Miyakogusa Predicted Gene
- Lj3g3v0237250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0237250.1 tr|F6LPV2|F6LPV2_MEDTR Rop guanine nucleotide
exchange factor OS=Medicago truncatula
GN=MTR_2g101830,82.1,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; coiled-coil,NULL; seg,NULL; PRONE,Plant specific
Ro,CUFF.40384.1
(539 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g101830.1 | RHO guanyl-nucleotide exchange factor | HC | c... 839 0.0
Medtr4g013165.1 | RHO guanyl-nucleotide exchange factor | HC | c... 610 e-175
Medtr6g087700.1 | RHO guanyl-nucleotide exchange factor | HC | c... 578 e-165
Medtr7g065220.1 | RHO guanyl-nucleotide exchange factor | HC | c... 412 e-115
Medtr3g069590.1 | RHO guanyl-nucleotide exchange factor | HC | c... 390 e-108
Medtr4g075640.1 | Rop guanine nucleotide exchange factor | HC | ... 388 e-108
Medtr5g081410.1 | RHO guanyl-nucleotide exchange factor | HC | c... 382 e-106
Medtr4g019770.1 | RHO guanyl-nucleotide exchange factor | HC | c... 382 e-106
Medtr8g030850.2 | RHO guanyl-nucleotide exchange factor | HC | c... 360 2e-99
Medtr8g030850.1 | RHO guanyl-nucleotide exchange factor | HC | c... 360 2e-99
Medtr3g069590.2 | RHO guanyl-nucleotide exchange factor | HC | c... 343 3e-94
Medtr7g077690.1 | RHO guanyl-nucleotide exchange factor | HC | c... 330 2e-90
Medtr5g025960.1 | RHO guanyl-nucleotide exchange factor | HC | c... 322 7e-88
Medtr5g026140.1 | RHO guanyl-nucleotide exchange factor | LC | c... 54 3e-07
>Medtr2g101830.1 | RHO guanyl-nucleotide exchange factor | HC |
chr2:43813630-43810264 | 20130731
Length = 533
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/542 (77%), Positives = 452/542 (83%), Gaps = 12/542 (2%)
Query: 1 MVRAVEQDQENPRSKLFNFRGMFE-NTGRHAKSLSVDTGTRLDPTAEDGAASSRSQGSRP 59
MVRA EQ+QE RSKLFNFRGMF+ N G+H KSLS D EDG+ASS+SQGS
Sbjct: 1 MVRAGEQEQEGYRSKLFNFRGMFDSNAGKHTKSLSFDAALDQQLPNEDGSASSKSQGS-- 58
Query: 60 INDLDKVPXXXXXXXXXXXXXXXXXXLLQEMEQMRERFAKLLLGEDMSGGGKGVSSALAL 119
+ DK+P LLQEMEQM+ERFAKLLLGEDMSGGGKGVSSALAL
Sbjct: 59 --NSDKIPKAKVISKEEIAAKEAREKLLQEMEQMKERFAKLLLGEDMSGGGKGVSSALAL 116
Query: 120 SNAFTNLAASVYGEQKRLEPMPAERKAKWRKEIDWLLSVTDYVVEMVPTQQKSKDGSQME 179
SNAFTNLAAS++GEQKRLEPMPAERKA+WRKEID LLSVTDYVVEMVP+QQKSKDG+ ME
Sbjct: 117 SNAFTNLAASIFGEQKRLEPMPAERKARWRKEIDLLLSVTDYVVEMVPSQQKSKDGTSME 176
Query: 180 IMTTRQRADLHMNIPALRKLDAMLLECLDNFKDQNEFYYIXXXXXXXXXXXXXXXXXXXW 239
IMTTRQR DLHMNIPALRKLDAML ECLDNFKDQNEFYY+ W
Sbjct: 177 IMTTRQRTDLHMNIPALRKLDAMLFECLDNFKDQNEFYYVSKDADDADGDNAKTNSDDKW 236
Query: 240 WLPVPKVPAEGLSDAARKFLQYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPKNGR 299
WLP PKVPAEGLSDAARKFLQYQKD VNQVLKAAMAINAQVL+EMEIPE+YIESLPKNGR
Sbjct: 237 WLPTPKVPAEGLSDAARKFLQYQKDCVNQVLKAAMAINAQVLSEMEIPENYIESLPKNGR 296
Query: 300 ASLGDSVYRSITVEFFDPDQFLSTMDLSSEHKILDLKNRIEASIVIWKRKMNQKDSKSAW 359
A LGD+ YRSITVEFFDPDQFLSTMDLSSEHK++DLKN+IEASIVIWKRKMNQKD+KSAW
Sbjct: 297 ACLGDAAYRSITVEFFDPDQFLSTMDLSSEHKVVDLKNKIEASIVIWKRKMNQKDNKSAW 356
Query: 360 GSAVSLEKRELFEERAETILLLLKHRFPGIPQSSLDISKIQFNKDVGQAVLESYSRILES 419
GSAVSLEKRELFEERAETILLL+KHRFPGIPQSSLDISKIQFN+DVG AVLESYSRILES
Sbjct: 357 GSAVSLEKRELFEERAETILLLIKHRFPGIPQSSLDISKIQFNRDVGHAVLESYSRILES 416
Query: 420 LAFTVLSRIDDVLQADYQTQNVPGRKSSAARISFSK--PSPREEMDKVGADQTPGSMTLS 477
LAFTVLSRIDDVLQ DYQ QN G++ RIS SK PSPREE+D GA + PG+MTLS
Sbjct: 417 LAFTVLSRIDDVLQVDYQVQNPSGKR----RISVSKPCPSPREEIDNGGA-ELPGAMTLS 471
Query: 478 DFMGWGSDQADSEVKKDPFAASDDFYNNVDMKQPQKLPEVVTTKKVSYLETLGVMRSPTS 537
DFMGWGSDQ D+++KKDPF SDDFY +++ KQ QKLP VVT KKVSYLETLGVMRSPTS
Sbjct: 472 DFMGWGSDQPDTDMKKDPFEISDDFYKDIETKQQQKLPAVVTNKKVSYLETLGVMRSPTS 531
Query: 538 RH 539
RH
Sbjct: 532 RH 533
>Medtr4g013165.1 | RHO guanyl-nucleotide exchange factor | HC |
chr4:3547567-3550746 | 20130731
Length = 400
Score = 610 bits (1574), Expect = e-175, Method: Compositional matrix adjust.
Identities = 304/404 (75%), Positives = 339/404 (83%), Gaps = 8/404 (1%)
Query: 140 MPAERKAKWRKEIDWLLSVTDYVVEMVPTQQKSKDGSQMEIMTTRQRADLHMNIPALRKL 199
MP ERKA+WRKEIDWLLSVTDYVVEMVPTQQKSKDGS MEIMTTRQR DLHMNIPALRKL
Sbjct: 1 MPPERKARWRKEIDWLLSVTDYVVEMVPTQQKSKDGSIMEIMTTRQRTDLHMNIPALRKL 60
Query: 200 DAMLLECLDNFKDQNEFYYIXXXXXXXXXXXXXXXXXXXWWLPVPKVPAEGLSDAARKFL 259
DAML++CLDNFKDQ+EFYY+ WWLP PKVPAEGLS+AAR+FL
Sbjct: 61 DAMLIDCLDNFKDQSEFYYVSKDADDPDRSNGKNDDK--WWLPTPKVPAEGLSEAARRFL 118
Query: 260 QYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPKNGRASLGDSVYRSITVEFFDPDQ 319
QYQKD VNQVLKAAMAINAQ L+EMEIPESYIESLPKNGRASLGD +YR+IT EFFDPDQ
Sbjct: 119 QYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKNGRASLGDIIYRNITDEFFDPDQ 178
Query: 320 FLSTMDLSSEHKILDLKNRIEASIVIWKRKMNQKDSKSAWGSAVSLEKRELFEERAETIL 379
FL T+D+SSEHKILDLKNRIEASIVIW+RKMNQKDSKSAWGSAVSLEKRELFEERAETIL
Sbjct: 179 FLGTIDMSSEHKILDLKNRIEASIVIWRRKMNQKDSKSAWGSAVSLEKRELFEERAETIL 238
Query: 380 LLLKHRFPGIPQSSLDISKIQFNKDVGQAVLESYSRILESLAFTVLSRIDDVLQADYQTQ 439
LLLKHRFPG+PQSSLDISKIQFN DVGQAVLESYSRILESLAFTVLSR++DVL AD QTQ
Sbjct: 239 LLLKHRFPGLPQSSLDISKIQFNGDVGQAVLESYSRILESLAFTVLSRVEDVLHADNQTQ 298
Query: 440 NVPGRKSSAARISFSK----PSPREEMDKVGADQTPGSMTLSDFMGWGSDQADSEVKKDP 495
N + S+ R K P+PR ++D+ A +TP SMTLSDFMGW +DQA+S +++DP
Sbjct: 299 NPTQGRRSSVRNPVPKPDKCPTPR-DVDRSDA-ETPCSMTLSDFMGWSNDQAESFIRRDP 356
Query: 496 FAASDDFYNNVDMKQPQKLPEVVTTKKVSYLETLGVMRSPTSRH 539
FA SDD ++D ++ KL +VT KK SYLE +G +RSPTSRH
Sbjct: 357 FAVSDDLDKDIDTEKLPKLQPIVTDKKASYLENIGGLRSPTSRH 400
>Medtr6g087700.1 | RHO guanyl-nucleotide exchange factor | HC |
chr6:32999908-32996320 | 20130731
Length = 549
Score = 578 bits (1491), Expect = e-165, Method: Compositional matrix adjust.
Identities = 315/559 (56%), Positives = 385/559 (68%), Gaps = 30/559 (5%)
Query: 1 MVRAVEQDQENPRSKLFNFRGMFENTGRHAKSLSVDTGTRLDPTAEDGAASSRS-QGSRP 59
MVRA +S+ F+FR MFE G+H + L D D S+S + +R
Sbjct: 1 MVRAFNHQFSMQKSRSFHFRKMFEIPGKHIQGL-FDKDHDEGSDHSDHKVHSKSFESARY 59
Query: 60 IND--LDKVPXXXXXXXXXXXXXXXXXXLL-----QEMEQMRERFAKLLLGEDMSGGGKG 112
+D L+ P + E + M+ERFAKLLLGEDMSG G G
Sbjct: 60 TSDIPLETQPIGVSLNINNDHIQEAVARMPPKPPPTESDLMKERFAKLLLGEDMSGAGNG 119
Query: 113 VSSALALSNAFTNLAASVYGEQKRLEPMPAERKAKWRKEIDWLLSVTDYVVEMVPTQQKS 172
VSSALALSNA TNLAASV+GEQ +LEPM ERK +WRKEI+WLLSVTD++VE P+QQ +
Sbjct: 120 VSSALALSNAITNLAASVFGEQSKLEPMSQERKTRWRKEIEWLLSVTDHIVEFAPSQQLA 179
Query: 173 KDGSQMEIMTTRQRADLHMNIPALRKLDAMLLECLDNFKDQNEFYYIXXXXXXXXXXXXX 232
KDGS MEIMTTRQR+DL MNIPALRKLDAMLL+ LDNF+DQNEF+Y+
Sbjct: 180 KDGSTMEIMTTRQRSDLLMNIPALRKLDAMLLDILDNFRDQNEFWYVSKSDEEAEGNTVT 239
Query: 233 XXXXXXWWLPVPKVPAEGLSDAARKFLQYQKDSVNQVLKAAMAINAQVLTEMEIPESYIE 292
WWLP+ KVP GLSD A K++Q++KD+VNQVLKAAMAINAQVL+EMEIP++YIE
Sbjct: 240 QRKSDKWWLPIVKVPPTGLSDVAVKWIQFEKDNVNQVLKAAMAINAQVLSEMEIPDNYIE 299
Query: 293 SLPKNGRASLGDSVYRSITVEFFDPDQFLSTMDLSSEHKILDLKNRIEASIVIWKRKMNQ 352
SLPKNGR SLG+S+Y+ ITVE+FDP QFLSTMD+++EHK+LDLKNRIEASIVIWKRKMN
Sbjct: 300 SLPKNGRESLGESIYKCITVEYFDPGQFLSTMDMTTEHKVLDLKNRIEASIVIWKRKMN- 358
Query: 353 KDSKSAWGSAVSLEKRELFEERAETILLLLKHRFPGIPQSSLDISKIQFNKDVGQAVLES 412
KD KS+W SA+S+EKRELFEERAETILL++K FPG+PQSSLDISKIQ+NKDVGQA+LES
Sbjct: 359 KDGKSSWSSAISMEKRELFEERAETILLMIKQEFPGLPQSSLDISKIQYNKDVGQAILES 418
Query: 413 YSRILESLAFTVLSRIDDVLQADYQTQNVPGRKSSAARISF------SKPSPREEMDKVG 466
YSR++ESLA+TVLSRIDDVL D T+N P +S+ R S + SP E +G
Sbjct: 419 YSRVIESLAYTVLSRIDDVLYVDSMTKN-PSLAASSRRFSLDSLPMSDQTSPNSEDSGIG 477
Query: 467 ---ADQTPGSMTLSDFMGWGSDQADSEVKKDPFAASDDFYNNVDMKQPQKLPEVVTTKKV 523
+ TP SMTLSDFMGW ++K+ S ++ K + L ++ T KK
Sbjct: 478 RMSSSDTPPSMTLSDFMGW----TKGDLKR---TNSTSDLEDLKEKDEKVLNKLGTPKKN 530
Query: 524 SY---LETLGVMRSPTSRH 539
Y LE L +RSP +RH
Sbjct: 531 YYLDKLEYLNAIRSPIARH 549
>Medtr7g065220.1 | RHO guanyl-nucleotide exchange factor | HC |
chr7:23784213-23780879 | 20130731
Length = 656
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/373 (53%), Positives = 269/373 (72%), Gaps = 20/373 (5%)
Query: 87 LQEMEQMRERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASVYGEQKRLEPMPAERKA 146
L E+E M+ERFAKLLLGEDMSG G GV +ALA+SNA TNL A+++G+ RLEP+ +E+KA
Sbjct: 182 LSEIEMMKERFAKLLLGEDMSGCGNGVPTALAISNAITNLCATLFGQLWRLEPLRSEKKA 241
Query: 147 KWRKEIDWLLSVTDYVVEMVPTQQKSKDGSQMEIMTTRQRADLHMNIPALRKLDAMLLEC 206
WR+E++W LSV+D++VE+ P Q DGS++E+MT R R+DL++N+PALRKLD MLLE
Sbjct: 242 MWRREMEWFLSVSDHIVELTPNWQTFPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEI 301
Query: 207 LDNFKDQNEFYYI-------XXXXXXXXXXXXXXXXXXXWWLPVPKVPAEGLSDAARKFL 259
D+F D EF+Y+ WWLPVP+VP GL + +RK L
Sbjct: 302 QDSFVD-TEFWYVDQGVIAPDAGTSPSSFRQALQRQEEKWWLPVPRVPPCGLHEKSRKQL 360
Query: 260 QYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPKNGRASLGDSVYRSITVEFFDPDQ 319
Q+++D +Q+LKAAMAIN+ L EM+IPESY+ESLPKN R SLGD ++R IT + F P+
Sbjct: 361 QHKRDCTSQILKAAMAINSITLAEMDIPESYLESLPKNARISLGDVIHRYITSDHFSPEC 420
Query: 320 FLSTMDLSSEHKILDLKNRIEASIVIWKRKMNQK--------DSKSAWGSA----VSLEK 367
L+ +DLSSEH+ +++ NR EAS+ IW++K N K S+++W V +K
Sbjct: 421 LLACLDLSSEHQAIEIANRAEASMYIWRKKTNSKPASVSGRSSSRTSWEMVKDLMVDADK 480
Query: 368 RELFEERAETILLLLKHRFPGIPQSSLDISKIQFNKDVGQAVLESYSRILESLAFTVLSR 427
RELF ERAET+LL LK RFPG+PQ++LD+SKIQ+NKDVG+A+LESYSR+LESLAF ++SR
Sbjct: 481 RELFAERAETLLLTLKQRFPGLPQTALDMSKIQYNKDVGKAILESYSRVLESLAFNMVSR 540
Query: 428 IDDVLQADYQTQN 440
IDDVL D T+N
Sbjct: 541 IDDVLYVDDLTKN 553
>Medtr3g069590.1 | RHO guanyl-nucleotide exchange factor | HC |
chr3:31131780-31127698 | 20130731
Length = 595
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/372 (49%), Positives = 259/372 (69%), Gaps = 19/372 (5%)
Query: 87 LQEMEQMRERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASVYGEQKRLEPMPAERKA 146
+ +++ M+ERFAKLLLGEDMSG GKGV +ALA+SNA TNL A+ +G+ RLEP+P E+K
Sbjct: 98 VSDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKK 157
Query: 147 KWRKEIDWLLSVTDYVVEMVPTQQKSKDGSQMEIMTTRQRADLHMNIPALRKLDAMLLEC 206
W++E++WL+SV+D++VE++P+ Q DG ++E+MT R R D+ +N+PALRKLD MLLE
Sbjct: 158 MWQREMEWLVSVSDHIVELIPSWQTFPDGKKLEVMTCRPRTDICINLPALRKLDNMLLEI 217
Query: 207 LDNFKDQNEFYYI------XXXXXXXXXXXXXXXXXXXWWLPVPKVPAEGLSDAARKFLQ 260
LD+F EF+Y+ WWLPVP+VP GL + +RK L
Sbjct: 218 LDSFT-ATEFWYVDQGIVAADSEGSASFRKSIQRQEEKWWLPVPRVPEAGLGEKSRKKLN 276
Query: 261 YQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPKNGRASLGDSVYRSITVEFFDPDQF 320
+ ++S +Q+LKAAM+IN+ L EME+PESY+E+LPKNGR LGD +YR IT + F +
Sbjct: 277 HSRESASQILKAAMSINSIALAEMEVPESYLETLPKNGRTCLGDFIYRYITSDQFSSECL 336
Query: 321 LSTMDLSSEHKILDLKNRIEASIVIWKRKMNQKD--------SKSAWGSAVSL----EKR 368
L +DLSSEH L++ NR+EA+I +W+R+ N + +KS+WG +KR
Sbjct: 337 LDCLDLSSEHIALEIANRVEAAIYLWRRRSNHRSTPNPNRSTTKSSWGMVKDFMLDGDKR 396
Query: 369 ELFEERAETILLLLKHRFPGIPQSSLDISKIQFNKDVGQAVLESYSRILESLAFTVLSRI 428
EL RAE IL LKHRFPG+ Q++LD SKIQ NKDVG+++LESYSR+LES+A+ ++SRI
Sbjct: 397 ELLAHRAENILSSLKHRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAYNIISRI 456
Query: 429 DDVLQADYQTQN 440
DD+L D T++
Sbjct: 457 DDLLYVDELTKH 468
>Medtr4g075640.1 | Rop guanine nucleotide exchange factor | HC |
chr4:28908900-28905362 | 20130731
Length = 558
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/365 (53%), Positives = 254/365 (69%), Gaps = 17/365 (4%)
Query: 87 LQEMEQMRERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASVYGEQKRLEPMPAERKA 146
L E+E M+ERFAKLLLGEDMSGGGKGV +ALA+SNA TNL+A+V+GE RLEP+ ++KA
Sbjct: 85 LTEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKA 144
Query: 147 KWRKEIDWLLSVTDYVVEMVPTQQKSKDGSQMEIMTTRQRADLHMNIPALRKLDAMLLEC 206
WR+E++WLL V+D +VE+VP+ Q+ G E+M TR R+DL++N+PAL+KLD MLL
Sbjct: 145 MWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLLSM 204
Query: 207 LDNFKDQNEFYYIXXXXXXXXXXXX------XXXXXXXWWLPVPKVPAEGLSDAARKFLQ 260
LD F D +F+Y+ WWLP PK+P GL + RK LQ
Sbjct: 205 LDGFCD-TQFWYVDRGIVLGDSKDCDDYGRPSVRQEEKWWLPSPKLPPNGLCEDDRKRLQ 263
Query: 261 YQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPKNGRASLGDSVYRSITVEFFDPDQF 320
+D NQ+LKAAMAIN+ VL EMEIP +Y+ESLP+NG+A LGD +YR IT F +
Sbjct: 264 QCRDCTNQILKAAMAINSSVLAEMEIPAAYVESLPRNGKACLGDIIYRYITAGQFSSECL 323
Query: 321 LSTMDLSSEHKILDLKNRIEASIVIWKRKMNQKDSKS-----AWGSAV-SL----EKREL 370
L +DLSSEH D+ NRIEA+I +W+ K +K KS +WG V SL EK
Sbjct: 324 LDCLDLSSEHHTQDIANRIEAAIHVWRLKDYKKLKKSGKARRSWGGKVKSLVADGEKNHF 383
Query: 371 FEERAETILLLLKHRFPGIPQSSLDISKIQFNKDVGQAVLESYSRILESLAFTVLSRIDD 430
+RAET+L LK RFPG+PQ++LD++KIQ+NKDVGQ++LESYSR++ESLAF +++RIDD
Sbjct: 384 LVQRAETLLQSLKRRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDD 443
Query: 431 VLQAD 435
VL D
Sbjct: 444 VLYVD 448
>Medtr5g081410.1 | RHO guanyl-nucleotide exchange factor | HC |
chr5:34865519-34861053 | 20130731
Length = 576
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/368 (50%), Positives = 259/368 (70%), Gaps = 19/368 (5%)
Query: 91 EQMRERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASVYGEQKRLEPMPAERKAKWRK 150
+ M+ERFAKLLLGEDMSG GKGVS+ALA+SNA TNL +V+G+ RLEP+P E+K KW++
Sbjct: 84 DMMKERFAKLLLGEDMSGSGKGVSTALAISNAITNLCGTVFGQLWRLEPVPCEKKEKWQR 143
Query: 151 EIDWLLSVTDYVVEMVPTQQKSKDGSQMEIMTTRQRADLHMNIPALRKLDAMLLECLDNF 210
E+DWLL V D++VE++P+ Q DGS+ E+MT R R+D+ +N+PALRKLD MLLE LD+
Sbjct: 144 EMDWLLCVGDHIVELMPSWQTYPDGSKQEVMTCRPRSDIFINLPALRKLDNMLLEILDSC 203
Query: 211 KDQNEFYYIXX------XXXXXXXXXXXXXXXXXWWLPVPKVPAEGLSDAARKFLQYQKD 264
EF+Y+ WWLPVP+VP GLS+ +RK L + ++
Sbjct: 204 TAM-EFWYVDQGIVAPDADGSASFRKRNQRQEEKWWLPVPRVPPAGLSENSRKKLNHTRE 262
Query: 265 SVNQVLKAAMAINAQVLTEMEIPESYIESLPKNGRASLGDSVYRSITVEFFDPDQFLSTM 324
S +Q+LKAAM+IN+ L EME+PESY+++LPKNGR LGD +YR IT + F + L +
Sbjct: 263 SASQILKAAMSINSIALDEMEVPESYLDTLPKNGRTCLGDFIYRYITSDQFSQECLLDCI 322
Query: 325 DLSSEHKILDLKNRIEASIVIWKRKMNQK--------DSKSAWGSA----VSLEKRELFE 372
D+S+EH L++ NR+EA+I +W+R+ + K +KS+W V +KREL
Sbjct: 323 DISNEHVALEIANRLEAAIYVWRRRSHSKPPLYPSRSTTKSSWDIVKDFMVDGDKRELLA 382
Query: 373 ERAETILLLLKHRFPGIPQSSLDISKIQFNKDVGQAVLESYSRILESLAFTVLSRIDDVL 432
ERAE+IL+ LK RFPG+ Q++LD SKIQ NKDVG+++LESYSR+LES+AF +++RIDD+L
Sbjct: 383 ERAESILISLKQRFPGLSQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIVARIDDLL 442
Query: 433 QADYQTQN 440
D T++
Sbjct: 443 YVDDLTKH 450
>Medtr4g019770.1 | RHO guanyl-nucleotide exchange factor | HC |
chr4:6266234-6262535 | 20130731
Length = 542
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/366 (51%), Positives = 255/366 (69%), Gaps = 15/366 (4%)
Query: 89 EMEQMRERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASVYGEQKRLEPMPAERKAKW 148
E+E M+ERFAKLLLGEDMSG G GV +ALA+SNA TNL A+V+G+ RLEP+ E+KA W
Sbjct: 96 EIEMMKERFAKLLLGEDMSGSGNGVPTALAISNAITNLCATVFGQLWRLEPLSPEKKAMW 155
Query: 149 RKEIDWLLSVTDYVVEMVPTQQKSKDGSQMEIMTTRQRADLHMNIPALRKLDAMLLECLD 208
++E++WLL V+D++VE PT Q DGS+ E+MT R R+DL++N+PALRKLD MLLE LD
Sbjct: 156 QREMEWLLCVSDHIVEFKPTWQTFPDGSRFEVMTCRPRSDLYINLPALRKLDNMLLEILD 215
Query: 209 NFKDQNEFYYIXXXXXXXXX--XXXXXXXXXXWWLPVPKVPAEGLSDAARKFLQYQKDSV 266
+F + EF Y+ WWLPVP+VP GL + +RK LQ+++D
Sbjct: 216 SFVN-TEFRYVDQGVMARNEDGSSSFQRQEEKWWLPVPQVPPCGLHENSRKQLQHKRDCA 274
Query: 267 NQVLKAAMAINAQVLTEMEIPESYIESLPKNGRASLGDSVYRSITVEFFDPDQFLSTMDL 326
NQ+ KAAMAIN L EM++P++Y+ESLPK R SLGD +Y+ IT E F P+ L+++++
Sbjct: 275 NQISKAAMAINNITLAEMQVPDAYLESLPKTARGSLGDVIYKFITSEIFSPESLLASLEI 334
Query: 327 SSEHKILDLKNRIEASIVIWKRKMNQKDSKSA--------WGS----AVSLEKRELFEER 374
SSEH+ + + NR+EASI IW +K N K + A WG V +K E+ ER
Sbjct: 335 SSEHQAIKIANRVEASIYIWHKKTNSKPANRATRSSSRSSWGMFKDLIVEGDKSEMLIER 394
Query: 375 AETILLLLKHRFPGIPQSSLDISKIQFNKDVGQAVLESYSRILESLAFTVLSRIDDVLQA 434
ET+LL LK FP +PQ+SLD+SKIQ NKDVG+++LESYSR+LESLA +++RIDDVL
Sbjct: 395 GETLLLSLKQHFPFLPQTSLDVSKIQCNKDVGKSILESYSRVLESLASNIVARIDDVLYV 454
Query: 435 DYQTQN 440
D T++
Sbjct: 455 DNLTKH 460
>Medtr8g030850.2 | RHO guanyl-nucleotide exchange factor | HC |
chr8:11477789-11473977 | 20130731
Length = 470
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 178/378 (47%), Positives = 251/378 (66%), Gaps = 24/378 (6%)
Query: 86 LLQEMEQMRERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASVYGEQKRLEPMPAERK 145
L E+E M+ERF+KLLLGEDMSGGGKGV +A+ +SN+ TNL A+V+G+ +LEP+ E+K
Sbjct: 94 LESELEMMKERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKK 153
Query: 146 AKWRKEIDWLLSVTDYVVEMVPTQQKSKDGSQMEIMTTRQRADLHMNIPALRKLDAMLLE 205
A W++E++ L+SV DY+VE PT Q DG+ +E+MT+R RAD+++N+PAL+KLD ML+E
Sbjct: 154 AMWKREMNCLMSVCDYIVEFAPTAQYLDDGTIVEMMTSRPRADIYINLPALQKLDTMLIE 213
Query: 206 CLDNFKDQNEFYYIXXXXXXXXXXXXXXXXX---------------XXWWLPVPKVPAEG 250
D+F+D EF+Y WWLPVP V G
Sbjct: 214 IFDSFQD-TEFWYAEQGSMSGNSNRSSHSNAGSKAGSFRIIAQRKDEKWWLPVPCVHTGG 272
Query: 251 LSDAARKFLQYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPKNGRASLGDSVYRSI 310
LSD +RK L ++D NQ+ KAAMAIN+ VL EM+IPE+Y+ +LPK+GR+SLGD++YR +
Sbjct: 273 LSDKSRKHLIEKRDCANQIHKAAMAINSSVLAEMDIPETYMANLPKSGRSSLGDTIYRYM 332
Query: 311 -TVEFFDPDQFLSTMDLSSEHKILDLKNRIEASIVIWKRKMNQKDSKSAWGSAVSL---- 365
+ + F P L + + +EH+ L+L +R+E+S+ W+RK SKS+W L
Sbjct: 333 HSGDKFSPGNLLDCLKIRTEHEALELADRVESSMYTWRRKSCLSHSKSSWNKVKELMAET 392
Query: 366 ---EKRELFEERAETILLLLKHRFPGIPQSSLDISKIQFNKDVGQAVLESYSRILESLAF 422
+K L ERAET+L LK R+P + Q+SLD KIQ+N+DVG+AVLESYSR+LE LAF
Sbjct: 393 DHSDKNYLLAERAETLLFFLKQRYPELSQTSLDTCKIQYNQDVGKAVLESYSRVLEGLAF 452
Query: 423 TVLSRIDDVLQADYQTQN 440
+++ I+DVL AD +N
Sbjct: 453 NIVAWIEDVLCADKSMRN 470
>Medtr8g030850.1 | RHO guanyl-nucleotide exchange factor | HC |
chr8:11478040-11473877 | 20130731
Length = 470
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 178/378 (47%), Positives = 251/378 (66%), Gaps = 24/378 (6%)
Query: 86 LLQEMEQMRERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASVYGEQKRLEPMPAERK 145
L E+E M+ERF+KLLLGEDMSGGGKGV +A+ +SN+ TNL A+V+G+ +LEP+ E+K
Sbjct: 94 LESELEMMKERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKK 153
Query: 146 AKWRKEIDWLLSVTDYVVEMVPTQQKSKDGSQMEIMTTRQRADLHMNIPALRKLDAMLLE 205
A W++E++ L+SV DY+VE PT Q DG+ +E+MT+R RAD+++N+PAL+KLD ML+E
Sbjct: 154 AMWKREMNCLMSVCDYIVEFAPTAQYLDDGTIVEMMTSRPRADIYINLPALQKLDTMLIE 213
Query: 206 CLDNFKDQNEFYYIXXXXXXXXXXXXXXXXX---------------XXWWLPVPKVPAEG 250
D+F+D EF+Y WWLPVP V G
Sbjct: 214 IFDSFQD-TEFWYAEQGSMSGNSNRSSHSNAGSKAGSFRIIAQRKDEKWWLPVPCVHTGG 272
Query: 251 LSDAARKFLQYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPKNGRASLGDSVYRSI 310
LSD +RK L ++D NQ+ KAAMAIN+ VL EM+IPE+Y+ +LPK+GR+SLGD++YR +
Sbjct: 273 LSDKSRKHLIEKRDCANQIHKAAMAINSSVLAEMDIPETYMANLPKSGRSSLGDTIYRYM 332
Query: 311 -TVEFFDPDQFLSTMDLSSEHKILDLKNRIEASIVIWKRKMNQKDSKSAWGSAVSL---- 365
+ + F P L + + +EH+ L+L +R+E+S+ W+RK SKS+W L
Sbjct: 333 HSGDKFSPGNLLDCLKIRTEHEALELADRVESSMYTWRRKSCLSHSKSSWNKVKELMAET 392
Query: 366 ---EKRELFEERAETILLLLKHRFPGIPQSSLDISKIQFNKDVGQAVLESYSRILESLAF 422
+K L ERAET+L LK R+P + Q+SLD KIQ+N+DVG+AVLESYSR+LE LAF
Sbjct: 393 DHSDKNYLLAERAETLLFFLKQRYPELSQTSLDTCKIQYNQDVGKAVLESYSRVLEGLAF 452
Query: 423 TVLSRIDDVLQADYQTQN 440
+++ I+DVL AD +N
Sbjct: 453 NIVAWIEDVLCADKSMRN 470
>Medtr3g069590.2 | RHO guanyl-nucleotide exchange factor | HC |
chr3:31131780-31127698 | 20130731
Length = 435
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 164/335 (48%), Positives = 227/335 (67%), Gaps = 19/335 (5%)
Query: 87 LQEMEQMRERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASVYGEQKRLEPMPAERKA 146
+ +++ M+ERFAKLLLGEDMSG GKGV +ALA+SNA TNL A+ +G+ RLEP+P E+K
Sbjct: 98 VSDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKK 157
Query: 147 KWRKEIDWLLSVTDYVVEMVPTQQKSKDGSQMEIMTTRQRADLHMNIPALRKLDAMLLEC 206
W++E++WL+SV+D++VE++P+ Q DG ++E+MT R R D+ +N+PALRKLD MLLE
Sbjct: 158 MWQREMEWLVSVSDHIVELIPSWQTFPDGKKLEVMTCRPRTDICINLPALRKLDNMLLEI 217
Query: 207 LDNFKDQNEFYYI------XXXXXXXXXXXXXXXXXXXWWLPVPKVPAEGLSDAARKFLQ 260
LD+F EF+Y+ WWLPVP+VP GL + +RK L
Sbjct: 218 LDSFT-ATEFWYVDQGIVAADSEGSASFRKSIQRQEEKWWLPVPRVPEAGLGEKSRKKLN 276
Query: 261 YQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPKNGRASLGDSVYRSITVEFFDPDQF 320
+ ++S +Q+LKAAM+IN+ L EME+PESY+E+LPKNGR LGD +YR IT + F +
Sbjct: 277 HSRESASQILKAAMSINSIALAEMEVPESYLETLPKNGRTCLGDFIYRYITSDQFSSECL 336
Query: 321 LSTMDLSSEHKILDLKNRIEASIVIWKRKMNQKD--------SKSAWGSAVSL----EKR 368
L +DLSSEH L++ NR+EA+I +W+R+ N + +KS+WG +KR
Sbjct: 337 LDCLDLSSEHIALEIANRVEAAIYLWRRRSNHRSTPNPNRSTTKSSWGMVKDFMLDGDKR 396
Query: 369 ELFEERAETILLLLKHRFPGIPQSSLDISKIQFNK 403
EL RAE IL LKHRFPG+ Q++LD SKIQ NK
Sbjct: 397 ELLAHRAENILSSLKHRFPGLTQTTLDTSKIQCNK 431
>Medtr7g077690.1 | RHO guanyl-nucleotide exchange factor | HC |
chr7:29297652-29300584 | 20130731
Length = 532
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/418 (42%), Positives = 249/418 (59%), Gaps = 67/418 (16%)
Query: 89 EMEQMRERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASVYGEQKRLEPMPAERKAKW 148
E+E M+ERFAKLLLGEDMSGGGKGVS+A+ +SNA TNL A+V+G+ +LEP+ E+K W
Sbjct: 113 ELEMMKERFAKLLLGEDMSGGGKGVSTAVTISNAITNLYATVFGQSLKLEPLKPEKKIMW 172
Query: 149 RKEIDWLLSVTDYVVEMVPTQQKSKDGSQMEIMTTRQRADLHMNIPALRKLDAMLLECLD 208
++E+ LLSV DY+ E PT Q +DG+ +E+M +R R+D+++N+PAL+KLD ML+E LD
Sbjct: 173 KREMKVLLSVCDYIQEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLIEILD 232
Query: 209 NFKDQNEFYYIXXXXX------XXXXXXXXXXXXXXWWLPVPKVPAEGLSDAARKFLQYQ 262
+F+D EF+Y WWLPVP V GLS+ +RK L +
Sbjct: 233 SFED-TEFWYAENVSASSPRLRAASFRRIAQRKDEKWWLPVPCVLPGGLSEKSRKHLTEK 291
Query: 263 KDSVNQVLKAAMAINAQVLTEMEIPESYIESLP--------------------------- 295
+D NQ+LKAAMAIN+ +L +++IPE+YI+ LP
Sbjct: 292 RDCANQILKAAMAINSNILADIDIPETYIDDLPQLKFYCQVIDDSFKCDPIRQMSWNLSS 351
Query: 296 -------------------------KNGRASLGDSVYRSI-TVEFFDPDQFLSTMDLSSE 329
K+GR +LGD++Y+ + TV+ F P++ L + LSSE
Sbjct: 352 NFISLLWKPIIAAESCKKRDDIIPYKSGRGNLGDTIYQYMYTVDKFSPERLLDCLKLSSE 411
Query: 330 HKILDLKNRIEASIVIWKRKMNQKDSKSAWGSAVSL-------EKRELFEERAETILLLL 382
H+ LDL +R+E+S+ W+RK SKS+W L +K + +RAE +L L
Sbjct: 412 HEALDLADRVESSMYTWRRKACLSHSKSSWKEVKDLMDDTDWKDKNYILADRAEALLFSL 471
Query: 383 KHRFPGIPQSSLDISKIQFNKDVGQAVLESYSRILESLAFTVLSRIDDVLQADYQTQN 440
K R+P + Q+SLD KIQ+NKDVG+AVLESYSR+LE LAF ++ I+DVL D N
Sbjct: 472 KQRYPELSQTSLDACKIQYNKDVGKAVLESYSRVLEGLAFNTVAWIEDVLYVDKSMAN 529
>Medtr5g025960.1 | RHO guanyl-nucleotide exchange factor | HC |
chr5:10622248-10613821 | 20130731
Length = 558
Score = 322 bits (824), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 165/356 (46%), Positives = 238/356 (66%), Gaps = 11/356 (3%)
Query: 89 EMEQMRERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASVYGEQKRLEPMPAERKAKW 148
++E M+E F+KLLLGED++GG KG+++ALALSNA TNL+ +V+GE +LEP+ ERK+KW
Sbjct: 118 DIEAMKENFSKLLLGEDVTGGTKGITTALALSNAITNLSVTVFGELWKLEPLSEERKSKW 177
Query: 149 RKEIDWLLSVTDYVVEMVPTQQKSKDGSQMEIMTTRQRADLHMNIPALRKLDAMLLECLD 208
R+E+DWLLS T+Y+VE+VP +Q + +G EIMT + RAD+HMN+PAL+KLD ML++ LD
Sbjct: 178 RREMDWLLSPTNYMVELVPAKQNNANGRIFEIMTPKARADIHMNLPALQKLDCMLIDALD 237
Query: 209 NFKDQNEFYYIXXXXXXXXXXXXXXXXXXXWWLPVPKVPAEGLSDAARKFLQYQKDSVNQ 268
+ + EF+Y WWLP P+VP GLSD RK L +Q V Q
Sbjct: 238 SMV-KTEFWY-GEGGSRTEGKDMSVRHSKRWWLPSPQVPKTGLSDTERKRLVHQGKVVRQ 295
Query: 269 VLKAAMAINAQVLTEMEIPESYIESLPKNGRASLGDSVYRSITVEFFDPDQFLSTMDLSS 328
V KAA +IN VL EM +P ++L K+G+A+LG +++ +T E + + +++L S
Sbjct: 296 VFKAAKSINDNVLLEMPVPMVIRDALAKSGKANLGQELHKVLTAESTSGEDMIKSLNLKS 355
Query: 329 EHKILDLKNRIEASIVIWK-RKMNQKDSKS----AW----GSAVSLEKRELFEERAETIL 379
EH L+ N++EA I K R M Q KS +W G +K EL +RAET+L
Sbjct: 356 EHMALETINKLEAVIFSLKERTMEQVTGKSPVRTSWSFVKGPMSEADKLELLLDRAETLL 415
Query: 380 LLLKHRFPGIPQSSLDISKIQFNKDVGQAVLESYSRILESLAFTVLSRIDDVLQAD 435
LLK R+P +PQ+ LD +K+Q+ KD+G +++E+YSR+L +LAF++LSRI D+LQ D
Sbjct: 416 QLLKIRYPNLPQTFLDAAKVQYGKDIGHSIMEAYSRVLGNLAFSILSRIGDILQED 471
>Medtr5g026140.1 | RHO guanyl-nucleotide exchange factor | LC |
chr5:10738291-10738789 | 20130731
Length = 100
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 35/46 (76%)
Query: 130 VYGEQKRLEPMPAERKAKWRKEIDWLLSVTDYVVEMVPTQQKSKDG 175
++GE L+ + ERK+KWR+++DWLL T+Y+VE+VP +Q + +G
Sbjct: 12 IFGELWNLKQLSEERKSKWRRKMDWLLPPTNYMVELVPAKQNNANG 57