEPKEYIH 430
>Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:21899223-21892509 | 20130731
Length = 613
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 202/411 (49%), Gaps = 87/411 (21%)
Query: 28 TFNDVGFPEYVLEEVK-KAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 86
+F+ +G + + ++++ + GF PT IQ+Q P+ L GR + A TG+GKT+AYL P I
Sbjct: 44 SFSSLGLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPII 103
Query: 87 VHVNA-QPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSR-IKSTCIYGGVPKGPQV 144
H+ + + DG LVL PTREL +Q+ + K I I GG + +
Sbjct: 104 HHLQSYDKRVQRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKEK 163
Query: 145 RDLQKGVEIVIATPGRLIDMLESH----HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 200
L+KG+ I+IATPGRL+D L++ +TNLR +++ DEADR+L++GF +I++I++
Sbjct: 164 ARLRKGISILIATPGRLLDHLKNTSSFVYTNLR---WIIFDEADRILELGFGKEIQEILN 220
Query: 201 QI---------------RPD---RQTLYWSATWPKEVEQLARKFLYDPYKVIIG------ 236
+ RP RQ L SAT ++V LA+ L DP V+IG
Sbjct: 221 LLGSMKTGHDDQESGVPRPSKFQRQNLLLSATLNEKVNHLAKISLEDP--VMIGIDDKIM 278
Query: 237 -------------SEDLKANH-----AIKQYVDIVPEK--QKYDK---------LVKLLE 267
ED + H AI Y VPE+ Q+Y K L+ +L+
Sbjct: 279 EPTSRIRFDNSDCDEDNEDTHSSKIPAIGAYK--VPEQLIQRYMKVPCGSRLAILLSILK 336
Query: 268 DIMD---GSRILIFMDTKKGCD---QITRQLRMDGWP--------------ALSIHGDKS 307
+ + ++++F T D + + +P L +HG+
Sbjct: 337 HLFEREPSQKVVLFFSTCDAVDFHYSLITEFLFSSYPQTEEGNRTMFLGCKTLRLHGNME 396
Query: 308 QAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
Q +R FK+ KS ++ +TDV+ARGLD +V+ +I YD PG +YVH
Sbjct: 397 QEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVH 447
>Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10111776-10105760 | 20130731
Length = 668
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 176/348 (50%), Gaps = 23/348 (6%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F+ L+ +K AG+ + T +Q P+ LKG+D++ A+TG+GKT+A+LLP+I
Sbjct: 202 FDQCSVSPLSLKGIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEV 261
Query: 89 VNAQPILDPGDG-----PI-VLVLAPTRELAVQIQQECTKF-GASSRIKSTCIYGGVPKG 141
V P P D PI VLV+ PTRELA Q E TK I + GG
Sbjct: 262 VVKSP---PSDRDQRRPPIFVLVICPTRELACQAAAEATKLLKYHPTIGVQVVIGGTRLA 318
Query: 142 PQVRDLQKG-VEIVIATPGRLIDMLES---HHTNLRRVTYLVLDEADRMLDMGFDPQIRK 197
+ + +Q +I++ATPGRL D +E+ + L V LVLDEAD +LDMGF I K
Sbjct: 319 LEQKRMQANPCQILVATPGRLRDHIENTAGFASRLMGVKSLVLDEADHLLDMGFRKDIEK 378
Query: 198 IVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVII----GSEDLKANHAIKQYVDIV 253
I++ I RQTL +SAT P EV Q+ L ++ I GSED + ++Q +
Sbjct: 379 IIAAIPKQRQTLMFSATIPDEVRQVCHVALKRDFEYINTVQEGSED--THSQVRQMHLVA 436
Query: 254 PEKQKYDKLVKLL-EDIMDGS--RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAE 310
P + + L +L E I D ++L+F T + L IH K Q+
Sbjct: 437 PLDKHFPLLYAILKEHIADDVDYKVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQSY 496
Query: 311 RDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
R V EF+ K I+ +DV+ARG+D DV V+ P + Y+H
Sbjct: 497 RTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVVQVGLPADKQQYIH 544
>Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890321-18881902 | 20130731
Length = 610
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 194/407 (47%), Gaps = 79/407 (19%)
Query: 28 TFNDVGFPEYVLEEVK-KAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 86
+F+ +G + + ++++ + GF PT +Q+Q P+ L GR + A TG+GKT+AYL P I
Sbjct: 41 SFSSLGLHQTLCDQLRERMGFEGPTLVQAQAIPVVLSGRHALVNAATGTGKTIAYLAPII 100
Query: 87 VHVNA-QPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSR-IKSTCIYGGVPKGPQV 144
H+ + + DG LVL PTREL +Q+ + K I I GG + +
Sbjct: 101 HHLQSYDKRIQRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKEK 160
Query: 145 RDLQKGVEIVIATPGRLIDMLESH----HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 200
L+KG+ I+IATPGRL+D L++ +TNLR +++ DEADR+L++GF +I++I++
Sbjct: 161 ARLRKGISILIATPGRLLDHLKNTSSFVYTNLR---WIIFDEADRILELGFGKEIQEILN 217
Query: 201 QI---------------RP---DRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKA 242
+ RP RQ L SAT ++V LA+ L DP + I + L+
Sbjct: 218 LLGSMKTGHDDQGNGVPRPTKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKVLEP 277
Query: 243 NHAIK------------QYVDIVPEKQKY---DKLVKLLEDIMDGSRILIFMDTKK---- 283
I+ Y +P Y ++L++ + GSR+ I + K
Sbjct: 278 TSKIRFDNSDCDEDNEGTYSSKIPAVGAYKVPEQLIQRYMKVPCGSRLAILLSILKHLFE 337
Query: 284 ------------GCDQITRQLRM--------------------DGWPALSIHGDKSQAER 311
CD + + G L +HG+ Q +R
Sbjct: 338 REPSQKIVLFFSTCDAVDFHYSLLTEFLFSAFPQTEEGNRPMFLGCKTLRLHGNMEQEDR 397
Query: 312 DWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
FK+ KS ++ +TDV+ARGLD +V+ +I YD PG +YVH
Sbjct: 398 TTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVH 444
>Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10126329 | 20130731
Length = 458
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/334 (35%), Positives = 174/334 (52%), Gaps = 13/334 (3%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F++ L+ VK AG+ + T +Q P+ L+G+D++ A+TG+GKT+A+LLP+I
Sbjct: 107 FDECSVSPLSLKGVKDAGYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLLPSIEV 166
Query: 89 VNAQPILDPGDG--PI-VLVLAPTRELAVQIQQECTKF-GASSRIKSTCIYGGVPKGPQV 144
V P DPG PI VLV+ PTRELA Q E TK I + + GG +
Sbjct: 167 VVKSPPSDPGQSQTPILVLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTKIVSEQ 226
Query: 145 RDLQKG-VEIVIATPGRLIDMLES---HHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 200
+ +QK +I++ATPGRL D + +NL + V+DEADR+LDMGF I +I++
Sbjct: 227 KRIQKNPCQILVATPGRLKDHIAKTAGFASNLMGLKTFVIDEADRLLDMGFRKDIEEIIT 286
Query: 201 QIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVI-IGSEDLKANHA-IKQYVDIVPEKQK 258
+ RQTL +SAT PK V Q+ L Y+ I E + H+ ++Q I P +
Sbjct: 287 SVPKQRQTLMFSATIPKAVHQVCNVALKKDYEFINTVQEGTEETHSQVRQMHLIAPLDKH 346
Query: 259 YDKL-VKLLEDIMD--GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVL 315
+ L V L E I D ++L+F T + L I+ K Q R+ V
Sbjct: 347 FSLLSVILKEHIADEVDYKVLVFCTTAMVTSLVASLLGKLDLNVREIYSRKKQGFRNRVS 406
Query: 316 SEFKSGKSPIMTATDVAARGLDVKDVKYVINYDF 349
EF+ K I+ +DV+ARG+D DV V+ +
Sbjct: 407 DEFRKSKRLILVTSDVSARGVDYPDVSLVVQVKY 440
>Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:32167186-32161537 | 20130731
Length = 589
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 189/358 (52%), Gaps = 34/358 (9%)
Query: 29 FNDVGFP--EYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 86
F+D+ P E VL+ + + F TP+Q+ P+ +D+ A TGSGKTLA+++P +
Sbjct: 15 FSDLKPPLSEPVLQALTDSNFDFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVIP-L 73
Query: 87 VHVNAQPILDPGDGPIV-LVLAPTRELAVQIQQECTKFGAS-SRIKSTCIYGGVPKGPQV 144
V + + +P ++ ++++PTRELA QI F ++ + +KS + GGV +
Sbjct: 74 VEILRRNASNPKPHQVLGVIISPTRELASQIYHVAQPFISTLANVKSMLLVGGVEVKADI 133
Query: 145 RDLQK-GVEIVIATPGRLIDMLESHHT-NLRRVTYLVLDEADRMLDMGFDPQIRKIVSQI 202
+ +++ G ++I TPGRL D++ + + L+LDEADR+LDMGF QI I++++
Sbjct: 134 KKIEEEGANVLIGTPGRLHDIMNRMDILDFKSFEILILDEADRLLDMGFQKQINAIITEL 193
Query: 203 RPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIK--------------- 247
R+T +SAT + VE+LA+ L +P +V + +E AN +
Sbjct: 194 PKLRRTGLFSATQTQAVEELAKAGLRNPVRVEVRAETKTANDSASSKKIESSKTPSGLQI 253
Query: 248 QYVDIVPEK---QKYDKLVKLLEDIMDGSRILIFMDTKKGCDQ----ITRQLRMDGWPAL 300
+Y++ +K Q D LVK +I+I+ T D + R + G+ +
Sbjct: 254 EYLECEADKKPSQLVDFLVK-----NRSKKIIIYFMTCACVDYWGLVLPRLSVLKGFSLI 308
Query: 301 SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
S+HG Q+ R+ L+ F S + I+ TDVAARGLD+ V ++ YD P +VH
Sbjct: 309 SLHGKMKQSVREKALTSFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFVH 366
>Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:26668487-26670676 | 20130731
Length = 552
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 181/401 (45%), Gaps = 59/401 (14%)
Query: 12 RREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIA 71
R+EI + P K+F+++G PE ++E + K GF PT +QS P LK RD+I +
Sbjct: 97 RKEI----ENAPFAAKSFSELGIPEVLIERLGKEGFNVPTDVQSAAVPTILKNRDVIIQS 152
Query: 72 ETGSGKTLAYLLPAIVHVN-----------AQPILDPGDGPIVLVLAPTRELAVQIQQEC 120
TGSGKTLAYLLP + + G +++AP+REL +QI +E
Sbjct: 153 YTGSGKTLAYLLPILSVIGPLKGENNEGGGDGGESGKKLGVEAVIVAPSRELGMQIVREF 212
Query: 121 TK-FGASSRIKSTCIYGGVPKGPQVRDLQKGV-EIVIATPGRLIDMLESHHTNLRRVTYL 178
K G +R + GG + Q L+K IV+ TPGR+ ++ S YL
Sbjct: 213 EKILGMENRKVVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSASGKLRAHGCQYL 272
Query: 179 VLDEADRMLDMGFDPQIRKIVSQI-------------RPDRQTLYWSATWPKEVEQLARK 225
VLDE D +L F + +++ + + +RQ + SAT P V + A+
Sbjct: 273 VLDEVDELLSFNFREDMHRLLEHVGRRSGADHNSKAKKTERQLIMVSATVPFSVVRAAKS 332
Query: 226 FLYDPY----KVIIGSEDLKAN------------------------HAIKQYVDIVPEKQ 257
+ DP K I+ E L A+K Y +V +
Sbjct: 333 WGSDPLLVQAKKIVPLETLSPEPVKLSPSSSSTPSVPSKAVVESLPPALKHYYCVVRLQH 392
Query: 258 KYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSE 317
K D L + + +D +++FM+ K + +L G A +HGD + R L +
Sbjct: 393 KVDTLRRCIHA-LDAKFVIVFMNHTKQLKDVVFKLEARGVKAAELHGDLGKLGRSTTLKK 451
Query: 318 FKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
FK+G+ ++ +++ARGLDV + V+N D P Y H
Sbjct: 452 FKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAH 492
>Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC |
scaffold0915:3555-1057 | 20130731
Length = 282
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 148/289 (51%), Gaps = 10/289 (3%)
Query: 42 VKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGP 101
+ + GF P+PIQ + P+AL G D++ A+ G+GKT A+ +PA+ + D +
Sbjct: 3 IYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKI------DQDNNI 56
Query: 102 I-VLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGR 160
I V++L PTRELA+Q Q C + G +I+ GG + L + V +++ TPGR
Sbjct: 57 IQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGR 116
Query: 161 LIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE 220
++D+ + L+ + LV+DEAD++L F P I +++ + P RQ L +SAT+P V+
Sbjct: 117 ILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPTRQILMFSATFPVTVK 176
Query: 221 QLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMD 280
++L PY II D I Q+ V E+QK L L + I IF +
Sbjct: 177 DFNDRYLRKPY--IINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI-IFCN 233
Query: 281 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTAT 329
+ + + +++ G+ IH Q R+ V +F++G + T
Sbjct: 234 SVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 282
>Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:40729630-40725252 | 20130731
Length = 756
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 170/343 (49%), Gaps = 13/343 (3%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F++ ++ + +G+ T +Q P+ L+G D++ A+TG+GKT A+LLPAI
Sbjct: 289 FDECAISPLTIKALSTSGYTHMTRVQETSLPICLEGNDVMVKAKTGTGKTAAFLLPAIET 348
Query: 89 V-NAQPILDPGDGP--IVLVLAPTRELAVQIQQEC-TKFGASSRIKSTCIYGGVP-KGPQ 143
V A P VL+L PTRELA QI E + + GGV K Q
Sbjct: 349 VLKAMSSKTSHRAPPIYVLILCPTRELASQIAAEAKVLLKYHDGVGVQTLVGGVRFKVDQ 408
Query: 144 VRDLQKGVEIVIATPGRLIDMLESHHTNLRRVT---YLVLDEADRMLDMGFDPQIRKIVS 200
R ++++ATPGRL+D +E+ RV L+LDEAD +LD+GF I KIV
Sbjct: 409 KRLESDPCQMLVATPGRLLDHIENKTGISVRVMGLQMLILDEADHLLDLGFRKDIEKIVD 468
Query: 201 QIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVI--IGSEDLKANHAIKQYVDIVPEKQK 258
+ RQ+L +SAT PKEV ++++ L +K + +G ++ +KQ I P +
Sbjct: 469 CLPRQRQSLLFSATIPKEVRRVSQLVLKREHKYVDTVGMGCVETPVQVKQSYLIAPHESH 528
Query: 259 YDKLVKLLEDIMDGS---RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVL 315
+ + +L++ + + ++++F T LR IH K Q R V
Sbjct: 529 FQIVHHILKEHISQTPDYKVIVFCITGMVTSLTYHLLRDMKLNVREIHSRKPQLYRTRVS 588
Query: 316 SEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
EFK K I+ ++DV +RG++ DV VI P E Y+H
Sbjct: 589 DEFKESKQMILVSSDVTSRGMNYPDVTLVIQVGIPSDREQYIH 631
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 190/399 (47%), Gaps = 70/399 (17%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMAL-KGRDLIGIAETGSGKTLAYLLP--- 84
+N++ +++ + K GF EPTPIQ P A +G+D+IG AETGSGKTLA+ LP
Sbjct: 164 WNELRLHPRLMKAIHKLGFKEPTPIQKACVPAAAHQGKDVIGAAETGSGKTLAFGLPILQ 223
Query: 85 ----------AIVHVNAQPILD--PGDGPI-VLVLAPTRELAVQIQQECTKFGASSRIKS 131
+I VN + + G + L++APTRELA+Q+ + ++
Sbjct: 224 RLLEEREKAESISGVNGEEAAEKYATTGLLRSLIIAPTRELALQVAKHLKAVAKHINVRV 283
Query: 132 TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML---ESHHTNLRRVTYLVLDEADRMLD 188
T I GG+ Q R L+ EIV+ATPGRL +++ E H L +++ VLDEADRM+
Sbjct: 284 TAIVGGILPEKQERLLKARPEIVVATPGRLWELMSSGEKHLIELHSLSFFVLDEADRMVQ 343
Query: 189 MGFDPQIRKIVSQI------------------------RPDRQTLYWSAT------WPKE 218
G +++ I+ + + RQTL +SAT + K+
Sbjct: 344 SGHFKELQSIIDMLPMSNISSEDNSKDAQNCVTVSSIQKKKRQTLVFSATVALSADFRKK 403
Query: 219 VEQ--LARKFL----YDPYKVIIGSEDLKANHAIKQYVD--IVPEKQKYDKLVKLLEDIM 270
+++ + +K L D + + ++ N AI + I+ K + + ++ ED
Sbjct: 404 LKRGSIQKKQLSTDGLDSIETLSERAGMRPNAAIIDLTNPSILAAKIE-ESFIECTEDDK 462
Query: 271 DGS-----------RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK 319
D R ++F + I+ LR+ G ++H Q R + F+
Sbjct: 463 DAHLYYILTVHGQGRTIVFCTSIAALRHISSILRILGVNVWTLHAQMQQRARLKAMDRFR 522
Query: 320 SGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
+ I+ ATDVAARGLD+ V+ V++Y P S E YVH
Sbjct: 523 ENDNGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVH 561
>Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:55283621-55286718 | 20130731
Length = 537
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 174/360 (48%), Gaps = 30/360 (8%)
Query: 26 VKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPA 85
+K+F +G ++++E + P+ IQ+ +P + G+ I ++GSGKTLAYL+P
Sbjct: 130 LKSFKGIGCADFMIESLHNLSLTRPSNIQAMSFPPVIAGKSCIIADQSGSGKTLAYLVPI 189
Query: 86 IVHVNAQPIL----DPGDGPIVLVLAPTRELAVQIQQECTKFGASSRI--KSTCIYGGVP 139
I + Q + P +L+LAPT ELA Q+ C S + KS + GG
Sbjct: 190 IQRLRQQELQGLHKSSSQSPTLLILAPTAELASQVFHNCRSISKSGVVPFKSMLVTGGFR 249
Query: 140 KGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRML-DMGFDPQIRKI 198
+ Q+ L +GV+++IATPGR + ++ +L +T VLDE D + D F+ ++ +
Sbjct: 250 QKTQLDTLNQGVDVLIATPGRFLFLINQGFLHLTNLTCAVLDEVDILFGDEDFEKALQCL 309
Query: 199 VSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQ-YVDIVPEKQ 257
+S D Q L+ +AT PK V + D ++++G + N +++ VD E
Sbjct: 310 ISSSPVDTQYLFVTATLPKNVYSKLVEVFPD-CEMVMGPSMHRINSRLEEIIVDCSGEDG 368
Query: 258 K--------YDKLVKLLEDIMDGSRI---LIFMDTKKGCDQITRQL-RMD----GWPALS 301
+ +K LL+ + + +R+ ++F + + C ++ L R D L
Sbjct: 369 QEKTLDTAFLNKKAALLQ-LAEKNRVPRTIVFCNKIETCRKVENALNRFDRKGIRMQVLP 427
Query: 302 IHGDKSQAERDWVLSEFKSGK----SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
H +Q R + EF S M TD A+RG+D V +VI +D+P +YV
Sbjct: 428 FHAAMTQESRLASMKEFTRSPPKELSQFMVCTDRASRGIDFTRVDHVILFDYPRDPSEYV 487
>Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:27069344-27076281 | 20130731
Length = 491
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 163/327 (49%), Gaps = 40/327 (12%)
Query: 47 FVEPTPIQSQGWPMALK--GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPG-DGPIV 103
F +P+ IQ++ PM L RDLI A GSGKT + L + V DP P
Sbjct: 100 FEKPSKIQAKSLPMILNPPHRDLIAQAHNGSGKTTCFNLGMLSRV------DPNLQAPQA 153
Query: 104 LVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKG-----PQVRDLQKGVEIVIATP 158
L + PTRELA+Q + K G + I S C VP P ++ ++VI TP
Sbjct: 154 LCICPTRELAIQNIEVLRKMGKYTGISSEC---AVPMDRRDSIPVMKRAPIMAQVVIGTP 210
Query: 159 GRLIDMLESHHTNLRRVTYLVLDEADRML-DMGF-DPQIRKI--VSQIRPDRQTLYWSAT 214
G + +++ + ++ LV DEAD+ML + GF D +R I + + Q L +SAT
Sbjct: 211 GTMKNLITYKKLGVTKLKILVFDEADQMLAEDGFRDDSLRIIKEIEKFNSSCQVLLFSAT 270
Query: 215 WPKEVEQLARKFL--YDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDG 272
+ + V+ A + + + ++ + E+L + A+KQY +VP D+LVK+ D++
Sbjct: 271 FNETVKNFATRVVGKKEHNELFVKKEELSLD-AVKQYKVLVP-----DELVKI--DVIKN 322
Query: 273 ---------SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKS 323
+ +IF+ T+ + + L G+ SI G +RD ++ EFK G +
Sbjct: 323 YIFELGENVGQTIIFVRTRNSAKMLHKALVDLGYEVTSIQGALDHVDRDKIVKEFKDGLT 382
Query: 324 PIMTATDVAARGLDVKDVKYVINYDFP 350
++ +TDV ARG D + V VINYD P
Sbjct: 383 QVLISTDVLARGFDQQQVNLVINYDLP 409
>Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348848-14341230 | 20130731
Length = 508
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 142/269 (52%), Gaps = 12/269 (4%)
Query: 101 PIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGR 160
P +VL PTREL+ Q+ + +R + T + GG PQ L +++V+ TPGR
Sbjct: 11 PRAVVLCPTRELSEQVFRVAKAISHHARFRCTMVSGGGRLRPQEESLSNPIDMVVGTPGR 70
Query: 161 LIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQI-----RPDR---QTLYWS 212
++ +E + + Y+VLDEAD M D GF P I+K ++ + +PD QT+ +
Sbjct: 71 ILQHIEEGNMVYGDIQYVVLDEADTMFDRGFGPDIKKFLAPLKHRASKPDSLGFQTVLVT 130
Query: 213 ATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE-DIMD 271
AT K V+ L + + S K ++A ++ + + K D L+++LE +
Sbjct: 131 ATMTKAVQNLVDEEFQGIVHLRTSSLHKKISNARHDFIKLSGTENKLDSLLQVLEPSLAK 190
Query: 272 GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGK--SPIMTAT 329
G+R+++F +T + L + ++ HG+ A+R L++FKS P + T
Sbjct: 191 GNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQRVENLNKFKSNNDDCPTLVCT 250
Query: 330 DVAARGLDVKDVKYVINYDFPGSLEDYVH 358
D+AARGLD+ DV +VI +DFP + DY+H
Sbjct: 251 DLAARGLDL-DVDHVIMFDFPLNSIDYLH 278
>Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 173/339 (51%), Gaps = 13/339 (3%)
Query: 26 VKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRD-LIGIAETGSGKTLAYLLP 84
+K+F D+G ++E +K + P IQ++ P+AL+G+D +IGI+ SGK A++LP
Sbjct: 1 MKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLP 60
Query: 85 AIVHVNAQPILDPG---DGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKG 141
+ Q +L+ G + VL+P+R+L +I + G+ +K +
Sbjct: 61 IL-----QALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDII 115
Query: 142 PQVRDLQKGVEIVIATPGRLIDMLE-SHHTNLRRVTYLVLDEADRMLDMGFDPQ-IRKIV 199
Q + + +++ T ++ L + +L R+ YLV+ EAD +L+ F+ Q + I+
Sbjct: 116 DQTNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDIL 175
Query: 200 SQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKY 259
S I +R+T +S+T ++V + R L +P K+ + S+ ++Q +P K
Sbjct: 176 SIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSC-FMPAMLKD 234
Query: 260 DKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK 319
LV +L + M G + +F T + L+ + A+ I SQA++ L+ FK
Sbjct: 235 CYLVYILTE-MTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFK 293
Query: 320 SGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
SGK I+ ++ A RGLD+ V VINY+ P DY+H
Sbjct: 294 SGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMH 332
>Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382212-29375908 | 20130731
Length = 417
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 173/339 (51%), Gaps = 13/339 (3%)
Query: 26 VKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRD-LIGIAETGSGKTLAYLLP 84
+K+F D+G ++E +K + P IQ++ P+AL+G+D +IGI+ SGK A++LP
Sbjct: 1 MKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLP 60
Query: 85 AIVHVNAQPILDPG---DGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKG 141
+ Q +L+ G + VL+P+R+L +I + G+ +K +
Sbjct: 61 IL-----QALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDII 115
Query: 142 PQVRDLQKGVEIVIATPGRLIDMLE-SHHTNLRRVTYLVLDEADRMLDMGFDPQ-IRKIV 199
Q + + +++ T ++ L + +L R+ YLV+ EAD +L+ F+ Q + I+
Sbjct: 116 DQTNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDIL 175
Query: 200 SQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKY 259
S I +R+T +S+T ++V + R L +P K+ + S+ ++Q +P K
Sbjct: 176 SIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSC-FMPAMLKD 234
Query: 260 DKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK 319
LV +L + M G + +F T + L+ + A+ I SQA++ L+ FK
Sbjct: 235 CYLVYILTE-MTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFK 293
Query: 320 SGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
SGK I+ ++ A RGLD+ V VINY+ P DY+H
Sbjct: 294 SGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMH 332
>Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 173/339 (51%), Gaps = 13/339 (3%)
Query: 26 VKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRD-LIGIAETGSGKTLAYLLP 84
+K+F D+G ++E +K + P IQ++ P+AL+G+D +IGI+ SGK A++LP
Sbjct: 1 MKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLP 60
Query: 85 AIVHVNAQPILDPG---DGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKG 141
+ Q +L+ G + VL+P+R+L +I + G+ +K +
Sbjct: 61 IL-----QALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDII 115
Query: 142 PQVRDLQKGVEIVIATPGRLIDMLE-SHHTNLRRVTYLVLDEADRMLDMGFDPQ-IRKIV 199
Q + + +++ T ++ L + +L R+ YLV+ EAD +L+ F+ Q + I+
Sbjct: 116 DQTNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDIL 175
Query: 200 SQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKY 259
S I +R+T +S+T ++V + R L +P K+ + S+ ++Q +P K
Sbjct: 176 SIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSC-FMPAMLKD 234
Query: 260 DKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK 319
LV +L + M G + +F T + L+ + A+ I SQA++ L+ FK
Sbjct: 235 CYLVYILTE-MTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFK 293
Query: 320 SGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
SGK I+ ++ A RGLD+ V VINY+ P DY+H
Sbjct: 294 SGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMH 332
>Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 173/339 (51%), Gaps = 13/339 (3%)
Query: 26 VKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRD-LIGIAETGSGKTLAYLLP 84
+K+F D+G ++E +K + P IQ++ P+AL+G+D +IGI+ SGK A++LP
Sbjct: 5 MKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLP 64
Query: 85 AIVHVNAQPILDPG---DGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKG 141
+ Q +L+ G + VL+P+R+L +I + G+ +K +
Sbjct: 65 IL-----QALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDII 119
Query: 142 PQVRDLQKGVEIVIATPGRLIDMLE-SHHTNLRRVTYLVLDEADRMLDMGFDPQ-IRKIV 199
Q + + +++ T ++ L + +L R+ YLV+ EAD +L+ F+ Q + I+
Sbjct: 120 DQTNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDIL 179
Query: 200 SQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKY 259
S I +R+T +S+T ++V + R L +P K+ + S+ ++Q +P K
Sbjct: 180 SIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSC-FMPAMLKD 238
Query: 260 DKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK 319
LV +L + M G + +F T + L+ + A+ I SQA++ L+ FK
Sbjct: 239 CYLVYILTE-MTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFK 297
Query: 320 SGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
SGK I+ ++ A RGLD+ V VINY+ P DY+H
Sbjct: 298 SGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMH 336
>Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 173/339 (51%), Gaps = 13/339 (3%)
Query: 26 VKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRD-LIGIAETGSGKTLAYLLP 84
+K+F D+G ++E +K + P IQ++ P+AL+G+D +IGI+ SGK A++LP
Sbjct: 5 MKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLP 64
Query: 85 AIVHVNAQPILDPG---DGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKG 141
+ Q +L+ G + VL+P+R+L +I + G+ +K +
Sbjct: 65 IL-----QALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDII 119
Query: 142 PQVRDLQKGVEIVIATPGRLIDMLE-SHHTNLRRVTYLVLDEADRMLDMGFDPQ-IRKIV 199
Q + + +++ T ++ L + +L R+ YLV+ EAD +L+ F+ Q + I+
Sbjct: 120 DQTNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDIL 179
Query: 200 SQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKY 259
S I +R+T +S+T ++V + R L +P K+ + S+ ++Q +P K
Sbjct: 180 SIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSC-FMPAMLKD 238
Query: 260 DKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK 319
LV +L + M G + +F T + L+ + A+ I SQA++ L+ FK
Sbjct: 239 CYLVYILTE-MTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFK 297
Query: 320 SGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
SGK I+ ++ A RGLD+ V VINY+ P DY+H
Sbjct: 298 SGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMH 336
>Medtr4g077370.1 | DEAD-box helicase family protein | LC |
chr4:29630577-29632466 | 20130731
Length = 446
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 112/199 (56%), Gaps = 8/199 (4%)
Query: 28 TFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 87
+F+D+G E+++ K G P P+Q P L+GR +IGI +TGSGKT A+ LP +
Sbjct: 250 SFSDLGLSEWMVRGCDKLGMQSPRPVQRHCIPKVLEGRHVIGIDKTGSGKTAAFALPILQ 309
Query: 88 HVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDL 147
+ P G LVL PTRELAVQ+ + G+S R+ T + GG+ K Q + L
Sbjct: 310 RLGETPF-----GVFALVLTPTRELAVQLAHQFWILGSSLRLILTVVVGGLDKRIQAKQL 364
Query: 148 QKGVEIVIATPGRLIDMLESH---HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRP 204
+VIATP RL +L+ + +LVLDEAD++LD+GF +++ I +
Sbjct: 365 VARPNLVIATPERLKILLQDNPEIAPIFAATKFLVLDEADQLLDVGFQEELKVIFQCLPE 424
Query: 205 DRQTLYWSATWPKEVEQLA 223
+RQ L++SAT ++++
Sbjct: 425 NRQNLFFSATMTSNLQKMC 443
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 109/209 (52%), Gaps = 29/209 (13%)
Query: 28 TFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 87
+F+D+G E+ ++ KK G P +Q P L+GRD++GI ETGSGKT A+ LP +
Sbjct: 2 SFSDLGLSEWTVQNCKKLGMQTPRRVQQHCIPKVLEGRDVVGIDETGSGKTAAFALPILQ 61
Query: 88 HVNAQPILDP-GDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRD 146
+ P P G LVL PTRELA+Q+ + G+S +P P
Sbjct: 62 RLAEHP--KPFGVYVFALVLTPTRELAIQLADQFLALGSSL----------LPTSPH--- 106
Query: 147 LQKGVEIVIATPGRLIDMLESH---HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIR 203
+VIATP RL +L + T +LVLDEAD++LD+GF ++ IV +
Sbjct: 107 ------LVIATPERLRVLLLDNPEIATIFATTKFLVLDEADQLLDVGFRDELNVIVQCLP 160
Query: 204 PDRQTLYWSATWPKEVEQLARKFLYDPYK 232
+RQ L++S T + +K +YD Y+
Sbjct: 161 ENRQNLFFSETMTSNL----KKMMYDRYR 185
>Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:17617607-17621556 | 20130731
Length = 450
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 156/334 (46%), Gaps = 27/334 (8%)
Query: 28 TFNDVGF-PEYVLEEVKKAGFVEPTPIQSQGWPMALK--GRDLIGIAETGSGKTLAYLLP 84
TF ++ PE + + GF++P+ IQ PM L +DLI A GSGKT ++L
Sbjct: 55 TFEELSLSPELLKGLYVEMGFIKPSKIQEITLPMILNPPHKDLIAQARNGSGKTTCFVLG 114
Query: 85 AIVHVNAQPILDPG-DGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQ 143
+ V DP P L + PTRELA+Q + K G + I S + K P
Sbjct: 115 MLSRV------DPNMKAPQALCICPTRELAIQNNEVLQKMGKYTGISSELAIPSMDKIPP 168
Query: 144 VRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIR 203
R ++VI TPG + + + R+ LV DEAD+ML + + Q+
Sbjct: 169 SRRPPIMAQVVIGTPGTINSLKNHKKLGVTRLKILVFDEADQMLAQMMVTKDWLVFLQV- 227
Query: 204 PDRQTLYWSATWPKEVEQLARKFLY--DPYKVIIGSEDLKANHAIKQY-VDIVPEKQKY- 259
L +SAT+ V+ A + + + + + E+L A+KQY V E K
Sbjct: 228 -----LLFSATFDDTVKNFATRIVAKKEHNEYFVKKEELSL-EAVKQYKVKCTDELAKIE 281
Query: 260 ---DKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLS 316
D + +L E++ + +IF+ T+ + + L G+ SI G ERD ++
Sbjct: 282 VIKDYIFELGENV---GQTIIFVRTRNSAKMLHKSLVDFGYEVTSIQGALQTEERDTIIK 338
Query: 317 EFKSGKSPIMTATDVAARGLDVKDVKYVINYDFP 350
EFK G + ++ +TDV +RG D V VINYD P
Sbjct: 339 EFKDGLTQVLISTDVLSRGFDQDQVNLVINYDLP 372
>Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:37010922-37003111 | 20130731
Length = 604
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 177/409 (43%), Gaps = 78/409 (19%)
Query: 2 TEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMA 61
TE E+DE R +F ++G ++ + K +PTPIQ P+
Sbjct: 17 TEQEIDEDR-----------------SFEELGLDARLVRALLKKRIEKPTPIQHVAIPLI 59
Query: 62 LKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECT 121
L+G+D++ A+TGSGKTLAYLLP + + + P V VLAP+REL QI E
Sbjct: 60 LEGKDVVARAKTGSGKTLAYLLPLLQKLFTANVDRKKLAPNVFVLAPSRELCQQIYVE-- 117
Query: 122 KFGASSRIKSTCIYGGVP-KGPQVR------DLQKGV----EIVIATPGRLIDMLESHHT 170
+KS VP K Q+ DLQ + +++I+TP + L +
Sbjct: 118 -------VKSLLELCKVPLKAVQLNSNMLATDLQAALVGPPDVLISTPACIAKCLSNSVL 170
Query: 171 NLRRVT----YLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKF 226
+ LVLDEAD +L G++ I+ + I Q L SAT +V++L +
Sbjct: 171 QAASINGSLETLVLDEADLLLSYGYENDIKALTPHIPRSCQCLLMSATSSDDVDKLKKLM 230
Query: 227 LYDPYKVII----GSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTK 282
L++P + + +D ++Q+ P K ++ +L+ + ++LIF +
Sbjct: 231 LHNPVILTLPEVGNRKDEVIPKNVQQFWIYCPANDKLLYILAMLKLELVQKKVLIFTNNI 290
Query: 283 KGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVA---------- 332
++ L G + ++ + Q R +L EF +G + ATD++
Sbjct: 291 DTSFRLKLFLEKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDISQSTEKDEAPK 350
Query: 333 -----------------------ARGLDVKDVKYVINYDFPGSLEDYVH 358
RG+D K+V VIN++ P S+ YVH
Sbjct: 351 ENIVGSKKSRKYTKLKLDSEFGVVRGIDFKNVYTVINFEMPRSVTGYVH 399
>Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:17543999-17545772 | 20130731
Length = 398
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 153/354 (43%), Gaps = 53/354 (14%)
Query: 46 GFVEPTPIQSQGWPMALKGRDLI-------GIAETGSGKTLAYLLPAIVHVNAQPILDPG 98
GF P+ IQ + +G +I G+ ET L L +VH A
Sbjct: 9 GFGRPSSIQQRVIAPFCEGLGVILQDPYGTGMLETFCIGILKKLDYGLVHCQA------- 61
Query: 99 DGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGG--VPKGPQVRDL--------- 147
LVLAPT EL +QI++ G +K GG VPK + R L
Sbjct: 62 -----LVLAPTMELVLQIKEVMQDLGRFHGVKIHACVGGTSVPKEDRQRFLKVGYNSYIV 116
Query: 148 ------------------QKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDM 189
+ GV I++ TP + DML+ T L + V+DE D+ML +
Sbjct: 117 EGTSNVYDIIDMDGQFIFKGGVHIIVGTPRCVYDMLQRGRTRLDCIKMFVMDEVDQMLSL 176
Query: 190 GFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQY 249
GF +I +I + Q SAT P E ++ RKF+ P + ++L + Y
Sbjct: 177 GFKDKIDEIFKLLPCKIQVGVISATMPPEALEITRKFMKKPVTIQAKPDELTLEGIKQFY 236
Query: 250 VDIVPEKQKYDKLVKLLEDIMDGSRI---LIFMDTKKGCDQITRQLRMDGWPALSIHGDK 306
VD+ E+ K + L + E + I ++F+DT+ D +T +++ I D
Sbjct: 237 VDVEKEEWKLETLCDIFELTVKAKSITHCIVFVDTRCKVDWLTDKMQSRDHKVSVIQSDM 296
Query: 307 SQAERDWVLSEF--KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
Q RD ++ EF +SG ++ TD G DV V ++NYD P + E+Y++
Sbjct: 297 DQNTRDIIVREFFSQSGSPHVLITTDPLVCGTDVHKVSLIVNYDLPAAPENYLY 350
>Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6241938-6240697 | 20130731
Length = 325
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 29/301 (9%)
Query: 59 PMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQ 118
P KG D+I +G+G + + + + ++ + LVLAPT ELA+QI+Q
Sbjct: 4 PPFCKGHDVILQDPSGTGMSATFCIGILKMLDYELAHCQA-----LVLAPTNELALQIKQ 58
Query: 119 ECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYL 178
G ++ GG+ V DLQ+ +++ +
Sbjct: 59 VMQDLGQFHGVRIHACVGGI--SAPVEDLQRFMQVF--------------------TLLV 96
Query: 179 VLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSE 238
V+DE D ML F+ +I KI + Q S+T P E ++ RKF+ P + +
Sbjct: 97 VMDEVDEMLSCDFEEKIDKIFQLLPYKIQVGVISSTMPPEALEITRKFMKKPVTIQAKRD 156
Query: 239 DLKANHAIKQ-YVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGW 297
+L IKQ YV++ EK K + L + + ++F++T++ D + ++R +
Sbjct: 157 ELTTLEGIKQFYVNVDEEKWKLETLYDIYTTKF-ITHCIVFVNTERKVDWLMDKMRSRYY 215
Query: 298 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
L+IH D Q RD ++ F+SG I+ TD GLDV++V VINYD P E+Y+
Sbjct: 216 TVLTIHDDMDQNTRDIIVRNFQSGSPQILITTDPLVYGLDVQEVSLVINYDLPTLPENYL 275
Query: 358 H 358
H
Sbjct: 276 H 276
>Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:21843191-21840034 | 20130731
Length = 276
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 122/218 (55%), Gaps = 28/218 (12%)
Query: 28 TFNDVGFPEYVLEEVK-KAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 86
+F+ +G + + ++++ + GF PT IQ+Q P+ L GR + A TG+GKT+AYL P I
Sbjct: 41 SFSSLGLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPII 100
Query: 87 VHVNA-QPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSR-IKSTCIYGGVPKGPQV 144
H+ + + DG LVL PTREL +Q+ + K I I GG + +
Sbjct: 101 HHLQSYDKRVQRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKEK 160
Query: 145 RDLQKGVEIVIATPGRLIDMLESH----HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 200
L+KG+ I+IATPGRL+D L++ +TNLR +++ DEADR+L++GF +I++I++
Sbjct: 161 ARLRKGISILIATPGRLLDHLKNTSSFVYTNLR---WIIFDEADRILELGFGKEIQEILN 217
Query: 201 QI---------------RPD---RQTLYWSATWPKEVE 220
+ RP RQ L SAT ++++
Sbjct: 218 LLGSMKTGHDDQESGVPRPSKFQRQNLLLSATLNEKLK 255
>Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:54963018-54968467 | 20130731
Length = 480
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 169/377 (44%), Gaps = 45/377 (11%)
Query: 16 TVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGS 75
T + VP ++ P+ +L+ +++ G+V PTP+Q Q P GRD I A+TGS
Sbjct: 70 TADDDTVPITLRQLCQSHVPDQLLQRMEEVGYVMPTPVQKQALPRLFSGRDCILHAQTGS 129
Query: 76 GKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSR----IKS 131
GKTLAYLL ++ + LVL PTREL +Q+ + A +
Sbjct: 130 GKTLAYLLLIYSIISTR-----KSSFQALVLVPTRELGMQVTKVARILAAKPTGVEGEQR 184
Query: 132 TCIYGGVPKGPQVRDLQKGVE-----IVIATPGRLIDMLESHHTNLRRVTYLVLDEADRM 186
+C + G +R + + IV+AT L MLE +L + LV+DE D +
Sbjct: 185 SCTIMALLDGGTLRRHKSWFKAEPPAIVVATVESLCQMLERQLFSLGNLRVLVVDEVDFI 244
Query: 187 LDMGFD-PQIRKIVSQIRP--DRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKAN 243
+ +RKI++ +RQT++ SA+ P+ +FL + + D+
Sbjct: 245 FNSSKQVSSLRKILTSYSSCNNRQTVFASASIPQH-----NQFLNEAVQQKWTKRDVIHI 299
Query: 244 HA---------IKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMD----TKKGCDQITR 290
H + + K+K L+ L++ S I+ + +KK + +
Sbjct: 300 HVSPVEPMPSRLSHRFIVCDIKRKLQTLLSLIQSDAPESGIIFVSEQSEKSKKAGNSPST 359
Query: 291 QLRMDGWPALSIHG---------DKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDV 341
L +D + S HG D + R L E + G ++ ATDVAARG+D ++
Sbjct: 360 SLVID-FLKTSYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEM 418
Query: 342 KYVINYDFPGSLEDYVH 358
++ NYD P + DY+H
Sbjct: 419 THIYNYDLPKTAIDYLH 435
>Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46124357-46130061 | 20130731
Length = 401
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 126/236 (53%), Gaps = 20/236 (8%)
Query: 134 IYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTY-----LVLDEADRMLD 188
+ GG + + L KG+ IV+ATPGRL+D L+ N +R Y L++DEADR+L+
Sbjct: 22 VIGGSARRTEAESLAKGINIVVATPGRLLDHLQ----NTKRFIYNNLKCLIIDEADRILE 77
Query: 189 MGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR-KFLYDPYKVII--GSEDLKANHA 245
F+ ++++I+ + +RQT +SAT K+VE LAR F P + + G + +
Sbjct: 78 ANFEDELKQIIKLLPKNRQTALFSATQTKKVEDLARLSFQTTPIYIDVDDGRKKVTNEGL 137
Query: 246 IKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPAL---SI 302
++ YV +VP +++ L L+ ++++F + C+ + + L SI
Sbjct: 138 LQGYV-VVPCAKRFMVLYSFLKR-HKSKKVMVFFSS---CNSVKFHADIFNHIHLHCSSI 192
Query: 303 HGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
+G + Q R +F + I+ TDVAARGLD+ V +++ YD P ++Y+H
Sbjct: 193 YGKQKQQTRTTTFVDFCQAEKGILLCTDVAARGLDIPSVDWILQYDPPDEPKEYIH 248
>Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40426461-40421694 | 20130731
Length = 536
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 113/200 (56%), Gaps = 7/200 (3%)
Query: 164 MLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLA 223
M E+ + + ++ LVLDEADR+LD GF ++ I+SQ+ RQT+ +SAT K V+ LA
Sbjct: 1 MDETPNFDCSQMQVLVLDEADRILDSGFKKEVNAIISQLPKRRQTMLFSATQTKSVQDLA 60
Query: 224 RKFLYDPYKVIIGSEDLKAN-HAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTK 282
R L DP + + E + A +KQ V IVP QK D L ++ + S+ L+F+ +
Sbjct: 61 RLSLKDPEYISVHEESVTATPTLLKQTVMIVPLDQKLDMLWTFIKRHLQ-SKTLVFLSSC 119
Query: 283 KGCD---QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDV- 338
K ++ ++L G P +HG Q +R + SEF K ++ +TDVAARGLD
Sbjct: 120 KQVKFVFEVFKKLH-PGIPLKCLHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAARGLDFN 178
Query: 339 KDVKYVINYDFPGSLEDYVH 358
K V +V+ D P ++ Y+H
Sbjct: 179 KAVDWVVQVDCPENVASYIH 198
>Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25904178-25909316 | 20130731
Length = 535
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 6/199 (3%)
Query: 164 MLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLA 223
M E+ + + ++ LVLDEADR+LD GF ++ I+SQ+ RQT+ +SAT K V+ LA
Sbjct: 1 MDETPNFDCSKMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTMLFSATQTKSVQDLA 60
Query: 224 RKFLYDPYKVIIGSEDLKAN-HAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTK 282
R L DP + + E + A +KQ V IVP QK D L ++ + S+ L+F+ +
Sbjct: 61 RLSLKDPEYISVHEESVTATPTLLKQKVMIVPLDQKLDMLWNFIKTHL-KSKTLVFLSSC 119
Query: 283 KGCDQITRQLR--MDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDV-K 339
K + + G P +HG Q +R + SEF K I+ ATDVAARGLD +
Sbjct: 120 KQVKFVFEAFKKLHPGIPLKCLHGRMKQEKRMAIYSEF-CEKCSILFATDVAARGLDFNR 178
Query: 340 DVKYVINYDFPGSLEDYVH 358
V +V+ D P ++ Y+H
Sbjct: 179 AVDWVVQVDCPENVASYIH 197
>Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890320-18881902 | 20130731
Length = 492
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 135/298 (45%), Gaps = 76/298 (25%)
Query: 134 IYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESH----HTNLRRVTYLVLDEADRMLDM 189
I GG + + L+KG+ I+IATPGRL+D L++ +TNLR +++ DEADR+L++
Sbjct: 32 IMGGESRSKEKARLRKGISILIATPGRLLDHLKNTSSFVYTNLR---WIIFDEADRILEL 88
Query: 190 GFDPQIRKIVSQI---------------RP---DRQTLYWSATWPKEVEQLARKFLYDPY 231
GF +I++I++ + RP RQ L SAT ++V LA+ L DP
Sbjct: 89 GFGKEIQEILNLLGSMKTGHDDQGNGVPRPTKFQRQNLLLSATLNEKVNHLAKISLEDPV 148
Query: 232 KVIIGSEDLKANHAIK------------QYVDIVPEKQKY---DKLVKLLEDIMDGSRIL 276
+ I + L+ I+ Y +P Y ++L++ + GSR+
Sbjct: 149 MIGIDDKVLEPTSKIRFDNSDCDEDNEGTYSSKIPAVGAYKVPEQLIQRYMKVPCGSRLA 208
Query: 277 IFMDTKKG----------------CDQITRQLRM--------------------DGWPAL 300
I + K CD + + G L
Sbjct: 209 ILLSILKHLFEREPSQKIVLFFSTCDAVDFHYSLLTEFLFSAFPQTEEGNRPMFLGCKTL 268
Query: 301 SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
+HG+ Q +R FK+ KS ++ +TDV+ARGLD +V+ +I YD PG +YVH
Sbjct: 269 RLHGNMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVH 326
>Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:7041752-7035027 | 20130731
Length = 462
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 70/338 (20%)
Query: 26 VKTFNDVGFPEYVLEEV-KKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLP 84
+K+F D+G ++E K+ + +P IQ+Q P+AL+G+D+ I+ SGKT A++LP
Sbjct: 1 MKSFTDLGLSLQLVEVCEKQLDWYDPLKIQAQVIPLALEGKDVYAISPPRSGKTGAFVLP 60
Query: 85 AIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQV 144
+N A +I + G +K + Q
Sbjct: 61 IFQALN---------------------FAFEIARYFEALGQHFGVKFAVLVSTSDMEYQT 99
Query: 145 RDLQKGVEIVIATPGRLIDML-ESHHTNLRRVTYLVLDEADRMLDMGF---DPQIRKIVS 200
+ + I++ATPG+L+ L ++ +LR++ YLVLDEA +L+ + D Q+ I+
Sbjct: 100 NKILQQPHIIVATPGKLVKHLKDTPAFSLRKLKYLVLDEA-HLLESNYKHIDRQLEFILG 158
Query: 201 QIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYD 260
+I +R T +S + +V+ + FL +P K+ + +I+ PE+Q+
Sbjct: 159 KIPRNRTTFLFSDSKTDKVDMIQSVFLRNPVKI---------DESIE-----YPEQQQCH 204
Query: 261 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKS 320
K D++ +P SQA+R L+ FKS
Sbjct: 205 MPAK---------------------DKV--------YPLPCPKNIVSQAKRLEALNAFKS 235
Query: 321 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
G I+ D+A+RGLD+ V VINYD P DY+H
Sbjct: 236 GNCKILLCNDLASRGLDIPAVDTVINYDIPDDPRDYMH 273
>Medtr8g032230.1 | DEAD-box helicase family protein | HC |
chr8:12119817-12118310 | 20130731
Length = 171
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 24 KPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLL 83
K +K+F D+G E ++E +K G+ P IQ + P AL+G+D+IG ++TGSGKT A+ L
Sbjct: 6 KEIKSFKDLGLDELLVEAFEKMGWKNPKEIQLKAIPQALQGKDVIGFSQTGSGKTGAFAL 65
Query: 84 PAIVHVNAQPILD-PGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGP 142
P I+H +LD P G V++PTRELA Q+ ++ G+ +K + G +
Sbjct: 66 P-ILHA----LLDAPRHGFFACVISPTRELAYQVPEQFEALGSEIGVKCAVLVGQMDMVQ 120
Query: 143 QVRDLQKGVEIVIATPGRLIDMLE-SHHTNLRRVTYLV 179
Q ++ KG +I + TPGR++D L+ + +L R+ YLV
Sbjct: 121 QSIEIAKGPDIFVGTPGRVLDHLKNTKGFSLDRLKYLV 158
>Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561636 | 20130731
Length = 314
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 12/206 (5%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F D +L + +GF P+ +Q + P A+ G D+I A++G GKT ++L +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 89 VNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGAS-SRIKSTCIYGGVPKGPQVRD 146
+ DP G + LVL TRELA QI E +F +K YGGV +D
Sbjct: 108 I------DPVPGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVH-KD 160
Query: 147 LQKGV--EIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLD-MGFDPQIRKIVSQIR 203
L K +IV+ TPGR++ + + +L+ V + VLDE D+ML+ + ++ I
Sbjct: 161 LLKNECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTP 220
Query: 204 PDRQTLYWSATWPKEVEQLARKFLYD 229
D+Q + +SAT KE+ + +KF+ D
Sbjct: 221 HDKQVMMFSATLSKEIRPVCKKFMQD 246
>Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49558567 | 20130731
Length = 314
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 12/206 (5%)
Query: 29 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 88
F D +L + +GF P+ +Q + P A+ G D+I A++G GKT ++L +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 89 VNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGAS-SRIKSTCIYGGVPKGPQVRD 146
+ DP G + LVL TRELA QI E +F +K YGGV +D
Sbjct: 108 I------DPVPGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVH-KD 160
Query: 147 LQKGV--EIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLD-MGFDPQIRKIVSQIR 203
L K +IV+ TPGR++ + + +L+ V + VLDE D+ML+ + ++ I
Sbjct: 161 LLKNECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTP 220
Query: 204 PDRQTLYWSATWPKEVEQLARKFLYD 229
D+Q + +SAT KE+ + +KF+ D
Sbjct: 221 HDKQVMMFSATLSKEIRPVCKKFMQD 246
>Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:16475815-16482952 | 20130731
Length = 462
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 151/328 (46%), Gaps = 37/328 (11%)
Query: 51 TPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTR 110
T IQ++ P+ L+G DL + GSGKTLAYL+PA+ H+ + +P DG IV+VL P
Sbjct: 41 TSIQAKAIPLLLRGDDLAAYSSNGSGKTLAYLIPALDHL-CKNKYEPDDGIIVMVLCPNT 99
Query: 111 ELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHT 170
+A+QI ++ S I G + P R ++K ++IATP L HH
Sbjct: 100 MVAIQIDRDIKTILKDSPQTLQTI-GRLIASPGDRYVRKN--LLIATPAGL----RYHHA 152
Query: 171 -NLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKE--------VEQ 221
+ R+ Y D++ + FD ++ + ++ + + +PKE V +
Sbjct: 153 YDPERIKY------DKLKFLIFDDPY--LILRFSDQKKWNWVRSNFPKEQLQIAIFSVTK 204
Query: 222 LARKFLYD---------PYKVI--IGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIM 270
L R+ L + VI + + N ++Q +VP ++ L +L+
Sbjct: 205 LKRECLLRLLPEGRRPGDFSVIDEVQNRQWVTNDRLEQEFILVPCAKRLITLYIMLKT-T 263
Query: 271 DGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATD 330
++++F T + +HGD++ +E + F + + I+ T+
Sbjct: 264 KSKKVMVFFSTTESVKFHEELFTFLDVKCYGVHGDQTVSEHSKIYYSFSNAEEMILLCTN 323
Query: 331 VAARGLDVKDVKYVINYDFPGSLEDYVH 358
+AA GL++ DV ++ YD P E+Y+H
Sbjct: 324 IAAFGLNIPDVDLIVQYDPPIDPEEYIH 351
>Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:33157541-33150855 | 20130731
Length = 497
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 156/361 (43%), Gaps = 75/361 (20%)
Query: 65 RDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFG 124
RD+ + TGSGKTLAY LP + ++ + LV+ PTR+LA+Q++Q
Sbjct: 70 RDICVNSPTGSGKTLAYALPLVQMLSGRVT----KCLRALVVVPTRDLALQVKQVFDAVA 125
Query: 125 ASSRIKSTCIYGGVPKGPQVRDL----------------------QKGVEIVIATPGRLI 162
+ ++ G ++ +L Q V+I++ATPGRL+
Sbjct: 126 SPLGLRVGLAVGQSSLADEISELVEMPARDIGTCYDPHCISLPRFQSKVDILVATPGRLM 185
Query: 163 DMLESH-HTNLRRVTYLVLDEADRMLDMGFD---PQIRKIV------------------- 199
D + + L + YLV+DE DR+L + P + +++
Sbjct: 186 DHINTTIGFTLEHLYYLVVDETDRLLREAYQSWLPTVLELIQSNDDGFSLPSASFFPCSA 245
Query: 200 SQIRPDRQT----------------LYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKAN 243
S +R R+ + SAT ++ +L + L+ P + G +
Sbjct: 246 SALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRLIQLNLHHPLLLKAGQMRYRLP 305
Query: 244 HAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFM----DTKKGCDQIT--RQLRMDGW 297
++ Y I +K K L+ LL+ + + + L+F T + C + LR+D
Sbjct: 306 ENLESYKLICEKKVKPLYLIALLKSLGE-EKCLVFTKSVDSTHRLCQLLNCFEDLRIDIK 364
Query: 298 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
S+ + Q R L+EF+ G ++ ++D RG+DV+ V+ VINYD P ++ +V
Sbjct: 365 EYSSL---QHQRVRSKTLNEFRKGVFQVLLSSDALTRGMDVEGVRNVINYDVPKFIKTHV 421
Query: 358 H 358
H
Sbjct: 422 H 422
>Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525936-18516322 | 20130731
Length = 728
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 150/320 (46%), Gaps = 21/320 (6%)
Query: 46 GFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLV 105
G+ + +Q + L GRD + TG GK++ Y +PA+ ++ P ++
Sbjct: 39 GYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIVLVVCP-----LIA 93
Query: 106 LAPTRELAVQIQQECTKFGASSRIKSTC--IYGGVPKG-PQVRDLQKGVEIVIATPGRLI 162
L + +A++ + +F +S++ I+ + G P R L E+ IATPG +
Sbjct: 94 LMENQVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPEL-IATPGFMS 152
Query: 163 DMLESHHTNLRRVTYLVLDEADRMLDMGFD--PQIRKIVSQIR---PDRQTLYWSATWPK 217
+ + H L ++ + +DEA + G D P RK+ S +R PD L +AT
Sbjct: 153 KLTKIHSRGL--LSLIAIDEAHCISSWGHDFRPTYRKL-STLRSHLPDVPILALTATAVP 209
Query: 218 EVEQLARKFLYDPYKVIIGSEDLKANHAIK-QYVDIVPEKQKYDKLVKLLEDIMDGSRIL 276
+V++ + L+ +I+ + + N + +Y D++ + Y L L+ + D I+
Sbjct: 210 KVQKDVVESLHMQNALILKTSFNRPNIYYEVRYKDLLDDS--YSDLSDRLKSMGDVCAII 267
Query: 277 IFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGL 336
++ + CD ++ L G + H + R VL ++ S K+ ++ AT G+
Sbjct: 268 YCLE-RSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGMGI 326
Query: 337 DVKDVKYVINYDFPGSLEDY 356
D KDV+ V +++ P S+E +
Sbjct: 327 DRKDVRIVCHFNIPKSMEAF 346
>Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525893-18516340 | 20130731
Length = 727
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 150/320 (46%), Gaps = 21/320 (6%)
Query: 46 GFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLV 105
G+ + +Q + L GRD + TG GK++ Y +PA+ ++ P ++
Sbjct: 39 GYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIVLVVCP-----LIA 93
Query: 106 LAPTRELAVQIQQECTKFGASSRIKSTC--IYGGVPKG-PQVRDLQKGVEIVIATPGRLI 162
L + +A++ + +F +S++ I+ + G P R L E+ IATPG +
Sbjct: 94 LMENQVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPEL-IATPGFMS 152
Query: 163 DMLESHHTNLRRVTYLVLDEADRMLDMGFD--PQIRKIVSQIR---PDRQTLYWSATWPK 217
+ + H L ++ + +DEA + G D P RK+ S +R PD L +AT
Sbjct: 153 KLTKIHSRGL--LSLIAIDEAHCISSWGHDFRPTYRKL-STLRSHLPDVPILALTATAVP 209
Query: 218 EVEQLARKFLYDPYKVIIGSEDLKANHAIK-QYVDIVPEKQKYDKLVKLLEDIMDGSRIL 276
+V++ + L+ +I+ + + N + +Y D++ + Y L L+ + D I+
Sbjct: 210 KVQKDVVESLHMQNALILKTSFNRPNIYYEVRYKDLLDDS--YSDLSDRLKSMGDVCAII 267
Query: 277 IFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGL 336
++ + CD ++ L G + H + R VL ++ S K+ ++ AT G+
Sbjct: 268 YCLE-RSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGMGI 326
Query: 337 DVKDVKYVINYDFPGSLEDY 356
D KDV+ V +++ P S+E +
Sbjct: 327 DRKDVRIVCHFNIPKSMEAF 346
>Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:26237354-26229767 | 20130731
Length = 594
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 23/209 (11%)
Query: 28 TFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI- 86
+++ +G + + P+ +Q+ P L G+D++ AETGSGKT +YLLP I
Sbjct: 91 SWSSIGLSHTLSRALSNIALNTPSLVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLID 150
Query: 87 ---------VHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGG 137
+ V + + P ++LVL P +L Q+ + + T +
Sbjct: 151 KLRGTEEYSLDVVSDKEISPPARKVLLVLCPNVQLCEQVVRMANSLCGDN--DETIVSAA 208
Query: 138 VPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRR-------VTYLVLDEADRMLDMG 190
G Q +++ +I++ TP L++ ++ + RR V Y+V DEAD +L
Sbjct: 209 AICGKQGWPIREP-DIIVTTPAALLNHVD---VDRRRRMEFMHGVKYVVFDEADMLLCGS 264
Query: 191 FDPQIRKIVSQIRPDRQTLYWSATWPKEV 219
F ++ ++++ +R D + L S T E+
Sbjct: 265 FQNKVIRLINLLRYDEKLLSRSKTSVSEL 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 23/244 (9%)
Query: 196 RKIVSQIRPDRQTLYWSATWP---KEVEQLARKFLYDPYKVIIGSEDLKANHAIKQ-YVD 251
R++ +Q ++ +AT P K+ K ++ + + G+ N +KQ +++
Sbjct: 347 RRVRKHFERSKQYVFVAATLPVNGKKTAGALLKHMFPDAEWVSGNYLHCHNPRLKQRWIE 406
Query: 252 IVPEKQKYDKLVKL-----LEDIMDGS---RILIFMDTKKGCDQITRQLRMDGWPALSIH 303
+ + Q + + + LED+ GS R ++F +T + + + + L G L H
Sbjct: 407 VTVDTQVKELIRAVNHSLKLEDLDIGSGIHRTMVFANTVEAVEAVVKILGYAGLECLRYH 466
Query: 304 GDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXX 363
+ + ER L +F K ++ TD AARG+D+ +V +VI DF S D++H
Sbjct: 467 KNCTLDERAQTLVDFYD-KGGVLVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRT 525
Query: 364 XXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSGGFRDRGKG 423
+T +N +EL+ + AG+ P A R FR++ K
Sbjct: 526 ARAGQIGLVTSMYTESN----RELVDAVRRAGELGLPVETAFSR------KRSFRNKIKK 575
Query: 424 YGSG 427
S
Sbjct: 576 KASA 579
>Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC |
chr8:34428957-34437037 | 20130731
Length = 917
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 33/318 (10%)
Query: 54 QSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELA 113
Q + L G+ + I TG+GK+L Y L A++ PG I LV++P L
Sbjct: 281 QLEAIKNVLAGKSTMLILPTGAGKSLCYQLSALIL--------PG---ITLVVSPLVALM 329
Query: 114 VQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKG-VEIVIATPGRLIDM-LESHHTN 171
+ ++ + + + S + + L++G ++++ +P R ++ S +
Sbjct: 330 IDQLRQLPPLISGALLSSAQTFE--ESSETLNQLRQGTIKVLFVSPERFLNEEFLSVISG 387
Query: 172 LRRVTYLVLDEADRMLD--MGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYD 229
V+ +V+DEA + + F P ++ R +L + + +
Sbjct: 388 GLAVSLVVIDEAHCISEWSHNFRPSFMRL-------RASLLHKSLNVGSILAMTATATTT 440
Query: 230 PYKVIIGSEDLKANHAIKQ-------YVDIVPEKQKYDKLVKLLED--IMDGSRILIFMD 280
I+ + D+ + I+ + + K + L+ L++ + I+++
Sbjct: 441 TLDAIMSALDIPRTNLIQNAHLRDNLCLSVSLIKNRMKDLLVLMKSSPFAEVKSIIVYCK 500
Query: 281 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKD 340
+ DQI+R L + A S H S ER +V F S K ++ AT GLD +D
Sbjct: 501 FQSETDQISRYLNDNNIKAKSYHSGISAKERGYVQELFGSNKIRVVVATVAFGMGLDKRD 560
Query: 341 VKYVINYDFPGSLEDYVH 358
V VI+Y PGSLE+YV
Sbjct: 561 VGAVIHYSLPGSLEEYVQ 578
>Medtr2g031570.1 | DEAD-box helicase family protein | LC |
chr2:11922449-11924042 | 20130731
Length = 140
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 58/92 (63%)
Query: 2 TEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMA 61
T E+ RL++ +T + K +K+F D+G E ++E +K G+ P IQ++ P+A
Sbjct: 46 TSPELFTGRLKQLVTENMEEENKEMKSFKDLGLSEQLVEACEKIGWKNPKEIQTEVIPLA 105
Query: 62 LKGRDLIGIAETGSGKTLAYLLPAIVHVNAQP 93
L+G+D+IGI+ T SGKT A++LP + + QP
Sbjct: 106 LQGKDVIGISNTSSGKTGAFVLPILHALALQP 137
>Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC |
chr3:28524625-28534220 | 20130731
Length = 908
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 146/322 (45%), Gaps = 30/322 (9%)
Query: 46 GFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLV 105
GF+ P Q + ++ RD + + TGSGK+L Y +P +V ++ P ++
Sbjct: 13 GFLSFRPYQREVIEKIIEKRDCLVVMATGSGKSLCYQVPPLVVKKTGIVVSP-----LIS 67
Query: 106 LAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 165
L + +A++ Q+ SS K + +G +I+ TP + +
Sbjct: 68 LMQDQVMALK-QRGIKAEYLSSAQKDYTVQSKAERGQ--------FDILFMTPEKACTIP 118
Query: 166 ESHHTNLRR--VTYLVLDEADRMLDMGFDPQIR-KIVSQIRP---DRQTLYWSATWPKEV 219
S +NL + ++ +DEA + + G D ++ K + ++R D + +AT ++V
Sbjct: 119 TSFWSNLLKEGISLFAVDEAHCISEWGHDFRVEYKQLDKLRGVLLDVPYVGLTATATEKV 178
Query: 220 E-QLARKF-LYDPYKVIIGSEDL-KANHAIKQYVDIVPEKQKY-DKLVK-LLEDIMDGSR 274
+ + +PY V++GS D + +KQ+ Q + D+LV+ + +++ +G
Sbjct: 179 RFDITNSLKMNNPY-VVVGSFDRPNLFYGVKQF----NRGQSFIDELVEEVSKEVANGCS 233
Query: 275 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAAR 334
+I+ T K +QI + L G A HG R+ F + IM AT
Sbjct: 234 TIIYCTTIKDVEQIYKSLTEVGINAGMYHGQMDGKSREESHRLFVRDEMQIMVATIAFGM 293
Query: 335 GLDVKDVKYVINYDFPGSLEDY 356
G+D +++ VI+Y P +LE Y
Sbjct: 294 GIDKPNIRKVIHYGCPKNLESY 315
>Medtr1g050730.1 | DEAD-box helicase family protein | HC |
chr1:19639763-19632815 | 20130731
Length = 532
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 129/310 (41%), Gaps = 20/310 (6%)
Query: 99 DGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGV-EIVIAT 157
D P +L L P+ + A Q++ C S I + ++ G Q++ L+ E +I+T
Sbjct: 214 DTPFLLFLVPSEKKAGQVRTVCKPL-KSVGIHTVSVHPGASLDHQIQGLKSCEPEFLIST 272
Query: 158 PGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPK 217
P RL++++ ++ ++ LV+D D + G I+ I I + + ++ ++
Sbjct: 273 PERLLELVSLKAIDISGISMLVIDGFDAICKAGHADAIKSIKKFISGNPSLVVFNDSFNH 332
Query: 218 EVEQLARKFLYDP-YKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDI------- 269
+ R L P ++ I + + I Q V + + DKLVK +E +
Sbjct: 333 TSIPVVRHLLTGPICRISINNSIASLSSCIVQSVQVCTSDE--DKLVKSIEVLRQFRSSQ 390
Query: 270 MDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTAT 329
S +L + C ++ + L+ G + S+ D + D V S + ++T
Sbjct: 391 THSSNLLYILRKDVKCHKLVKTLKSMGC-STSLDSDAATI-NDSVDSNRR-----LVTMI 443
Query: 330 DVA-ARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELI 388
D+ LD+ ++ S++ Y H F T ++ A LI
Sbjct: 444 DLEDISTLDIGMYDVIVLPSLVPSMDTYEHILTNMARQSVNGILHGFLTKSDTEHAGPLI 503
Query: 389 TILEEAGQRV 398
+ILE+ GQ V
Sbjct: 504 SILEQCGQEV 513
>Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37328725-37334465 | 20130731
Length = 603
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 144/346 (41%), Gaps = 36/346 (10%)
Query: 26 VKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPA 85
+KT +D+ V+ G P+Q Q AL +D + TG GK+L Y LPA
Sbjct: 183 LKTLDDIELANVVI-----FGNKSLRPLQHQACKAALAKQDSFILMPTGGGKSLCYQLPA 237
Query: 86 IVHVNAQPILDPGDGPIVLVLAPTRELAV-QIQQECTKFGASSRIKSTCIYGGVPKGPQV 144
L PG + +V++P L QI KFG + ++ +
Sbjct: 238 --------TLQPG---VTVVVSPLLSLIQDQIITLNLKFGIPATFLNS-QQNASQAAAVL 285
Query: 145 RDLQK---GVEIVIATPGRL------IDMLESHHTNLRRVTYLVLDEADRMLDMGFD--P 193
++L+K +++ TP R+ + +L+ H ++ V+DEA + G D P
Sbjct: 286 QELRKDKPSCKLLYVTPERIAGNQSFVGILKCMHQK-GQLAGFVVDEAHCVSQWGHDFRP 344
Query: 194 QIRKIVS--QIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVD 251
R + S Q P + +AT V + L P+ +++ + N +Y
Sbjct: 345 DYRGLGSLKQNFPRVPVMALTATATHPVREDILNALRIPHAIVLERSFDRPN---LKYEV 401
Query: 252 IVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDG-WPALSIHGDKSQAE 310
IV K+ +L +LL D +++ +K C +++ L A H + +
Sbjct: 402 IVKTKEPLKQLGQLLMDRFKSQCGIVYCLSKSECVDVSKFLNEKCKIKAAYYHAGLAARQ 461
Query: 311 RDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDY 356
R V ++ G+ I+ AT G+D DV++VI+ S+E Y
Sbjct: 462 RVAVQKKWHDGEVHIVCATIAFGMGIDKADVRFVIHNTMSKSIESY 507
>Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr2:578880-586948 | 20130731
Length = 1159
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 140/325 (43%), Gaps = 43/325 (13%)
Query: 52 PIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRE 111
P Q + + G D+ + TG GK+L Y LPA++ +PG I LV++P
Sbjct: 411 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALI--------NPG---ITLVISP--- 456
Query: 112 LAVQIQQECTKFGASSRIKSTCIYGGVPKGPQ---VRDLQKGV---EIVIATPGR----- 160
L IQ + + I + + + Q +R+L +++ TP +
Sbjct: 457 LVSLIQDQIMHL-LQANIPAAYLSANLEWAEQQEILRELNSDYCKYKLLYVTPEKVARSD 515
Query: 161 -LIDMLESHHTNLRRVTYLVLDEADRMLDMGFD----PQIRKIVSQIRPDRQTLYWSATW 215
L+ LES H ++ +V+DEA + G D Q ++ Q P+ L +AT
Sbjct: 516 VLLRQLESLHGR-ELLSRIVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNTPVLALTATA 574
Query: 216 PKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKY----DKLVKLLEDIMD 271
V++ + L V+ + N + +VP+ +K DK ++ E+ D
Sbjct: 575 TASVKEDVVQALGLVNCVVFRQSFNRPN----LWYSVVPKTKKCLEDIDKFIR--ENHFD 628
Query: 272 GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDV 331
I I+ ++ C+++ +L+ G HG +R V ++ + I+ AT
Sbjct: 629 ECGI-IYCLSRMDCEKVAEKLQECGHKCAFYHGSMDPDQRAHVQRQWSKDEINIICATVA 687
Query: 332 AARGLDVKDVKYVINYDFPGSLEDY 356
G++ DV++VI++ P S+E Y
Sbjct: 688 FGMGINKPDVRFVIHHSLPKSVEGY 712
>Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC |
scaffold0427:505-2043 | 20130731
Length = 227
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 26/166 (15%)
Query: 188 DMGF-DPQIRKI--VSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANH 244
D GF D +R I + + Q L++SAT V+ + + + I ++
Sbjct: 1 DDGFRDDSLRIIEKTQKFNSNCQVLFFSATLNDIVKNFVTRIVAKEHNEIFVKKEELPLK 60
Query: 245 AIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHG 304
A+KQY P D+L K+ C + + L + SI
Sbjct: 61 AVKQYKVHCP-----DELAKI------------------ECKNVAKALVDLSYKVNSILD 97
Query: 305 DKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFP 350
ERD ++ EFK G + ++ + DV ARG D V VINYD P
Sbjct: 98 ALEHEERDKMVKEFKDGSTGVLISNDVLARGFDQDQVNLVINYDLP 143
>Medtr6g040070.1 | DEAD/DEAH-box helicase | HC |
chr6:14397151-14388452 | 20130731
Length = 784
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 16/185 (8%)
Query: 26 VKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPA 85
V F ++G + ++E +++ G P+ IQ P L G+ L+ + + +TLAYLLP
Sbjct: 576 VGGFKELGMSDELIEVMEEIGEFVPSEIQCVVIPTILDGKSLLLSSPSQHDRTLAYLLPL 635
Query: 86 I--VHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQ 143
I + + + + P +VL + E Q ++ +KS K
Sbjct: 636 IQMLRRDRELLGSNSKYPRAVVLCASEEKVEQCFNAARYIIHNAEVKSA-------KNRA 688
Query: 144 VRDLQK---GVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRML-DMGFDPQIRKIV 199
D +K + ++I TP ++ +E + LVLDEAD ML F P+I KI
Sbjct: 689 SSDTEKSNSSIGLMIGTPYEILQYIEEGTIVPAELKCLVLDEADSMLGSSNFGPEINKI- 747
Query: 200 SQIRP 204
IRP
Sbjct: 748 --IRP 750
>Medtr8g018350.1 | eukaryotic translation initiation factor 4A1 | HC
| chr8:6234340-6233617 | 20130731
Length = 176
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 245 AIKQ-YVDIVPEKQKYDKLVKLLEDIMDG----SRILIFMDTKKGCDQITRQLRMDGWPA 299
+IKQ YVD+ E+ K + L + E + + ++F++T D +T ++R
Sbjct: 15 SIKQFYVDVDKEEWKLETLCDIFELTLKAYKSITHCIVFVNTIDKVDWLTDKMR--SRDH 72
Query: 300 LSIHGDKSQAERDWVLSEF--KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 357
IHGD+ Q D + EF +SG ++ TD G D+ V+NYD P E+Y+
Sbjct: 73 YVIHGDRDQNTMDTIEREFLFESGSPQVLITTDPLVCGTDLHKASLVVNYDLPTVPENYL 132
Query: 358 H 358
+
Sbjct: 133 N 133
>Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:34021263-34013553 | 20130731
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 204 PDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLV 263
P + SAT ++ +L + L+ P + G + ++ Y I +K K L+
Sbjct: 82 PRLAKMVLSATLTQDPGRLIQLNLHHPLLLKAGQMRYRLPENLESYKLICEKKVKPLYLI 141
Query: 264 KLLEDIMDGSRILIFM----DTKKGCDQIT--RQLRMDGWPALSIHGDKSQAERDWVLSE 317
LL+ + + + L+F T + C + LR+D S+ + Q R L+E
Sbjct: 142 ALLKSLGE-EKCLVFTKSVDSTHRLCQLLNCFEDLRIDIKEYSSL---QHQRVRSKTLNE 197
Query: 318 FKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
F+ G ++ ++D R +DV+ V+ VINYD P ++ YVH
Sbjct: 198 FRKGVFQVLLSSDALTREMDVEGVRNVINYDVPKFIKTYVH 238
>Medtr8g018330.1 | eukaryotic translation initiation factor 4A1 | LC
| chr8:6227164-6226359 | 20130731
Length = 177
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Query: 245 AIKQ-YVDIVPEKQKYDKLVKLLEDIMDGSRI---LIFMDTKKGCDQITRQLRMDGWPAL 300
+IKQ YVD+ E+ K + L + E + I ++F++T D + +LR
Sbjct: 15 SIKQFYVDVDKEEWKLETLCDIFELTLKAKSITHCIVFVNTMDKVDWLMDELRSRDHKVF 74
Query: 301 SIHGDKSQAERDWVLSEFKSGKSP--IMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 358
I SQ RD V EF S S ++ TD G DV ++NYD P E+Y+H
Sbjct: 75 VILKFFSQDIRDIVTREFFSQSSSPQVLITTDPQLCGADVHKASLIVNYDLPTVPENYLH 134