Miyakogusa Predicted Gene

Lj3g3v0270540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0270540.1 Non Characterized Hit- tr|E9AFY2|E9AFY2_LEIMA
Putative uncharacterized protein OS=Leishmania major
G,27.27,4e-18,RNase_Zc3h12a,Ribonuclease Zc3h12a-like; seg,NULL;
SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,Mitocho,CUFF.40398.1
         (296 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g101360.1 | proteinaceous RNase P | HC | chr2:43577817-435...   432   e-121
Medtr2g101360.2 | proteinaceous RNase P | HC | chr2:43577836-435...   432   e-121
Medtr8g103380.2 | Zc3h12a-like ribonuclease NYN domain protein |...   286   1e-77
Medtr8g103380.4 | Zc3h12a-like ribonuclease NYN domain protein |...   286   1e-77
Medtr8g103380.6 | Zc3h12a-like ribonuclease NYN domain protein |...   286   1e-77
Medtr8g103380.3 | Zc3h12a-like ribonuclease NYN domain protein |...   286   1e-77
Medtr8g103380.5 | Zc3h12a-like ribonuclease NYN domain protein |...   286   1e-77
Medtr8g103380.1 | Zc3h12a-like ribonuclease NYN domain protein |...   286   1e-77

>Medtr2g101360.1 | proteinaceous RNase P | HC |
           chr2:43577817-43582278 | 20130731
          Length = 558

 Score =  432 bits (1110), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 201/276 (72%), Positives = 234/276 (84%), Gaps = 1/276 (0%)

Query: 1   MKVGEENWDADKVRDGIVRXXXXXXXXXXXXXXXXKVVKTHVNEDGMCLSCGEKLVSIDL 60
           MK+G+  WD +++R+G VR                KVVKT+V+EDGMCLSC EKLVSID+
Sbjct: 281 MKIGKREWDDEEIREGFVRGGGGWHGQGWLGSGEWKVVKTNVDEDGMCLSCSEKLVSIDI 340

Query: 61  DPKETENFATSLSKLACQRETQSNFNNFQKWLKQHGPFDAVVDGANVGLANQHNFSFSQL 120
           DPKETENFA SLSKLA +++ ++NFN+FQKWL+++GPFDAVVDGANVGLAN   FSF QL
Sbjct: 341 DPKETENFAASLSKLAHEKQPKANFNHFQKWLEKNGPFDAVVDGANVGLANIAEFSFKQL 400

Query: 121 NNVVKQLRQISPSKRLPLIILHVSRVTGGPAQNPNNKRLLEHWRENGALYATPQGSNDDW 180
           + VV+QLRQ+SPSKRLPLIILHV+RVTGGPAQNPNNKRL+E+W++NG LYATP GSNDDW
Sbjct: 401 DYVVRQLRQLSPSKRLPLIILHVNRVTGGPAQNPNNKRLIENWKKNGVLYATPHGSNDDW 460

Query: 181 FWLYAAVSCKCLLLTNDEMRDHLFQLLGSNFFPRWKEKHQIRVSASAGRVSLVMPPRYSI 240
           +WLYAAVSCKCLLLTNDEMRDHLFQLLGS+FFPRWKEKHQ+RVS S    SLV+PPRYS+
Sbjct: 461 YWLYAAVSCKCLLLTNDEMRDHLFQLLGSSFFPRWKEKHQVRVSVSTRGASLVLPPRYSL 520

Query: 241 VIQESANGSWHVPTVTSDDDHEIPRKWLCATRSSNK 276
           VIQESANGSWHVPTV SD+  +IPRKWLC TRS  K
Sbjct: 521 VIQESANGSWHVPTVVSDEP-DIPRKWLCVTRSRKK 555


>Medtr2g101360.2 | proteinaceous RNase P | HC |
           chr2:43577836-43582278 | 20130731
          Length = 558

 Score =  432 bits (1110), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 201/276 (72%), Positives = 234/276 (84%), Gaps = 1/276 (0%)

Query: 1   MKVGEENWDADKVRDGIVRXXXXXXXXXXXXXXXXKVVKTHVNEDGMCLSCGEKLVSIDL 60
           MK+G+  WD +++R+G VR                KVVKT+V+EDGMCLSC EKLVSID+
Sbjct: 281 MKIGKREWDDEEIREGFVRGGGGWHGQGWLGSGEWKVVKTNVDEDGMCLSCSEKLVSIDI 340

Query: 61  DPKETENFATSLSKLACQRETQSNFNNFQKWLKQHGPFDAVVDGANVGLANQHNFSFSQL 120
           DPKETENFA SLSKLA +++ ++NFN+FQKWL+++GPFDAVVDGANVGLAN   FSF QL
Sbjct: 341 DPKETENFAASLSKLAHEKQPKANFNHFQKWLEKNGPFDAVVDGANVGLANIAEFSFKQL 400

Query: 121 NNVVKQLRQISPSKRLPLIILHVSRVTGGPAQNPNNKRLLEHWRENGALYATPQGSNDDW 180
           + VV+QLRQ+SPSKRLPLIILHV+RVTGGPAQNPNNKRL+E+W++NG LYATP GSNDDW
Sbjct: 401 DYVVRQLRQLSPSKRLPLIILHVNRVTGGPAQNPNNKRLIENWKKNGVLYATPHGSNDDW 460

Query: 181 FWLYAAVSCKCLLLTNDEMRDHLFQLLGSNFFPRWKEKHQIRVSASAGRVSLVMPPRYSI 240
           +WLYAAVSCKCLLLTNDEMRDHLFQLLGS+FFPRWKEKHQ+RVS S    SLV+PPRYS+
Sbjct: 461 YWLYAAVSCKCLLLTNDEMRDHLFQLLGSSFFPRWKEKHQVRVSVSTRGASLVLPPRYSL 520

Query: 241 VIQESANGSWHVPTVTSDDDHEIPRKWLCATRSSNK 276
           VIQESANGSWHVPTV SD+  +IPRKWLC TRS  K
Sbjct: 521 VIQESANGSWHVPTVVSDEP-DIPRKWLCVTRSRKK 555


>Medtr8g103380.2 | Zc3h12a-like ribonuclease NYN domain protein | HC
           | chr8:43497827-43502141 | 20130731
          Length = 495

 Score =  286 bits (733), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 135/273 (49%), Positives = 178/273 (65%), Gaps = 1/273 (0%)

Query: 1   MKVGEENWDADKVRDGIVRXXXXXXXXXXXXXXXXKVVKTHVNEDGMCLSCGEKLVSIDL 60
           +KVG+  WD   +   +                  +V++T V +DGMC  CG +L +IDL
Sbjct: 163 LKVGKRKWDNGLIMKAMQNNGGGWHGTGWLGKGKWQVLQTSVRKDGMCKCCGVQLATIDL 222

Query: 61  DPKETENFATSLSKLACQRETQSNFNNFQKWLKQHGPFDAVVDGANVGLANQHNFSFSQL 120
           DP ETENFA S++ +A   E  SNF  FQKWL  +GPF+AV+D ANVGL +Q  F  S++
Sbjct: 223 DPVETENFAKSVASIAISNEKNSNFQTFQKWLDYYGPFEAVIDAANVGLYSQGKFMPSKI 282

Query: 121 NNVVKQLRQISPSKRLPLIILHVSRVTGGPAQNPNNKRLLEHWRENGALYATPQGSNDDW 180
           N VV +LRQ  PSK+ PLI+LH  R+ G     P NK L++ W     LYATP GSNDDW
Sbjct: 283 NAVVNELRQKLPSKKFPLIVLHHRRIKGDKRDVPINKALVDRWNNANVLYATPTGSNDDW 342

Query: 181 FWLYAAVSCKCLLLTNDEMRDHLFQLLGSNFFPRWKEKHQIRVSASAGRVSLVMPPRYSI 240
           +WLYAA+  KCLL++NDEMRDHLFQLLG++FFP+WKE+HQ+R   S   +   MPP  S+
Sbjct: 343 YWLYAAIKFKCLLVSNDEMRDHLFQLLGNDFFPKWKERHQVRFGFSDAGLEFYMPPPCSV 402

Query: 241 VIQESANGSWHVPTVTSDDDHEIPRKWLCATRS 273
           VIQES  G WH+P + ++ + E  R+WLC TR+
Sbjct: 403 VIQESEEGHWHIP-IEAELNDEAERRWLCITRA 434


>Medtr8g103380.4 | Zc3h12a-like ribonuclease NYN domain protein | HC
           | chr8:43497831-43502141 | 20130731
          Length = 450

 Score =  286 bits (733), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 135/273 (49%), Positives = 178/273 (65%), Gaps = 1/273 (0%)

Query: 1   MKVGEENWDADKVRDGIVRXXXXXXXXXXXXXXXXKVVKTHVNEDGMCLSCGEKLVSIDL 60
           +KVG+  WD   +   +                  +V++T V +DGMC  CG +L +IDL
Sbjct: 163 LKVGKRKWDNGLIMKAMQNNGGGWHGTGWLGKGKWQVLQTSVRKDGMCKCCGVQLATIDL 222

Query: 61  DPKETENFATSLSKLACQRETQSNFNNFQKWLKQHGPFDAVVDGANVGLANQHNFSFSQL 120
           DP ETENFA S++ +A   E  SNF  FQKWL  +GPF+AV+D ANVGL +Q  F  S++
Sbjct: 223 DPVETENFAKSVASIAISNEKNSNFQTFQKWLDYYGPFEAVIDAANVGLYSQGKFMPSKI 282

Query: 121 NNVVKQLRQISPSKRLPLIILHVSRVTGGPAQNPNNKRLLEHWRENGALYATPQGSNDDW 180
           N VV +LRQ  PSK+ PLI+LH  R+ G     P NK L++ W     LYATP GSNDDW
Sbjct: 283 NAVVNELRQKLPSKKFPLIVLHHRRIKGDKRDVPINKALVDRWNNANVLYATPTGSNDDW 342

Query: 181 FWLYAAVSCKCLLLTNDEMRDHLFQLLGSNFFPRWKEKHQIRVSASAGRVSLVMPPRYSI 240
           +WLYAA+  KCLL++NDEMRDHLFQLLG++FFP+WKE+HQ+R   S   +   MPP  S+
Sbjct: 343 YWLYAAIKFKCLLVSNDEMRDHLFQLLGNDFFPKWKERHQVRFGFSDAGLEFYMPPPCSV 402

Query: 241 VIQESANGSWHVPTVTSDDDHEIPRKWLCATRS 273
           VIQES  G WH+P + ++ + E  R+WLC TR+
Sbjct: 403 VIQESEEGHWHIP-IEAELNDEAERRWLCITRA 434


>Medtr8g103380.6 | Zc3h12a-like ribonuclease NYN domain protein | HC
           | chr8:43497831-43502141 | 20130731
          Length = 450

 Score =  286 bits (733), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 135/273 (49%), Positives = 178/273 (65%), Gaps = 1/273 (0%)

Query: 1   MKVGEENWDADKVRDGIVRXXXXXXXXXXXXXXXXKVVKTHVNEDGMCLSCGEKLVSIDL 60
           +KVG+  WD   +   +                  +V++T V +DGMC  CG +L +IDL
Sbjct: 163 LKVGKRKWDNGLIMKAMQNNGGGWHGTGWLGKGKWQVLQTSVRKDGMCKCCGVQLATIDL 222

Query: 61  DPKETENFATSLSKLACQRETQSNFNNFQKWLKQHGPFDAVVDGANVGLANQHNFSFSQL 120
           DP ETENFA S++ +A   E  SNF  FQKWL  +GPF+AV+D ANVGL +Q  F  S++
Sbjct: 223 DPVETENFAKSVASIAISNEKNSNFQTFQKWLDYYGPFEAVIDAANVGLYSQGKFMPSKI 282

Query: 121 NNVVKQLRQISPSKRLPLIILHVSRVTGGPAQNPNNKRLLEHWRENGALYATPQGSNDDW 180
           N VV +LRQ  PSK+ PLI+LH  R+ G     P NK L++ W     LYATP GSNDDW
Sbjct: 283 NAVVNELRQKLPSKKFPLIVLHHRRIKGDKRDVPINKALVDRWNNANVLYATPTGSNDDW 342

Query: 181 FWLYAAVSCKCLLLTNDEMRDHLFQLLGSNFFPRWKEKHQIRVSASAGRVSLVMPPRYSI 240
           +WLYAA+  KCLL++NDEMRDHLFQLLG++FFP+WKE+HQ+R   S   +   MPP  S+
Sbjct: 343 YWLYAAIKFKCLLVSNDEMRDHLFQLLGNDFFPKWKERHQVRFGFSDAGLEFYMPPPCSV 402

Query: 241 VIQESANGSWHVPTVTSDDDHEIPRKWLCATRS 273
           VIQES  G WH+P + ++ + E  R+WLC TR+
Sbjct: 403 VIQESEEGHWHIP-IEAELNDEAERRWLCITRA 434


>Medtr8g103380.3 | Zc3h12a-like ribonuclease NYN domain protein | HC
           | chr8:43497831-43502141 | 20130731
          Length = 450

 Score =  286 bits (733), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 135/273 (49%), Positives = 178/273 (65%), Gaps = 1/273 (0%)

Query: 1   MKVGEENWDADKVRDGIVRXXXXXXXXXXXXXXXXKVVKTHVNEDGMCLSCGEKLVSIDL 60
           +KVG+  WD   +   +                  +V++T V +DGMC  CG +L +IDL
Sbjct: 163 LKVGKRKWDNGLIMKAMQNNGGGWHGTGWLGKGKWQVLQTSVRKDGMCKCCGVQLATIDL 222

Query: 61  DPKETENFATSLSKLACQRETQSNFNNFQKWLKQHGPFDAVVDGANVGLANQHNFSFSQL 120
           DP ETENFA S++ +A   E  SNF  FQKWL  +GPF+AV+D ANVGL +Q  F  S++
Sbjct: 223 DPVETENFAKSVASIAISNEKNSNFQTFQKWLDYYGPFEAVIDAANVGLYSQGKFMPSKI 282

Query: 121 NNVVKQLRQISPSKRLPLIILHVSRVTGGPAQNPNNKRLLEHWRENGALYATPQGSNDDW 180
           N VV +LRQ  PSK+ PLI+LH  R+ G     P NK L++ W     LYATP GSNDDW
Sbjct: 283 NAVVNELRQKLPSKKFPLIVLHHRRIKGDKRDVPINKALVDRWNNANVLYATPTGSNDDW 342

Query: 181 FWLYAAVSCKCLLLTNDEMRDHLFQLLGSNFFPRWKEKHQIRVSASAGRVSLVMPPRYSI 240
           +WLYAA+  KCLL++NDEMRDHLFQLLG++FFP+WKE+HQ+R   S   +   MPP  S+
Sbjct: 343 YWLYAAIKFKCLLVSNDEMRDHLFQLLGNDFFPKWKERHQVRFGFSDAGLEFYMPPPCSV 402

Query: 241 VIQESANGSWHVPTVTSDDDHEIPRKWLCATRS 273
           VIQES  G WH+P + ++ + E  R+WLC TR+
Sbjct: 403 VIQESEEGHWHIP-IEAELNDEAERRWLCITRA 434


>Medtr8g103380.5 | Zc3h12a-like ribonuclease NYN domain protein | HC
           | chr8:43497831-43502141 | 20130731
          Length = 450

 Score =  286 bits (733), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 135/273 (49%), Positives = 178/273 (65%), Gaps = 1/273 (0%)

Query: 1   MKVGEENWDADKVRDGIVRXXXXXXXXXXXXXXXXKVVKTHVNEDGMCLSCGEKLVSIDL 60
           +KVG+  WD   +   +                  +V++T V +DGMC  CG +L +IDL
Sbjct: 163 LKVGKRKWDNGLIMKAMQNNGGGWHGTGWLGKGKWQVLQTSVRKDGMCKCCGVQLATIDL 222

Query: 61  DPKETENFATSLSKLACQRETQSNFNNFQKWLKQHGPFDAVVDGANVGLANQHNFSFSQL 120
           DP ETENFA S++ +A   E  SNF  FQKWL  +GPF+AV+D ANVGL +Q  F  S++
Sbjct: 223 DPVETENFAKSVASIAISNEKNSNFQTFQKWLDYYGPFEAVIDAANVGLYSQGKFMPSKI 282

Query: 121 NNVVKQLRQISPSKRLPLIILHVSRVTGGPAQNPNNKRLLEHWRENGALYATPQGSNDDW 180
           N VV +LRQ  PSK+ PLI+LH  R+ G     P NK L++ W     LYATP GSNDDW
Sbjct: 283 NAVVNELRQKLPSKKFPLIVLHHRRIKGDKRDVPINKALVDRWNNANVLYATPTGSNDDW 342

Query: 181 FWLYAAVSCKCLLLTNDEMRDHLFQLLGSNFFPRWKEKHQIRVSASAGRVSLVMPPRYSI 240
           +WLYAA+  KCLL++NDEMRDHLFQLLG++FFP+WKE+HQ+R   S   +   MPP  S+
Sbjct: 343 YWLYAAIKFKCLLVSNDEMRDHLFQLLGNDFFPKWKERHQVRFGFSDAGLEFYMPPPCSV 402

Query: 241 VIQESANGSWHVPTVTSDDDHEIPRKWLCATRS 273
           VIQES  G WH+P + ++ + E  R+WLC TR+
Sbjct: 403 VIQESEEGHWHIP-IEAELNDEAERRWLCITRA 434


>Medtr8g103380.1 | Zc3h12a-like ribonuclease NYN domain protein | HC
           | chr8:43497972-43501688 | 20130731
          Length = 668

 Score =  286 bits (732), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 135/273 (49%), Positives = 178/273 (65%), Gaps = 1/273 (0%)

Query: 1   MKVGEENWDADKVRDGIVRXXXXXXXXXXXXXXXXKVVKTHVNEDGMCLSCGEKLVSIDL 60
           +KVG+  WD   +   +                  +V++T V +DGMC  CG +L +IDL
Sbjct: 336 LKVGKRKWDNGLIMKAMQNNGGGWHGTGWLGKGKWQVLQTSVRKDGMCKCCGVQLATIDL 395

Query: 61  DPKETENFATSLSKLACQRETQSNFNNFQKWLKQHGPFDAVVDGANVGLANQHNFSFSQL 120
           DP ETENFA S++ +A   E  SNF  FQKWL  +GPF+AV+D ANVGL +Q  F  S++
Sbjct: 396 DPVETENFAKSVASIAISNEKNSNFQTFQKWLDYYGPFEAVIDAANVGLYSQGKFMPSKI 455

Query: 121 NNVVKQLRQISPSKRLPLIILHVSRVTGGPAQNPNNKRLLEHWRENGALYATPQGSNDDW 180
           N VV +LRQ  PSK+ PLI+LH  R+ G     P NK L++ W     LYATP GSNDDW
Sbjct: 456 NAVVNELRQKLPSKKFPLIVLHHRRIKGDKRDVPINKALVDRWNNANVLYATPTGSNDDW 515

Query: 181 FWLYAAVSCKCLLLTNDEMRDHLFQLLGSNFFPRWKEKHQIRVSASAGRVSLVMPPRYSI 240
           +WLYAA+  KCLL++NDEMRDHLFQLLG++FFP+WKE+HQ+R   S   +   MPP  S+
Sbjct: 516 YWLYAAIKFKCLLVSNDEMRDHLFQLLGNDFFPKWKERHQVRFGFSDAGLEFYMPPPCSV 575

Query: 241 VIQESANGSWHVPTVTSDDDHEIPRKWLCATRS 273
           VIQES  G WH+P + ++ + E  R+WLC TR+
Sbjct: 576 VIQESEEGHWHIP-IEAELNDEAERRWLCITRA 607