Miyakogusa Predicted Gene

Lj3g3v0290160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0290160.1 tr|G7IHY7|G7IHY7_MEDTR IQ domain-containing
protein OS=Medicago truncatula GN=MTR_2g100740 PE=4
SV=1,52.68,1e-18,seg,NULL; IQ,IQ motif, EF-hand binding
site,CUFF.40438.1
         (100 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g100740.1 | IQ calmodulin-binding motif protein | HC | chr...    71   2e-13
Medtr8g014580.2 | IQ calmodulin-binding motif protein | HC | chr...    46   7e-06
Medtr8g014580.1 | IQ calmodulin-binding motif protein | HC | chr...    46   7e-06

>Medtr2g100740.1 | IQ calmodulin-binding motif protein | HC |
           chr2:43315630-43314014 | 20130731
          Length = 355

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 13/112 (11%)

Query: 1   MGKATRWXXXXXXXXXXXXHCDKPGSLAL---EKKRSRKDD--VRH-SNVVAYDNAWLRT 54
           MGKA+RW            + +K G L L   EKKRS K+D  + H ++  A+D+AW ++
Sbjct: 1   MGKASRWLKGLFGMKKEKEYSNKSGPLVLDKKEKKRSGKNDNHIDHQTSAPAFDDAWYKS 60

Query: 55  Y----EKEVEKNKQATLVKSFSH--GRCTLSSGSRERWWAALKIQSFFKGYL 100
           Y    +K+ E NK A  V+S SH  GR +L  GS+E   AA+KIQ+FF+GYL
Sbjct: 61  YVAEKQKQNEHNKNAIFVRSLSHGSGRKSLLFGSKE-MLAAVKIQTFFRGYL 111


>Medtr8g014580.2 | IQ calmodulin-binding motif protein | HC |
           chr8:4607760-4610787 | 20130731
          Length = 414

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 63/141 (44%), Gaps = 42/141 (29%)

Query: 1   MGKATRWXXX---XXXXXXXXXHCD-KPGSLALEKKRSRKD----------DVRHSNVV- 45
           MGKA+RW               H D   GSL  + K+ ++           +V   N+  
Sbjct: 1   MGKASRWFKSLLGNKKKEKEKDHSDINSGSLTPDIKKEKRRWSFAKQGKNVEVEPPNITP 60

Query: 46  --AYDNAWLRTY--EKEVEKNKQATLVKSF----------------------SHGRCTLS 79
             + D +WLR+Y  + E ++NK A  V +                       S GR TL 
Sbjct: 61  TSSSDGSWLRSYIADTENQQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTLF 120

Query: 80  SGSRERWWAALKIQSFFKGYL 100
           SGSRE+W AA+KIQ+FF+GYL
Sbjct: 121 SGSREKW-AAVKIQTFFRGYL 140


>Medtr8g014580.1 | IQ calmodulin-binding motif protein | HC |
           chr8:4608555-4610787 | 20130731
          Length = 414

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 63/141 (44%), Gaps = 42/141 (29%)

Query: 1   MGKATRWXXX---XXXXXXXXXHCD-KPGSLALEKKRSRKD----------DVRHSNVV- 45
           MGKA+RW               H D   GSL  + K+ ++           +V   N+  
Sbjct: 1   MGKASRWFKSLLGNKKKEKEKDHSDINSGSLTPDIKKEKRRWSFAKQGKNVEVEPPNITP 60

Query: 46  --AYDNAWLRTY--EKEVEKNKQATLVKSF----------------------SHGRCTLS 79
             + D +WLR+Y  + E ++NK A  V +                       S GR TL 
Sbjct: 61  TSSSDGSWLRSYIADTENQQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTLF 120

Query: 80  SGSRERWWAALKIQSFFKGYL 100
           SGSRE+W AA+KIQ+FF+GYL
Sbjct: 121 SGSREKW-AAVKIQTFFRGYL 140