Miyakogusa Predicted Gene
- Lj3g3v0260470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0260470.1 Non Characterized Hit- tr|K4BV49|K4BV49_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,38.02,2e-19,F-BOX AND WD40 DOMAIN PROTEIN,NULL; WD40
repeat-like,WD40-repeat-containing domain;
WD_REPEATS_2,WD4,CUFF.40830.1
(122 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g101410.1 | F-box and wd40 domain protein, putative | HC |... 227 2e-60
Medtr3g110185.1 | lactoylglutathione lyase | HC | chr3:51187554-... 109 5e-25
Medtr5g018520.1 | transducin/WD40 repeat protein | HC | chr5:691... 102 6e-23
Medtr4g068457.1 | transducin/WD40 repeat protein | HC | chr4:257... 96 7e-21
Medtr1g021590.1 | transducin/WD40 repeat protein | HC | chr1:648... 96 7e-21
Medtr8g089650.1 | transducin/WD40 repeat protein | HC | chr8:373... 95 1e-20
Medtr5g035980.1 | transducin/WD40 repeat protein | HC | chr5:156... 91 2e-19
Medtr4g104410.1 | transducin/WD40 repeat protein | HC | chr4:432... 88 2e-18
Medtr3g078380.1 | myosin heavy chain kinase B-like protein | HC ... 78 2e-15
Medtr2g060070.1 | transducin/WD40 repeat protein | HC | chr2:247... 76 7e-15
Medtr4g106480.1 | myosin heavy chain kinase B-like protein | HC ... 71 2e-13
Medtr4g069090.1 | phospholipase A-2-activating protein | HC | ch... 56 8e-09
Medtr4g119620.1 | transducin/WD40 repeat protein | HC | chr4:495... 54 4e-08
Medtr8g028700.2 | F-box and WD40 domain protein, putative | HC |... 52 9e-08
Medtr8g028700.1 | F-box and WD40 domain protein, putative | HC |... 52 9e-08
Medtr8g032850.1 | F-box and WD40 domain protein, putative | LC |... 50 4e-07
Medtr4g105700.1 | transducin/WD40 repeat protein | HC | chr4:438... 50 6e-07
Medtr6g465150.1 | zinc finger CCCH domain protein | HC | chr6:23... 48 2e-06
Medtr1g087120.1 | WD40/YVTN repeat containing domain; bromodomai... 48 2e-06
Medtr2g102277.2 | coatomer subunit beta-like protein | HC | chr2... 47 3e-06
Medtr2g102277.3 | coatomer subunit beta-like protein | HC | chr2... 47 3e-06
Medtr2g102277.4 | coatomer subunit beta-like protein | HC | chr2... 47 3e-06
Medtr2g102277.1 | coatomer subunit beta-like protein | HC | chr2... 47 3e-06
Medtr4g011950.1 | coatomer subunit beta-like protein | HC | chr4... 47 4e-06
>Medtr2g101410.1 | F-box and wd40 domain protein, putative | HC |
chr2:43602566-43604279 | 20130731
Length = 436
Score = 227 bits (579), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 106/122 (86%), Positives = 115/122 (94%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVL 60
MKHK LITSMAINTAEDI+YTASLDKTVKVWRISDLKC ETIKAH +PIN +I +DDGVL
Sbjct: 185 MKHKRLITSMAINTAEDIIYTASLDKTVKVWRISDLKCIETIKAHPDPINDMIVSDDGVL 244
Query: 61 YTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHY 120
YTASDDAT++VWRRNFCSHDQPHSLTVTLHAKYSPVKALTLT + GG+LYGGC+DGYIHY
Sbjct: 245 YTASDDATIKVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTNNDGGILYGGCTDGYIHY 304
Query: 121 WL 122
WL
Sbjct: 305 WL 306
>Medtr3g110185.1 | lactoylglutathione lyase | HC |
chr3:51187554-51183426 | 20130731
Length = 821
Score = 109 bits (273), Expect = 5e-25, Method: Composition-based stats.
Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 4/122 (3%)
Query: 2 KHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIA-ADDGVL 60
KHK L++ MA +E +LYT S D+TVK WRISD C ++ AH + +NAI+ DDG +
Sbjct: 192 KHKDLVSCMAYYHSEGLLYTGSHDRTVKAWRISDRNCVDSFLAHEDHVNAILVNQDDGCV 251
Query: 61 YTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPD-GGGVLYGGCSDGYIH 119
+T S D +V++WRR + + H+LT+TL ++SPV L L+ LY G SDG I+
Sbjct: 252 FTCSSDGSVKIWRRVYT--ENSHTLTMTLKFQHSPVNTLALSSSFNHCFLYSGSSDGMIN 309
Query: 120 YW 121
+W
Sbjct: 310 FW 311
>Medtr5g018520.1 | transducin/WD40 repeat protein | HC |
chr5:6918027-6916505 | 20130731
Length = 457
Score = 102 bits (255), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVL 60
+KH I+ +++ ++Y+AS DKT KVWR S+ KC E++ AH + +NA++ DG++
Sbjct: 204 IKHYDAISCLSLTEDLSLIYSASWDKTFKVWRASNYKCLESVTAHDDAVNALVVGFDGLV 263
Query: 61 YTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHY 120
+T S D TV++WRR H + TL + V ALTL D G LY G SDG ++Y
Sbjct: 264 FTGSADGTVKIWRREMQGKGTKHFFSQTLLKQECAVTALTLNSD-GTFLYAGSSDGLVNY 322
Query: 121 WL 122
W+
Sbjct: 323 WV 324
>Medtr4g068457.1 | transducin/WD40 repeat protein | HC |
chr4:25703784-25702268 | 20130731
Length = 498
Score = 95.9 bits (237), Expect = 7e-21, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVL 60
+KH ++S++++ E +LY+ S DKT+KVWR++D KC E+I AH + +NA++AA +
Sbjct: 235 VKHFDAVSSLSLDQEEGLLYSGSWDKTLKVWRVTDFKCMESIIAHDDAVNAVVAAFQTYV 294
Query: 61 YTASDDATVRVWRRNFCSHDQ--PHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYI 118
+T S D TV++WRR+ + H L L + + V ALT+ D ++Y G SDG +
Sbjct: 295 FTGSADGTVKMWRRDTDGKGKKTKHVLERILLKQENAVTALTVN-DSSTIIYCGSSDGLV 353
Query: 119 HYW 121
++W
Sbjct: 354 NFW 356
>Medtr1g021590.1 | transducin/WD40 repeat protein | HC |
chr1:6486978-6485061 | 20130731
Length = 470
Score = 95.9 bits (237), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVL 60
+KH ++ ++++ + LY+AS D+TVKVWRI+D KC E+I +H + +NA++ +DG++
Sbjct: 216 IKHSDAVSCLSLSPDKTYLYSASWDRTVKVWRIADSKCLESITSHEDAVNAVVCGNDGIV 275
Query: 61 YTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHY 120
++ S D TV+VWRR H + L + V AL + G ++Y G SDG +++
Sbjct: 276 FSGSADGTVKVWRREPRGKATKHVMVKQLLKQECAVTALAID-STGSMVYCGASDGLVNF 334
Query: 121 W 121
W
Sbjct: 335 W 335
>Medtr8g089650.1 | transducin/WD40 repeat protein | HC |
chr8:37302350-37304422 | 20130731
Length = 447
Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 73/121 (60%), Gaps = 5/121 (4%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVL 60
++H +T +A++ ++Y+ S DKT+K+WRISDL+C E++KAH + +NA+ ++DG +
Sbjct: 209 IEHADAVTDLAVSNG--VIYSVSWDKTLKIWRISDLRCLESLKAHEDAVNAVAVSNDGTV 266
Query: 61 YTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHY 120
YT S D +RVW + ++ H L TL S V AL L D G VL+ G D I
Sbjct: 267 YTGSSDKRIRVWAKPV--GEKKHVLVATLEKHKSAVNALALN-DDGSVLFSGACDRSILV 323
Query: 121 W 121
W
Sbjct: 324 W 324
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 20/136 (14%)
Query: 2 KHKGLITSMAINTAEDILYTASLDKTVKVWRISD----LKCTETIKAHTEPINAIIAADD 57
KHK + ++A+N +L++ + D+++ VW D + + ++ H + I +I D
Sbjct: 295 KHKSAVNALALNDDGSVLFSGACDRSILVWEREDSANHMVVSGALRGHQKAILCLINVSD 354
Query: 58 GVLYTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTL------------TPDG 105
+L + S D TVR+W+R + D L PVK+L +P+G
Sbjct: 355 -LLLSGSADRTVRIWKRVY---DGSFCCVGVLDGHRKPVKSLAAIQEYNDDDESQSSPNG 410
Query: 106 GGVLYGGCSDGYIHYW 121
++ G DG I W
Sbjct: 411 VVSVFSGSLDGEIKVW 426
>Medtr5g035980.1 | transducin/WD40 repeat protein | HC |
chr5:15642825-15644475 | 20130731
Length = 448
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 71/129 (55%), Gaps = 9/129 (6%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIK-AHTEPINAIIAADDGV 59
+ H ++S+A++ LY+AS D+T K+WR+SD KC E++K AH + INAI+ + GV
Sbjct: 197 VNHIDAVSSLAVSKDGLFLYSASWDRTFKIWRVSDFKCLESVKSAHEDAINAIVVSSSGV 256
Query: 60 LYTASDDATVRVWRRNFCSHDQ-------PHSLTVTLHAKYSPVKALTLTPDGGGVLYGG 112
+YT S D +++WR D+ H L TL S V AL L D G VLY G
Sbjct: 257 VYTGSADRKIKIWREKNHEEDEKMKSKKKKHFLVGTLEKHKSAVNALALNKD-GSVLYSG 315
Query: 113 CSDGYIHYW 121
D I W
Sbjct: 316 ACDRSILVW 324
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 2 KHKGLITSMAINTAEDILYTASLDKTVKVWRIS-----------------DLKCTETIKA 44
KHK + ++A+N +LY+ + D+++ VW S ++ ++
Sbjct: 295 KHKSAVNALALNKDGSVLYSGACDRSILVWEKSNSIIRNCSGLDQDPDDENMVLVGALRG 354
Query: 45 HTEPINAIIAADDGVLYTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPD 104
HT+ I ++ DD ++ + S D +VR+W+R ++ ++ L VK L + D
Sbjct: 355 HTKAILCLVVMDD-LVCSGSADNSVRLWKRGI--DEKSYTCLAVLQGHRKAVKCLAIADD 411
Query: 105 GGGVLYGGCSD 115
GG D
Sbjct: 412 SKSGKNGGVDD 422
>Medtr4g104410.1 | transducin/WD40 repeat protein | HC |
chr4:43205970-43207166 | 20130731
Length = 367
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISDLK--CTETIKAHTEPINAIIAADDG 58
++H ++ +A+N E ++Y+ S DKT K+W +S C E+ AH + INA++ +DDG
Sbjct: 146 IQHNDTVSGLAVNKKEKLMYSVSWDKTFKIWDLSSGNNWCLESFNAHEDAINAVVVSDDG 205
Query: 59 VLYTASDDATVRVWRRNFCSHDQPHSLT-VTLHAKYSP-VKALTLTPDGGGVLYGGCSDG 116
V+YTAS D ++VW+ DQ T V++ K P V AL L D G VL+ G SDG
Sbjct: 206 VVYTASADGCIKVWK---MMDDQVKRYTLVSMVGKQKPAVNALALNSD-GTVLFSGGSDG 261
Query: 117 YIHYW 121
I W
Sbjct: 262 TICQW 266
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 2 KHKGLITSMAINTAEDILYTASLDKTVKVW--RISDLKCTETIKAHTEPINAIIAADDGV 59
K K + ++A+N+ +L++ D T+ W + +D+ E ++ H+ I ++ DD +
Sbjct: 237 KQKPAVNALALNSDGTVLFSGGSDGTICQWQDKQNDIVLKEKLRGHSGAILCLVNVDD-L 295
Query: 60 LYTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGG------VLYGGC 113
L + S D TVR+W+R + L PVK+L GG L+ G
Sbjct: 296 LASGSADLTVRIWQRE--KGGSSYCCRGVLEGHEKPVKSLVAISGGGEDDDEVVTLFSGS 353
Query: 114 SDGYIHYW 121
DG I W
Sbjct: 354 LDGDIRVW 361
>Medtr3g078380.1 | myosin heavy chain kinase B-like protein | HC |
chr3:35313647-35311848 | 20130731
Length = 414
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETI-KAHTEPINAIIAADDGVLY 61
H ++S+A++ LY+ S D+T+K+WR D C E+I AH + INA++ + DG Y
Sbjct: 181 HVDTVSSLALSKDGKFLYSVSWDRTIKIWRTKDFTCLESITNAHDDAINAVVVSYDGTFY 240
Query: 62 TASDDATVRVWRR----NFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGY 117
+ S D ++VW+ + HSL TL S + AL L+ D +LY G D
Sbjct: 241 SGSADKRIKVWKNLQGDDHNKKKHKHSLVDTLEKHNSGINALVLSSD-ESILYSGACDRS 299
Query: 118 IHYW 121
I W
Sbjct: 300 ILVW 303
>Medtr2g060070.1 | transducin/WD40 repeat protein | HC |
chr2:24757910-24756085 | 20130731
Length = 413
Score = 75.9 bits (185), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVL 60
++H I+ + ++ ++Y+ S DKT+KVW +SDLKC E+IKAH + IN ++A G++
Sbjct: 173 IEHADSISCLVVHNG--LIYSGSWDKTLKVWSVSDLKCLESIKAHDDAINGLVAC-KGIV 229
Query: 61 YTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYI 118
Y+AS D ++ W + H+L L + D G +YGG SDGY+
Sbjct: 230 YSASADGKIKAWGKE---GKNLHTLKGVLEGHRDVSFNSVVVSDDGKWVYGGGSDGYV 284
>Medtr4g106480.1 | myosin heavy chain kinase B-like protein | HC |
chr4:44167568-44166363 | 20130731
Length = 401
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIK-AHTEPINAIIAADDGVLY 61
H ++S+A++ +LY+ S D+T+KVW+ DL C E+++ AH + INAI ++DG +Y
Sbjct: 179 HVDTVSSLALSKDGTLLYSVSWDRTIKVWKTKDLTCLESLQNAHDDAINAITVSNDGYVY 238
Query: 62 TASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYI 118
T S D ++VW++N D+ H L TL S + AL L D G VLY G D I
Sbjct: 239 TGSTDKKIKVWKKN--KGDKKHLLVDTLEKHRSGINALALNSD-GSVLYSGACDRSI 292
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 2 KHKGLITSMAINTAEDILYTASLDKTVKVWRISD---LKCTETIKAHTEPINAIIAADDG 58
KH+ I ++A+N+ +LY+ + D+++ V + L ++ HT+ I + D
Sbjct: 266 KHRSGINALALNSDGSVLYSGACDRSILVSEKGENGNLIVIGALRGHTKSILCLAVVSD- 324
Query: 59 VLYTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPD-------GGGVLYG 111
++ + S+D T+R+WR N + + + L P+K LT+ D ++Y
Sbjct: 325 LVCSGSEDKTIRIWRGNTNNVLREYCCLSVLEGHKGPIKCLTIVFDHFDQPSEASFLIYS 384
Query: 112 GCSDGYIHYW 121
G D I W
Sbjct: 385 GSLDCDIKVW 394
>Medtr4g069090.1 | phospholipase A-2-activating protein | HC |
chr4:25969004-25956257 | 20130731
Length = 757
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYT 62
H+ +T + ++ + L ++S+D T++ WR + +C ET +AH PI A+I G L T
Sbjct: 109 HQLQVTGIVVDDGD--LVSSSMDCTLRRWR--NGQCIETWEAHKGPIQAVIKLPTGELVT 164
Query: 63 ASDDATVRVWRRNFCSHD-QPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIH 119
S D T++ W+ C H Q H+ TV A S + L+ + DG L+ +G +
Sbjct: 165 GSSDTTLKTWKGKTCLHTFQGHADTVRGLAVMSDLGILSASHDGSLRLWAVSGEGLME 222
>Medtr4g119620.1 | transducin/WD40 repeat protein | HC |
chr4:49575751-49578750 | 20130731
Length = 326
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYT 62
H + + N +++ + S D+TV+VW + KC + + AH++P+ A+ DG L
Sbjct: 119 HTNYVFCVNFNPQSNVIVSGSFDETVRVWDVKSGKCLKVLPAHSDPVTAVDFNRDGTLIV 178
Query: 63 ASD-DATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYG 111
+S D R+W + H + + + PV + +P+ +L G
Sbjct: 179 SSSYDGLCRIWDAS-----TGHCIKTLIDDENPPVSYVKFSPNAKFILVG 223
>Medtr8g028700.2 | F-box and WD40 domain protein, putative | HC |
chr8:11046422-11042575 | 20130731
Length = 522
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYT 62
H + +A+ ++ +LY+ S D+T+K+W + +CT T+ AHT+ + ++I D L +
Sbjct: 356 HTKSVVCLAVGGSK-MLYSGSKDQTIKIWDLDTFECTMTLNAHTDAVTSLICWDK-FLLS 413
Query: 63 ASDDATVRVWRRN 75
S D T++VW +N
Sbjct: 414 GSSDCTIKVWFQN 426
>Medtr8g028700.1 | F-box and WD40 domain protein, putative | HC |
chr8:11046422-11042593 | 20130731
Length = 522
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYT 62
H + +A+ ++ +LY+ S D+T+K+W + +CT T+ AHT+ + ++I D L +
Sbjct: 356 HTKSVVCLAVGGSK-MLYSGSKDQTIKIWDLDTFECTMTLNAHTDAVTSLICWDK-FLLS 413
Query: 63 ASDDATVRVWRRN 75
S D T++VW +N
Sbjct: 414 GSSDCTIKVWFQN 426
>Medtr8g032850.1 | F-box and WD40 domain protein, putative | LC |
chr8:12598452-12602233 | 20130731
Length = 907
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 19 LYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYTASDDATVRVWRRNFCS 78
LY+ S D+T+K+W + +CT T+ AHT+ + ++I D L + S D T++VW +N
Sbjct: 756 LYSGSKDQTIKLWDLDTFECTTTLNAHTDAVTSLICWDR-YLLSGSSDFTIKVWYKN--- 811
Query: 79 HDQPHSLTVTL-HAKYSPVKALT--LTPDGGGVLYGGCSDGYIHYW 121
+ +L V H + V AL+ PD +++ D +H +
Sbjct: 812 --EEGALEVAYSHNVENGVVALSGMTDPDDKPIIFCSTRDNLVHLF 855
>Medtr4g105700.1 | transducin/WD40 repeat protein | HC |
chr4:43886721-43877728 | 20130731
Length = 908
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 11/126 (8%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADD---GV 59
H+G + MA++ + +L T D+ V VW + CT K H ++ I+ D +
Sbjct: 101 HEGPVMCMAVDPSGGLLATGGADRKVLVWDVDGGFCTHYFKGHGGVVSCIMFHPDPEKQL 160
Query: 60 LYTASDD----ATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSD 115
L++ SDD ATVRVW S + + TL S V ++ ++ DG +L G D
Sbjct: 161 LFSGSDDGGDNATVRVWD---ISKTKRKNCIATLDNHRSAVTSIAVSEDGWTLLSAG-RD 216
Query: 116 GYIHYW 121
+ W
Sbjct: 217 KVVTLW 222
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 7 ITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAI-IAADDGVLYTASD 65
+T++ + + +L++AS + ++VW + LKC + K H P+ + + G+L T
Sbjct: 63 VTALVLGPDDKLLFSASHSRQIRVWDLETLKCVRSWKGHEGPVMCMAVDPSGGLLATGGA 122
Query: 66 DATVRVWRRN--FCSH 79
D V VW + FC+H
Sbjct: 123 DRKVLVWDVDGGFCTH 138
>Medtr6g465150.1 | zinc finger CCCH domain protein | HC |
chr6:23065003-23059765 | 20130731
Length = 438
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 19 LYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYTASDDATVRVW 72
LY+ S+D TV+VW + L+C +T+ HT + +++ D L + S D TV+VW
Sbjct: 286 LYSGSMDNTVRVWNLETLQCLQTLTEHTSVVMSVLCWDQ-FLISCSLDKTVKVW 338
>Medtr1g087120.1 | WD40/YVTN repeat containing domain; bromodomain
protein | HC | chr1:39005297-39023503 | 20130731
Length = 1781
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAA--DDGV- 59
H+G IT +A+++ ++ +AS D ++VWR+ D ++ H +N I + + V
Sbjct: 367 HRGDITDLAVSSNNVLVASASNDFVIRVWRLPDGMSVSVLRGHDAAVNTIAFSPRPNAVY 426
Query: 60 -LYTASDDATVRVW 72
L +ASDD T R+W
Sbjct: 427 HLLSASDDGTCRIW 440
>Medtr2g102277.2 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056791 | 20130731
Length = 921
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 216
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A+ P+ ++ G DG + W
Sbjct: 217 ---QTKSCVQTLDGHTHNVSAVCFHPE-LPIIITGSEDGTVRIW 256
>Medtr2g102277.3 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056785 | 20130731
Length = 921
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 216
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A+ P+ ++ G DG + W
Sbjct: 217 ---QTKSCVQTLDGHTHNVSAVCFHPE-LPIIITGSEDGTVRIW 256
>Medtr2g102277.4 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056312 | 20130731
Length = 917
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 216
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A+ P+ ++ G DG + W
Sbjct: 217 ---QTKSCVQTLDGHTHNVSAVCFHPE-LPIIITGSEDGTVRIW 256
>Medtr2g102277.1 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056791 | 20130731
Length = 917
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 216
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A+ P+ ++ G DG + W
Sbjct: 217 ---QTKSCVQTLDGHTHNVSAVCFHPE-LPIIITGSEDGTVRIW 256
>Medtr4g011950.1 | coatomer subunit beta-like protein | HC |
chr4:3146350-3132249 | 20130731
Length = 931
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 216
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A+ P+ ++ G DG + W
Sbjct: 217 ---QTKSCVQTLDGHTHNVSAVCFHPE-LPIIITGSEDGTVRIW 256