Miyakogusa Predicted Gene

Lj3g3v0290530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0290530.1 tr|Q5JQR9|Q5JQR9_ORYSJ OSJNba0093F12.23 protein
OS=Oryza sativa subsp. japonica GN=OSJNba0093F12.23
,58.23,6e-17,seg,NULL; Tudor/PWWP/MBT,NULL; PWWP,PWWP,CUFF.40470.1
         (772 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g015580.1 | tudor/PWWP/MBT superfamily protein | HC | chr8...   701   0.0  
Medtr8g015580.2 | tudor/PWWP/MBT superfamily protein | HC | chr8...   701   0.0  
Medtr5g007980.1 | tudor/PWWP/MBT superfamily protein | HC | chr5...   160   5e-39
Medtr4g077550.1 | tudor/PWWP/MBT superfamily protein | HC | chr4...   152   1e-36

>Medtr8g015580.1 | tudor/PWWP/MBT superfamily protein | HC |
           chr8:5106477-5100906 | 20130731
          Length = 782

 Score =  701 bits (1810), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/786 (52%), Positives = 481/786 (61%), Gaps = 29/786 (3%)

Query: 7   QMGSSGE---NGIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGR 63
           +MGSS E   NGI+AS GGLVWVRRRNGSWWPGRIM L ELS+  LVSPRSGTPVKLLGR
Sbjct: 6   EMGSSEESNINGINASVGGLVWVRRRNGSWWPGRIMSLDELSDGCLVSPRSGTPVKLLGR 65

Query: 64  EDASVDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELES 123
           +DASVDWYNLE+SKRVK FRC EY + IE               YARREDAILHALELES
Sbjct: 66  DDASVDWYNLEKSKRVKAFRCREYAEAIEKAKASAAGLGKKAVKYARREDAILHALELES 125

Query: 124 ARLGKESLNFCSRSDTLGGEPVGLAGESPIISCSGXXXXXXXXXXXXXXXXXXXXX-XXH 182
           A L K  L  CSRSD    E    AGE P++S S                          
Sbjct: 126 AHLDKAPLPLCSRSDKSDSEHGEPAGELPVMSNSSDDGNEDVIDDLSDSEDNSNSAPELS 185

Query: 183 QSEISLEEPNQNGSSKMQSLQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVPKTKVLG 242
           QS IS EEPN NGS K+ S+QGRRRRTPNDSEDDGTEGVKRM+GLEDLG GVV   K  G
Sbjct: 186 QSGISFEEPNHNGSLKIPSMQGRRRRTPNDSEDDGTEGVKRMKGLEDLGNGVVSNRKGQG 245

Query: 243 AGTPEIAQQDGALSGNSNTGNFLVNGTFVNGGKGHFSTLKRRRTQVANVHESLKRKNRRR 302
            G  EIAQ   A   +S TGN L NGT VN GK  +S+LKR+R+QV NVHE LKRKNRRR
Sbjct: 246 LGPTEIAQHVSASLNDSMTGNGLANGTSVNVGK-TYSSLKRKRSQVGNVHELLKRKNRRR 304

Query: 303 PLTKVLESTAMVSVPAICDGLTSSISSPSLGVTYSSNPSTLYSNELQERSPLANHVFVST 362
            LTKVLESTAMVSVP  CD    S SSP  G+T         ++  +      N+   + 
Sbjct: 305 TLTKVLESTAMVSVPVTCDQPPGSSSSPPCGITDVKISGLDSTDSKKPSGKEINNSDSAA 364

Query: 363 EAAFENGTSADIQEDGRETSQTNYTV-KENEASGISGQIWNDFSDKLFDVPFMKVGREER 421
           E A ENGTS  + + G +  Q N+ + KENE + I G +  D SD LFDVP + V  EE+
Sbjct: 365 ETACENGTSLTVHDQGSDIPQINHRIKKENETTEIPGLVGYDSSDILFDVPLVGVLEEEK 424

Query: 422 PLTGFSPVLASCSSGKPGVDVLGQQSRHLGQSEALSARNEGYS-TGFTSSIADHNITDLR 480
           P  G SP L SCS G P V  L Q+S    QSEA + RN   +  G TSS   H+I    
Sbjct: 425 PSPGISPTLVSCSFGMPEVSALEQKSCEASQSEAFALRNGSKNEAGCTSSAVGHDIVSDG 484

Query: 481 AEIGSSEWLSKGKRNSRHAR---KEALRTHVDMYDKFSTHLAGVENSDGYSQGTG--QKA 535
           AE  SS+W SKGKRN RH     K+  R ++ M  +   +L G  NSDG  +G G  QK 
Sbjct: 485 AEKDSSKWQSKGKRNLRHKSKNGKQVSRKYIGMDGESDAYLTGTRNSDGLCEGAGQKQKI 544

Query: 536 DWNITGAPVASYNGTSQARCKQVAEGELGGFRDLSKRIKGTRDVKLLPDRSLTPQVSLPY 595
           DWN TG   AS N TSQ  CK VAEG++ GFRDLSK I+GT         +  PQ SLPY
Sbjct: 545 DWNGTGVSNASNNCTSQINCKTVAEGQVEGFRDLSKHIEGT--------TAEPPQRSLPY 596

Query: 596 RQPRLPLAPNHPMLDCPGRNSCSDGSLYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGH 655
           RQ R  +   +   D PGRN  SDG+LYDVK+E+KSSYRPQHVPLVSLASKL+ +AFIGH
Sbjct: 597 RQSRFAINSRYETADFPGRNCSSDGTLYDVKLEVKSSYRPQHVPLVSLASKLSGKAFIGH 656

Query: 656 PLTVEVMPDGQCDDMMRMYGPGLEGGDTSGVVKPR---IKPXXXXXXXXXXXXXXXXXXX 712
           PLTVEV+ DG CD M+      +E  D   VVKP+    +                    
Sbjct: 657 PLTVEVLEDGHCDKMLSGLRRDVEVDDIDCVVKPKPVTTRRPKRSSHFSRRKSSKSKKSG 716

Query: 713 XXXXXTRKLSSLTGQKKSERK------KVGTPVVACIPLSVVFSRINEAVSGQARPAHRA 766
                 RKLSSLTG ++SE K      K+  PV+ACIPL++VFSRINEA+SGQAR  HRA
Sbjct: 717 LLNKKIRKLSSLTGHRQSEEKRKPVVDKLKGPVIACIPLTIVFSRINEALSGQARSTHRA 776

Query: 767 PPTSNP 772
             T+NP
Sbjct: 777 VSTTNP 782


>Medtr8g015580.2 | tudor/PWWP/MBT superfamily protein | HC |
           chr8:5106185-5100906 | 20130731
          Length = 782

 Score =  701 bits (1810), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/786 (52%), Positives = 481/786 (61%), Gaps = 29/786 (3%)

Query: 7   QMGSSGE---NGIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGR 63
           +MGSS E   NGI+AS GGLVWVRRRNGSWWPGRIM L ELS+  LVSPRSGTPVKLLGR
Sbjct: 6   EMGSSEESNINGINASVGGLVWVRRRNGSWWPGRIMSLDELSDGCLVSPRSGTPVKLLGR 65

Query: 64  EDASVDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELES 123
           +DASVDWYNLE+SKRVK FRC EY + IE               YARREDAILHALELES
Sbjct: 66  DDASVDWYNLEKSKRVKAFRCREYAEAIEKAKASAAGLGKKAVKYARREDAILHALELES 125

Query: 124 ARLGKESLNFCSRSDTLGGEPVGLAGESPIISCSGXXXXXXXXXXXXXXXXXXXXX-XXH 182
           A L K  L  CSRSD    E    AGE P++S S                          
Sbjct: 126 AHLDKAPLPLCSRSDKSDSEHGEPAGELPVMSNSSDDGNEDVIDDLSDSEDNSNSAPELS 185

Query: 183 QSEISLEEPNQNGSSKMQSLQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVPKTKVLG 242
           QS IS EEPN NGS K+ S+QGRRRRTPNDSEDDGTEGVKRM+GLEDLG GVV   K  G
Sbjct: 186 QSGISFEEPNHNGSLKIPSMQGRRRRTPNDSEDDGTEGVKRMKGLEDLGNGVVSNRKGQG 245

Query: 243 AGTPEIAQQDGALSGNSNTGNFLVNGTFVNGGKGHFSTLKRRRTQVANVHESLKRKNRRR 302
            G  EIAQ   A   +S TGN L NGT VN GK  +S+LKR+R+QV NVHE LKRKNRRR
Sbjct: 246 LGPTEIAQHVSASLNDSMTGNGLANGTSVNVGK-TYSSLKRKRSQVGNVHELLKRKNRRR 304

Query: 303 PLTKVLESTAMVSVPAICDGLTSSISSPSLGVTYSSNPSTLYSNELQERSPLANHVFVST 362
            LTKVLESTAMVSVP  CD    S SSP  G+T         ++  +      N+   + 
Sbjct: 305 TLTKVLESTAMVSVPVTCDQPPGSSSSPPCGITDVKISGLDSTDSKKPSGKEINNSDSAA 364

Query: 363 EAAFENGTSADIQEDGRETSQTNYTV-KENEASGISGQIWNDFSDKLFDVPFMKVGREER 421
           E A ENGTS  + + G +  Q N+ + KENE + I G +  D SD LFDVP + V  EE+
Sbjct: 365 ETACENGTSLTVHDQGSDIPQINHRIKKENETTEIPGLVGYDSSDILFDVPLVGVLEEEK 424

Query: 422 PLTGFSPVLASCSSGKPGVDVLGQQSRHLGQSEALSARNEGYS-TGFTSSIADHNITDLR 480
           P  G SP L SCS G P V  L Q+S    QSEA + RN   +  G TSS   H+I    
Sbjct: 425 PSPGISPTLVSCSFGMPEVSALEQKSCEASQSEAFALRNGSKNEAGCTSSAVGHDIVSDG 484

Query: 481 AEIGSSEWLSKGKRNSRHAR---KEALRTHVDMYDKFSTHLAGVENSDGYSQGTG--QKA 535
           AE  SS+W SKGKRN RH     K+  R ++ M  +   +L G  NSDG  +G G  QK 
Sbjct: 485 AEKDSSKWQSKGKRNLRHKSKNGKQVSRKYIGMDGESDAYLTGTRNSDGLCEGAGQKQKI 544

Query: 536 DWNITGAPVASYNGTSQARCKQVAEGELGGFRDLSKRIKGTRDVKLLPDRSLTPQVSLPY 595
           DWN TG   AS N TSQ  CK VAEG++ GFRDLSK I+GT         +  PQ SLPY
Sbjct: 545 DWNGTGVSNASNNCTSQINCKTVAEGQVEGFRDLSKHIEGT--------TAEPPQRSLPY 596

Query: 596 RQPRLPLAPNHPMLDCPGRNSCSDGSLYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGH 655
           RQ R  +   +   D PGRN  SDG+LYDVK+E+KSSYRPQHVPLVSLASKL+ +AFIGH
Sbjct: 597 RQSRFAINSRYETADFPGRNCSSDGTLYDVKLEVKSSYRPQHVPLVSLASKLSGKAFIGH 656

Query: 656 PLTVEVMPDGQCDDMMRMYGPGLEGGDTSGVVKPR---IKPXXXXXXXXXXXXXXXXXXX 712
           PLTVEV+ DG CD M+      +E  D   VVKP+    +                    
Sbjct: 657 PLTVEVLEDGHCDKMLSGLRRDVEVDDIDCVVKPKPVTTRRPKRSSHFSRRKSSKSKKSG 716

Query: 713 XXXXXTRKLSSLTGQKKSERK------KVGTPVVACIPLSVVFSRINEAVSGQARPAHRA 766
                 RKLSSLTG ++SE K      K+  PV+ACIPL++VFSRINEA+SGQAR  HRA
Sbjct: 717 LLNKKIRKLSSLTGHRQSEEKRKPVVDKLKGPVIACIPLTIVFSRINEALSGQARSTHRA 776

Query: 767 PPTSNP 772
             T+NP
Sbjct: 777 VSTTNP 782


>Medtr5g007980.1 | tudor/PWWP/MBT superfamily protein | HC |
           chr5:1623285-1617399 | 20130731
          Length = 621

 Score =  160 bits (405), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 83/149 (55%), Positives = 93/149 (62%), Gaps = 8/149 (5%)

Query: 8   MGSSGENGIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGREDAS 67
           M   G    D + G LVWVRRRNGSWWPG+I+   +L+ S L SPRSGTPVKLLGREDAS
Sbjct: 1   MDGEGLGAEDCAVGSLVWVRRRNGSWWPGQILDPDDLAASHLTSPRSGTPVKLLGREDAS 60

Query: 68  VDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESARLG 127
           VDWYNLE+SKRVKPFRCGE+D  IE               YARREDAILHALELE   L 
Sbjct: 61  VDWYNLEKSKRVKPFRCGEFDASIERAETALGMPLKKREKYARREDAILHALELERQMLR 120

Query: 128 KESLNFCSRSDTLGGEPVGLAGESPIISC 156
           K+        D LG   +G A  +    C
Sbjct: 121 KQ--------DKLGSGQIGAAFRAKRSKC 141



 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 35/50 (70%)

Query: 622 LYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCDDMM 671
           L DV +++++SY  + VP+VS+ SKL+  + IG P+ +EV+ DG  D++ 
Sbjct: 390 LVDVDLKVQASYPKESVPIVSITSKLDGSSIIGRPIQIEVLKDGSTDNLF 439


>Medtr4g077550.1 | tudor/PWWP/MBT superfamily protein | HC |
           chr4:29681931-29685319 | 20130731
          Length = 736

 Score =  152 bits (383), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/115 (64%), Positives = 83/115 (72%), Gaps = 1/115 (0%)

Query: 16  IDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSP-RSGTPVKLLGREDASVDWYNLE 74
           +D   G +VWVRRRNGSWWPG+I+G  + S S L SP RSGTPVKLLGREDASVDWYNLE
Sbjct: 1   MDCGVGSIVWVRRRNGSWWPGQIIGPDDHSTSHLTSPPRSGTPVKLLGREDASVDWYNLE 60

Query: 75  RSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESARLGKE 129
           +SKRVK FRCGE+DD IE               YARREDAILHALELE   + K+
Sbjct: 61  KSKRVKAFRCGEFDDYIEKIEASHEMPLKKREKYARREDAILHALELERELVKKQ 115



 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 6/65 (9%)

Query: 622 LYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCD------DMMRMYG 675
           L +V + +++ YR + VP++SL SKL+ +A IGHP+ VEV+ DG  D      D     G
Sbjct: 511 LINVDVRVQAGYRKEPVPIISLMSKLDGKAIIGHPIQVEVLKDGSSDTFFSAIDDFSNEG 570

Query: 676 PGLEG 680
            G+EG
Sbjct: 571 IGIEG 575