Miyakogusa Predicted Gene

Lj3g3v0235100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0235100.1 tr|Q014K1|Q014K1_OSTTA Ribosomal protein L37
(ISS) OS=Ostreococcus tauri GN=Ot07g04050 PE=3
SV=1,74.6,4e-19,Ribosomal_L37e,Ribosomal protein L37e; 60S RIBOSOMAL
PROTEIN L37,NULL; 60S RIBOSOMAL PROTEIN L37,Rib,CUFF.40373.1
         (79 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g101900.1 | 60S ribosomal protein L37-1 | HC | chr2:438464...   117   2e-27
Medtr0147s0070.1 | 60S ribosomal protein L37-1 | HC | scaffold01...   117   2e-27

>Medtr2g101900.1 | 60S ribosomal protein L37-1 | HC |
          chr2:43846454-43845522 | 20130731
          Length = 94

 Score =  117 bits (293), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/64 (89%), Positives = 60/64 (93%)

Query: 1  MGKGTGSFGKRRNKPPTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNK  TLCVRCGRRSFHLQKSRC+ACA+PAAR RKYNWS KAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSEKAIRRKTTG 60

Query: 61 TGRV 64
          TGR+
Sbjct: 61 TGRM 64


>Medtr0147s0070.1 | 60S ribosomal protein L37-1 | HC |
          scaffold0147:22544-24566 | 20130731
          Length = 95

 Score =  117 bits (293), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/64 (89%), Positives = 60/64 (93%)

Query: 1  MGKGTGSFGKRRNKPPTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNK  TLCVRCGRRSFHLQKSRC+ACA+PAAR RKYNWS KAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSEKAIRRKTTG 60

Query: 61 TGRV 64
          TGR+
Sbjct: 61 TGRM 64