Miyakogusa Predicted Gene

Lj3g3v0129240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0129240.1 Non Characterized Hit- tr|D8LG59|D8LG59_ECTSI
Putative uncharacterized protein OS=Ectocarpus silicul,32.76,1e-18,no
description,NULL; seg,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL,CUFF.40308.1
         (278 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g102510.1 | D-glycerate 3-kinase | HC | chr2:44166453-4416...   382   e-106

>Medtr2g102510.1 | D-glycerate 3-kinase | HC |
           chr2:44166453-44161869 | 20130731
          Length = 430

 Score =  382 bits (981), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 178/215 (82%), Positives = 200/215 (93%)

Query: 57  TMFSKSGNGSSWLQNSSTAASIEYRKRPTYSAFPSTPAQVSSVQDLFEFICSGPLLDKLG 116
           T FSKSGNGSSWLQ+SSTA SI ++K P YS FPS+PAQVSSVQDL+EFICSGPLL K+G
Sbjct: 54  THFSKSGNGSSWLQSSSTADSIAHKKGPVYSVFPSSPAQVSSVQDLYEFICSGPLLYKIG 113

Query: 117 LTREKVAESIDNWITYGRRLCQIFQLNELFLTEPQKARLYHYYVPVFLWCEDQIAQHQSK 176
           LT EKVAESID W++YGR+LC++FQLNELFLTEPQK RLYHYY+PVFLWCE +IAQHQ+K
Sbjct: 114 LTPEKVAESIDKWLSYGRQLCRLFQLNELFLTEPQKVRLYHYYIPVFLWCESEIAQHQAK 173

Query: 177 FKDEKDIPPLVIGFSAPQGCGKTTVVFALDFLFRMNGRKSATISIDDFYLTAEGQNKLRE 236
           FKD++DIPPLVIGFSAPQGCGKTT+VFALD+LF+M GRKSATISIDDFYLTAEGQNKLRE
Sbjct: 174 FKDKEDIPPLVIGFSAPQGCGKTTLVFALDYLFQMIGRKSATISIDDFYLTAEGQNKLRE 233

Query: 237 AYPGNALLEYRGNAGSHDLALSIETLSALTKMTRE 271
           A PGNALLEYRGNAGSHDL  S+ETL+ALTKM+RE
Sbjct: 234 ANPGNALLEYRGNAGSHDLPFSVETLTALTKMSRE 268