Miyakogusa Predicted Gene

Lj3g3v0234080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0234080.1 Non Characterized Hit- tr|I1K5V0|I1K5V0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,37.37,4e-18,seg,NULL,CUFF.40363.1
         (209 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g101980.1 | hypothetical protein | HC | chr2:43878618-4387...   238   3e-63
Medtr0147s0050.1 | ATP-dependent RNA helicase DDX11-like protein...   183   1e-46
Medtr0147s0020.1 | hypothetical protein | LC | scaffold0147:7730...   105   3e-23
Medtr8g103530.1 | hypothetical protein | HC | chr8:43565104-4356...    83   1e-16
Medtr6g086915.1 | hypothetical protein | HC | chr6:32825512-3282...    73   2e-13

>Medtr2g101980.1 | hypothetical protein | HC |
           chr2:43878618-43879420 | 20130731
          Length = 203

 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 131/211 (62%), Positives = 152/211 (72%), Gaps = 10/211 (4%)

Query: 1   MLLRETIRKTKLLLHKSLKNFKSF-FGGYQKLPRSLSFNPFLGRSGNTSRTYTSDQFYNE 59
           MLLR+TI KT+ LL K+LKNFK F FGGYQKLPRSLSFNPFLGRS N++RTYTSDQFYNE
Sbjct: 1   MLLRKTICKTRFLLKKTLKNFKCFIFGGYQKLPRSLSFNPFLGRSSNSARTYTSDQFYNE 60

Query: 60  FYDMLQSDLSRMNRS-EHDISMRRPKEVEEPMGDXXXXXXXXXXXXXXXXXXXXXXXXXX 118
           FYD+LQSDL+R+NR+ E  +++ R K +E+                              
Sbjct: 61  FYDILQSDLNRINRNGEISMNVSREKTMEDAAS--------IEKKHVSFVKQISPENGVK 112

Query: 119 XXDLNSKNKNEEGVHDLAQKMKELEMADSGDVEHVLDIEEALHYYSRLTSPVYLDIVDKF 178
                   KN+  V++LA KMKELEM DSGDVE VLDIEEALHYYSRL SP+YLDIVDKF
Sbjct: 113 EKKDKGNKKNDSCVNELALKMKELEMNDSGDVEQVLDIEEALHYYSRLKSPIYLDIVDKF 172

Query: 179 FTDMHSEINLPQSSVSIKHSKSKRRFGSIRL 209
           FTDMHSE+++ QSSVSIK SKSK RFGSIRL
Sbjct: 173 FTDMHSELSVSQSSVSIKRSKSKGRFGSIRL 203


>Medtr0147s0050.1 | ATP-dependent RNA helicase DDX11-like protein,
           putative | HC | scaffold0147:13680-13063 | 20130731
          Length = 205

 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/208 (51%), Positives = 130/208 (62%), Gaps = 10/208 (4%)

Query: 3   LRETIRKTKLLLHKSLKNFKSFF-GGYQKLPRSLSFNPFLGRSGNTSRTYTSDQFYNEFY 61
           LR+TI KTK   +K LKNF+SFF GGYQKLPRSLSFN FL    N ++ Y+SDQFYNEFY
Sbjct: 4   LRKTIHKTKSFFNKRLKNFRSFFSGGYQKLPRSLSFN-FLCNMDN-AKAYSSDQFYNEFY 61

Query: 62  DMLQSDLSRMNRSEHDISMRRPKEVEEPMGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 121
           D+LQSDLS M          +   +E+                                D
Sbjct: 62  DILQSDLSTMKM----FGKGKEPAMEDAARSGNFVCFSKRSPQKSAYEGSVQSQLRKKED 117

Query: 122 LNSKNKNEEGVHDLAQKMKELEMADSGDVEHVLDIEEALHYYSRLTSPVYLDIVDKFFTD 181
           LNS+N N+ G H LAQKMK+++M +SGD+EHVLDIEEALHYYSRL SPVYLDIVD+FF D
Sbjct: 118 LNSQNTNK-GAHVLAQKMKKMDMMESGDLEHVLDIEEALHYYSRLKSPVYLDIVDRFFID 176

Query: 182 MHSEINLPQSSVSIKHSKSKRRFGSIRL 209
           ++S+   PQ S S K   SK R G ++L
Sbjct: 177 INSDFTFPQPSASFK--SSKERLGPVQL 202


>Medtr0147s0020.1 | hypothetical protein | LC |
           scaffold0147:7730-6502 | 20130731
          Length = 147

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/65 (75%), Positives = 57/65 (87%)

Query: 130 EGVHDLAQKMKELEMADSGDVEHVLDIEEALHYYSRLTSPVYLDIVDKFFTDMHSEINLP 189
           +G H LAQKMKEL+M DSGD+EHVLDIEEALHYYSRL SPVYLDIV++FF D++S+  LP
Sbjct: 3   KGAHVLAQKMKELDMMDSGDLEHVLDIEEALHYYSRLKSPVYLDIVNRFFIDINSDFTLP 62

Query: 190 QSSVS 194
           Q SVS
Sbjct: 63  QPSVS 67


>Medtr8g103530.1 | hypothetical protein | HC |
           chr8:43565104-43566115 | 20130731
          Length = 203

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 22/216 (10%)

Query: 1   MLLRETIRKTKLLLHKSLKNFKSFFG-GYQKLPRSLSFNPFLGRSGNTSRTYTSDQFYNE 59
           MLLR +I K K     +L NF+S F   YQK+P++           N S     ++FY++
Sbjct: 1   MLLRTSISKYKKFFQNTLNNFRSLFSRSYQKIPKT--------PPHNHSSYNDLEKFYSD 52

Query: 60  FYDMLQSDLSRMNRSEHDISM------RRPKEVEEPMGDXXXXXXXXXXXXXXXXXXXXX 113
           F +   S+  +  +   + +M      ++ +E+     +                     
Sbjct: 53  FTEKWDSEKGKSKKRRKNKAMLSSSTTKQEEELHVHNHNENMVALNNAKEKNEMEKSEEL 112

Query: 114 XXXXXXXDLNSKNKNEEGVHDLAQKMKELEMADSGDVEHVLDIEEALHYYSRLTSPVYLD 173
                  D +S   ++  V    +K+KELEM +  +V+++LDIEE LHYYSRLT P YL+
Sbjct: 113 DGEQCKQDSSSMFNSKSMVE---KKLKELEMLEMSNVDYILDIEEVLHYYSRLTCPSYLE 169

Query: 174 IVDKFFTDMHSE-INLPQSSVSIKHSKSKRRFGSIR 208
           IVDKFF +M+SE    P++  S+    SK +  S+R
Sbjct: 170 IVDKFFVEMYSEFFGCPETPASV---NSKLKMRSVR 202


>Medtr6g086915.1 | hypothetical protein | HC |
           chr6:32825512-32824552 | 20130731
          Length = 173

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 88/197 (44%), Gaps = 41/197 (20%)

Query: 1   MLLRETIRKTKLLLHKSLKNFKSFFGG-YQK----------LPRSLSFNPFLGRS-GNTS 48
           MLLR +I  TK     +LKNFKS F   YQK          L  SL+ N  L  +  NTS
Sbjct: 1   MLLRSSITTTKKFFKNTLKNFKSLFSSDYQKLPKSDSPHNHLSYSLAANHVLDMNINNTS 60

Query: 49  RTYTSDQFYNEFYDMLQSDLSRMNRSEHDISMRRPKEVEEPMGDXXXXXXXXXXXXXXXX 108
            +Y                LS  + SE   +    +EV +   +                
Sbjct: 61  GSYMK--------------LSNASPSEKK-NWANKREVFDNKNNEKKLTIQRGKQKDSS- 104

Query: 109 XXXXXXXXXXXXDLNSKNKNEEGVHDLAQKMKELEMADSGDVEHVLDIEEALHYYSRLTS 168
                          SK+  E     + +K+KELEM D  +V++ +DIEE L+YYSRLT 
Sbjct: 105 -------------FTSKDMKERKYCMVKEKLKELEMLDISNVDYAMDIEEVLYYYSRLTC 151

Query: 169 PVYLDIVDKFFTDMHSE 185
           P Y++IVD+FF +M+S+
Sbjct: 152 PAYVEIVDRFFMEMYSD 168