Miyakogusa Predicted Gene

Lj3g3v0129260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0129260.1 Non Characterized Hit- tr|E1ZD22|E1ZD22_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,43.43,5e-18,seg,NULL,
NODE_63672_length_1114_cov_45.025135.path1.1
         (333 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g071010.1 | transmembrane protein, putative | HC | chr4:26...   346   2e-95
Medtr4g071010.2 | transmembrane protein, putative | HC | chr4:26...   342   3e-94
Medtr4g071010.4 | transmembrane protein, putative | HC | chr4:26...   342   3e-94
Medtr4g071010.3 | transmembrane protein, putative | HC | chr4:26...   342   3e-94

>Medtr4g071010.1 | transmembrane protein, putative | HC |
           chr4:26746895-26750545 | 20130731
          Length = 442

 Score =  346 bits (887), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 202/310 (65%), Positives = 228/310 (73%), Gaps = 23/310 (7%)

Query: 33  PSSTTTFKLCCALS-SNNAESSEPTSPEAQ-TGPVDPVKLAFNKAKTYKEESGKSNPGSG 90
           P++  T KLCC ++  NN ESSE  S EA+ T  VDP+KLAFNKAK YKE S KSN   G
Sbjct: 24  PTALKTTKLCCVMNKENNKESSEVNSIEAEKTASVDPIKLAFNKAKAYKE-SIKSNTDLG 82

Query: 91  IEQSDANGENSVNQGDAVDGRQKDLPVSLKIAMEKAKKYKQNKGVAIAETTQGLQGGRER 150
           IEQ+ A            DG +KD+ VS+KIAMEKAKKYKQNKGVA++ET QGLQGG E 
Sbjct: 83  IEQNSA------------DGGKKDVSVSVKIAMEKAKKYKQNKGVAVSETDQGLQGGSES 130

Query: 151 TL-----ENSVGEKEGKLSVSKIDFVGLDFGDKKKTRGLPPGLVPVTDSFSDGDLTEVEF 205
           T      +NSV +K G+LSVSKIDFVGL F D KKTRGLPPGLVP +D FSD DL EVE 
Sbjct: 131 TWGENVNDNSVSKK-GELSVSKIDFVGLGFADNKKTRGLPPGLVPFSDPFSDDDLPEVEL 189

Query: 206 IVGDATKFDAVTD--PXXXXXXXXXXXLYKPTVSTWGVFPRPGNISKTFGGGRVIRPGEV 263
           IVGD   F+A T   P           LYKP VSTWGVFPRP NISKT+GGGR IRPGEV
Sbjct: 190 IVGDTNNFNATTTTAPQPEQTKDDESELYKPKVSTWGVFPRPNNISKTYGGGRTIRPGEV 249

Query: 264 LETDEEKAMREVRTKQLLAAYKKRTGLDIDPKLKSECEEALKDGDLLMNAGKLKEALPYY 323
           LE +EEKA +E RTKQ+LAAYKK+ GL IDPKLK ECEEALKDGD LM+AGKLK+ALPYY
Sbjct: 250 LENEEEKAAKEARTKQMLAAYKKKYGLSIDPKLKIECEEALKDGDFLMDAGKLKDALPYY 309

Query: 324 EKVMDKITFK 333
           EKV+DK+ FK
Sbjct: 310 EKVIDKLPFK 319


>Medtr4g071010.2 | transmembrane protein, putative | HC |
           chr4:26746895-26750545 | 20130731
          Length = 321

 Score =  342 bits (877), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 200/309 (64%), Positives = 227/309 (73%), Gaps = 21/309 (6%)

Query: 33  PSSTTTFKLCCALS-SNNAESSEPTSPEAQ-TGPVDPVKLAFNKAKTYKEESGKSNPGSG 90
           P++  T KLCC ++  NN ESSE  S EA+ T  VDP+KLAFNKAK YKE S KSN   G
Sbjct: 24  PTALKTTKLCCVMNKENNKESSEVNSIEAEKTASVDPIKLAFNKAKAYKE-SIKSNTDLG 82

Query: 91  IEQSDANGENSVNQGDAVDGRQKDLPVSLKIAMEKAKKYKQNKGVAIAETTQGLQGGRER 150
           IEQ+ A            DG +KD+ VS+KIAMEKAKKYKQNKGVA++ET QGLQGG E 
Sbjct: 83  IEQNSA------------DGGKKDVSVSVKIAMEKAKKYKQNKGVAVSETDQGLQGGSES 130

Query: 151 TLENSVGE----KEGKLSVSKIDFVGLDFGDKKKTRGLPPGLVPVTDSFSDGDLTEVEFI 206
           T   +V +    K+G+LSVSKIDFVGL F D KKTRGLPPGLVP +D FSD DL EVE I
Sbjct: 131 TWGENVNDNSVSKKGELSVSKIDFVGLGFADNKKTRGLPPGLVPFSDPFSDDDLPEVELI 190

Query: 207 VGDATKFDAVTD--PXXXXXXXXXXXLYKPTVSTWGVFPRPGNISKTFGGGRVIRPGEVL 264
           VGD   F+A T   P           LYKP VSTWGVFPRP NISKT+GGGR IRPGEVL
Sbjct: 191 VGDTNNFNATTTTAPQPEQTKDDESELYKPKVSTWGVFPRPNNISKTYGGGRTIRPGEVL 250

Query: 265 ETDEEKAMREVRTKQLLAAYKKRTGLDIDPKLKSECEEALKDGDLLMNAGKLKEALPYYE 324
           E +EEKA +E RTKQ+LAAYKK+ GL IDPKLK ECEEALKDGD LM+AGKLK+ALPYYE
Sbjct: 251 ENEEEKAAKEARTKQMLAAYKKKYGLSIDPKLKIECEEALKDGDFLMDAGKLKDALPYYE 310

Query: 325 KVMDKITFK 333
           KV+DK+ FK
Sbjct: 311 KVIDKLPFK 319


>Medtr4g071010.4 | transmembrane protein, putative | HC |
           chr4:26746895-26749427 | 20130731
          Length = 322

 Score =  342 bits (876), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 200/309 (64%), Positives = 227/309 (73%), Gaps = 21/309 (6%)

Query: 33  PSSTTTFKLCCALS-SNNAESSEPTSPEAQ-TGPVDPVKLAFNKAKTYKEESGKSNPGSG 90
           P++  T KLCC ++  NN ESSE  S EA+ T  VDP+KLAFNKAK YKE S KSN   G
Sbjct: 24  PTALKTTKLCCVMNKENNKESSEVNSIEAEKTASVDPIKLAFNKAKAYKE-SIKSNTDLG 82

Query: 91  IEQSDANGENSVNQGDAVDGRQKDLPVSLKIAMEKAKKYKQNKGVAIAETTQGLQGGRER 150
           IEQ+ A            DG +KD+ VS+KIAMEKAKKYKQNKGVA++ET QGLQGG E 
Sbjct: 83  IEQNSA------------DGGKKDVSVSVKIAMEKAKKYKQNKGVAVSETDQGLQGGSES 130

Query: 151 TLENSVGE----KEGKLSVSKIDFVGLDFGDKKKTRGLPPGLVPVTDSFSDGDLTEVEFI 206
           T   +V +    K+G+LSVSKIDFVGL F D KKTRGLPPGLVP +D FSD DL EVE I
Sbjct: 131 TWGENVNDNSVSKKGELSVSKIDFVGLGFADNKKTRGLPPGLVPFSDPFSDDDLPEVELI 190

Query: 207 VGDATKFDAVTD--PXXXXXXXXXXXLYKPTVSTWGVFPRPGNISKTFGGGRVIRPGEVL 264
           VGD   F+A T   P           LYKP VSTWGVFPRP NISKT+GGGR IRPGEVL
Sbjct: 191 VGDTNNFNATTTTAPQPEQTKDDESELYKPKVSTWGVFPRPNNISKTYGGGRTIRPGEVL 250

Query: 265 ETDEEKAMREVRTKQLLAAYKKRTGLDIDPKLKSECEEALKDGDLLMNAGKLKEALPYYE 324
           E +EEKA +E RTKQ+LAAYKK+ GL IDPKLK ECEEALKDGD LM+AGKLK+ALPYYE
Sbjct: 251 ENEEEKAAKEARTKQMLAAYKKKYGLSIDPKLKIECEEALKDGDFLMDAGKLKDALPYYE 310

Query: 325 KVMDKITFK 333
           KV+DK+ FK
Sbjct: 311 KVIDKLPFK 319


>Medtr4g071010.3 | transmembrane protein, putative | HC |
           chr4:26746895-26750545 | 20130731
          Length = 322

 Score =  342 bits (876), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 200/309 (64%), Positives = 227/309 (73%), Gaps = 21/309 (6%)

Query: 33  PSSTTTFKLCCALS-SNNAESSEPTSPEAQ-TGPVDPVKLAFNKAKTYKEESGKSNPGSG 90
           P++  T KLCC ++  NN ESSE  S EA+ T  VDP+KLAFNKAK YKE S KSN   G
Sbjct: 24  PTALKTTKLCCVMNKENNKESSEVNSIEAEKTASVDPIKLAFNKAKAYKE-SIKSNTDLG 82

Query: 91  IEQSDANGENSVNQGDAVDGRQKDLPVSLKIAMEKAKKYKQNKGVAIAETTQGLQGGRER 150
           IEQ+ A            DG +KD+ VS+KIAMEKAKKYKQNKGVA++ET QGLQGG E 
Sbjct: 83  IEQNSA------------DGGKKDVSVSVKIAMEKAKKYKQNKGVAVSETDQGLQGGSES 130

Query: 151 TLENSVGE----KEGKLSVSKIDFVGLDFGDKKKTRGLPPGLVPVTDSFSDGDLTEVEFI 206
           T   +V +    K+G+LSVSKIDFVGL F D KKTRGLPPGLVP +D FSD DL EVE I
Sbjct: 131 TWGENVNDNSVSKKGELSVSKIDFVGLGFADNKKTRGLPPGLVPFSDPFSDDDLPEVELI 190

Query: 207 VGDATKFDAVTD--PXXXXXXXXXXXLYKPTVSTWGVFPRPGNISKTFGGGRVIRPGEVL 264
           VGD   F+A T   P           LYKP VSTWGVFPRP NISKT+GGGR IRPGEVL
Sbjct: 191 VGDTNNFNATTTTAPQPEQTKDDESELYKPKVSTWGVFPRPNNISKTYGGGRTIRPGEVL 250

Query: 265 ETDEEKAMREVRTKQLLAAYKKRTGLDIDPKLKSECEEALKDGDLLMNAGKLKEALPYYE 324
           E +EEKA +E RTKQ+LAAYKK+ GL IDPKLK ECEEALKDGD LM+AGKLK+ALPYYE
Sbjct: 251 ENEEEKAAKEARTKQMLAAYKKKYGLSIDPKLKIECEEALKDGDFLMDAGKLKDALPYYE 310

Query: 325 KVMDKITFK 333
           KV+DK+ FK
Sbjct: 311 KVIDKLPFK 319