Miyakogusa Predicted Gene
- Lj3g3v0129230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0129230.1 Non Characterized Hit- tr|I3SBK2|I3SBK2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.38,0,domain
present in cyclins, TFIIB and Retinob,Cyclin-like; seg,NULL;
Cyclin-like,Cyclin-like; SUBFAMI,CUFF.40307.1
(481 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g102520.1 | carboxy-terminal domain cyclin | HC | chr2:441... 608 e-174
Medtr2g102550.1 | carboxy-terminal domain cyclin | HC | chr2:441... 547 e-156
Medtr3g107970.1 | carboxy-terminal domain cyclin | HC | chr3:498... 346 3e-95
Medtr1g011470.1 | carboxy-terminal domain cyclin | HC | chr1:203... 318 8e-87
Medtr3g088415.1 | carboxy-terminal domain cyclin | HC | chr3:401... 281 1e-75
Medtr1g018680.1 | carboxy-terminal domain cyclin | HC | chr1:543... 262 6e-70
Medtr3g088405.1 | carboxy-terminal domain cyclin | HC | chr3:401... 260 3e-69
Medtr3g088415.2 | carboxy-terminal domain cyclin | HC | chr3:401... 236 3e-62
Medtr3g102530.1 | carboxy-terminal domain cyclin | HC | chr3:472... 223 3e-58
Medtr3g102520.1 | carboxy-terminal domain cyclin | HC | chr3:472... 219 4e-57
Medtr3g102510.1 | carboxy-terminal domain cyclin | HC | chr3:472... 214 2e-55
Medtr3g088415.3 | carboxy-terminal domain cyclin | HC | chr3:401... 208 8e-54
Medtr3g102540.1 | carboxy-terminal domain cyclin | LC | chr3:472... 200 3e-51
Medtr3g102560.1 | carboxy-terminal domain cyclin | HC | chr3:472... 198 8e-51
Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731 171 2e-42
Medtr5g088980.1 | carboxy-terminal domain cyclin | HC | chr5:386... 167 2e-41
Medtr5g023790.1 | carboxy-terminal domain cyclin | HC | chr5:947... 164 2e-40
Medtr8g074000.1 | carboxy-terminal domain cyclin | HC | chr8:312... 160 2e-39
Medtr5g023790.3 | carboxy-terminal domain cyclin | HC | chr5:947... 159 8e-39
Medtr5g023790.2 | carboxy-terminal domain cyclin | HC | chr5:947... 146 4e-35
Medtr3g060410.1 | carboxy-terminal domain cyclin | LC | chr3:236... 88 2e-17
Medtr3g060770.1 | carboxy-terminal domain cyclin | LC | chr3:241... 86 1e-16
Medtr3g061680.1 | carboxy-terminal domain cyclin | LC | chr3:246... 84 2e-16
Medtr3g060820.1 | carboxy-terminal domain cyclin | LC | chr3:241... 83 7e-16
Medtr3g460990.1 | carboxy-terminal domain cyclin | LC | chr3:240... 82 1e-15
Medtr3g060400.1 | carboxy-terminal domain cyclin | LC | chr3:236... 82 1e-15
Medtr1g032850.1 | carboxy-terminal domain cyclin | HC | chr1:117... 77 5e-14
Medtr5g044040.1 | amine-terminal domain cyclin | LC | chr5:19364... 65 2e-10
Medtr3g103080.1 | carboxy-terminal domain cyclin | HC | chr3:474... 64 3e-10
Medtr5g011900.1 | amine-terminal domain cyclin | LC | chr5:35020... 60 4e-09
Medtr3g100710.1 | carboxy-terminal domain cyclin | HC | chr3:463... 55 2e-07
Medtr4g080990.1 | carboxy-terminal domain cyclin | HC | chr4:312... 55 2e-07
Medtr5g015670.1 | carboxy-terminal domain cyclin | HC | chr5:546... 54 4e-07
Medtr5g032550.1 | carboxy-terminal domain cyclin | HC | chr5:139... 53 7e-07
Medtr1g107535.1 | carboxy-terminal domain cyclin | HC | chr1:488... 52 2e-06
Medtr5g032550.2 | carboxy-terminal domain cyclin | HC | chr5:139... 51 3e-06
>Medtr2g102520.1 | carboxy-terminal domain cyclin | HC |
chr2:44171841-44168809 | 20130731
Length = 479
Score = 608 bits (1569), Expect = e-174, Method: Compositional matrix adjust.
Identities = 323/484 (66%), Positives = 362/484 (74%), Gaps = 14/484 (2%)
Query: 5 NSVALKDGEVPXXXXXXXXXXXXXSGQLPPLKGVPQGIE--KQPLGANLKRAVSDNTCLP 62
N+V LK GEVP +GQLPP+K V G + KQPL AN KRAVSD T LP
Sbjct: 3 NNVTLKAGEVPSRLTRARAVALSTTGQLPPMKEVAPGTQNQKQPLRANSKRAVSDVTYLP 62
Query: 63 RKKRAVLQDVSNTCSESSYRSCFNATKNQAKKSKIAKPAQLNVPKVVPCVGGGLPRHQVD 122
KKRA+LQDV+N C E++ SC N T+ QAKK K+AKPAQ NV VP LP D
Sbjct: 63 HKKRAILQDVTNNCGENTNMSCLNPTEIQAKKRKVAKPAQSNVSNEVPS-AAELPPSIAD 121
Query: 123 SKAESLPQMGLRS-EDTMCSFNFEDNAFLRPSSKQCGTDDNMFDSQTSGISSYPLISQKK 181
SK S +M LRS ED C + ED+A R S+ QCGTD+N+ SQ S IS++P SQKK
Sbjct: 122 SKPVSSLEMRLRSSEDFRCLDDLEDSASFRMSANQCGTDNNLIQSQMSRISAWPSSSQKK 181
Query: 182 ASQTVAAKKSSLAELQNVSQDPDFTDIDADSEDPQLCGLYATDIYNNFRVAELSRRP--S 239
A KK +++EL +VS+ PD DIDAD EDPQLC YA DIY++ RVAELSRRP +
Sbjct: 182 A------KKGNISELLDVSKHPDVADIDADFEDPQLCSHYAADIYDHLRVAELSRRPYPN 235
Query: 240 FMETVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLG 299
FMETVQ+DIT SMRAILVDWLVEVSE YKL A+TLYLTVYLIDWFLSKN IER RLQLLG
Sbjct: 236 FMETVQQDITPSMRAILVDWLVEVSEGYKLQANTLYLTVYLIDWFLSKNCIERERLQLLG 295
Query: 300 ITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRR 359
ITCMLIASKYEE+NAPRIE+FCFITDNTYTKEEV+K+E+ VLKSS+YQLFAPTTKTFLRR
Sbjct: 296 ITCMLIASKYEEVNAPRIEDFCFITDNTYTKEEVVKLESLVLKSSSYQLFAPTTKTFLRR 355
Query: 360 FLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPW 419
FLRAAQAS K PS MNYGFLNFLPSMIAASAVFLARWTLDQSSHPW
Sbjct: 356 FLRAAQASYKRPSIELEYLANYLAELTLMNYGFLNFLPSMIAASAVFLARWTLDQSSHPW 415
Query: 420 NPTLQHYASYKPSDMKTTVLALQDLQLNI-DGCPL-TAIRTKYTQEKFKGVAALTSPKLL 477
NPTL+HYASYK SD+K TVLALQDLQLN D CPL AIR KY Q+K VA L+SPKLL
Sbjct: 416 NPTLEHYASYKASDLKATVLALQDLQLNSNDDCPLPAAIRKKYIQDKLNCVATLSSPKLL 475
Query: 478 ETLF 481
ET+F
Sbjct: 476 ETMF 479
>Medtr2g102550.1 | carboxy-terminal domain cyclin | HC |
chr2:44178430-44174949 | 20130731
Length = 429
Score = 547 bits (1410), Expect = e-156, Method: Compositional matrix adjust.
Identities = 297/484 (61%), Positives = 328/484 (67%), Gaps = 58/484 (11%)
Query: 1 MKKDNSVALKDGEVPXXXXXXXXXXXXXSGQLPPLKGVPQGIEKQPLGANLKRAVSDNTC 60
MKKD SV+ K GEVP +GQLPPLK V Q +K P GAN +RAVSD+TC
Sbjct: 1 MKKDKSVSSKAGEVPVRLTRARAAALSATGQLPPLKDVAQESQKHPQGANSERAVSDDTC 60
Query: 61 LPRKKRAVLQDVSNTCSESSYRSCFNATKNQAKKSKIAKPAQLNVPKVVPCVGGGLPRHQ 120
LPRKKRA L+DV+N QAKK+K+ KP QLNV VP V
Sbjct: 61 LPRKKRAALEDVTNIY--------------QAKKTKLTKPDQLNVSTEVPSVS------- 99
Query: 121 VDSKAESLPQMGLRSEDTMCSFNFEDNAFLRPSSKQCGTDDNMFDSQTSGISSYPLISQK 180
FEDNA PS N+ QTS S+ PLISQ
Sbjct: 100 -----------------------FEDNA---PS--------NLIGGQTSEPSAQPLISQA 125
Query: 181 KA-SQTVAAKKSSLAELQNVSQDPDFTDIDADSEDPQLCGLYATDIYNNFRVAELSRRP- 238
KA SQT AAKK S ++L N +DPD +IDAD EDPQLC YA DIY+N RVAELSRRP
Sbjct: 126 KAASQTDAAKKDSDSKLLNAPKDPDIPNIDADIEDPQLCSFYAADIYDNLRVAELSRRPH 185
Query: 239 -SFMETVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQL 297
+FMETVQRDIT MRAIL+DWLVEVSE++ L A+TLYLTVYLIDWFLSKN IE RLQL
Sbjct: 186 PNFMETVQRDITPGMRAILIDWLVEVSEQFNLQANTLYLTVYLIDWFLSKNSIEIKRLQL 245
Query: 298 LGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFL 357
LGITCMLIASKYEEINA IE+FC +TDNTYT+EEVL ME +VLKSSAYQL APTTK FL
Sbjct: 246 LGITCMLIASKYEEINANHIEDFCVMTDNTYTREEVLNMEIQVLKSSAYQLSAPTTKHFL 305
Query: 358 RRFLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSH 417
RRFLRAAQAS + PS MNYGFLNF PSMIAASAVFLARWTLDQS H
Sbjct: 306 RRFLRAAQASYQRPSVELEYLANYLAELTLMNYGFLNFFPSMIAASAVFLARWTLDQSRH 365
Query: 418 PWNPTLQHYASYKPSDMKTTVLALQDLQLNIDGCPLTAIRTKYTQEKFKGVAALTSPKLL 477
PWNPTL+HYASYK SD+K TVLALQ+LQLN D CP AIRTKY Q KF GVA L+SP L
Sbjct: 366 PWNPTLEHYASYKASDLKATVLALQNLQLNSDDCPYPAIRTKYRQSKFHGVAVLSSPTLP 425
Query: 478 ETLF 481
ET+F
Sbjct: 426 ETMF 429
>Medtr3g107970.1 | carboxy-terminal domain cyclin | HC |
chr3:49887211-49892757 | 20130731
Length = 478
Score = 346 bits (887), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 171/279 (61%), Positives = 203/279 (72%), Gaps = 3/279 (1%)
Query: 205 FTDIDADSEDPQLCGLYATDIYNNFRVAELSRRPS--FMETVQRDITQSMRAILVDWLVE 262
F DID D Q+ YA DIY RV+EL +RPS +ME +Q+DI+ SMR IL+DWLVE
Sbjct: 197 FVDIDKKLMDSQIWSAYAPDIYTKVRVSELEKRPSTNYMEKLQQDISPSMRGILIDWLVE 256
Query: 263 VSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCF 322
VSEEYKL DTLYLTV LID FLS + I++ RLQLLG+TCM IASKYEE+ APR+EEFCF
Sbjct: 257 VSEEYKLVPDTLYLTVNLIDRFLSTSLIQKHRLQLLGVTCMFIASKYEEMCAPRVEEFCF 316
Query: 323 ITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXX 382
ITDNTYTKEEV+KME EVL +QL PTTKTF+RRF++AAQ+S K P
Sbjct: 317 ITDNTYTKEEVVKMEKEVLNLLRFQLSVPTTKTFIRRFIQAAQSSYKVPLAELEFLANYL 376
Query: 383 XXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQ 442
+ Y FL FLPS +AASAVFLARWTL+ S HPW TL+H+ +YK S++K VLAL+
Sbjct: 377 AELTLVEYSFLQFLPSRVAASAVFLARWTLNHSEHPWTTTLEHFTNYKASELKPVVLALE 436
Query: 443 DLQLNIDGCPLTAIRTKYTQEKFKGVAALTSPKLLETLF 481
DLQLN GC L AIR KY EKF GVA L SPK +++LF
Sbjct: 437 DLQLNTKGCSLHAIREKYKHEKFNGVAKL-SPKPVQSLF 474
>Medtr1g011470.1 | carboxy-terminal domain cyclin | HC |
chr1:2038488-2033308 | 20130731
Length = 422
Score = 318 bits (815), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 170/329 (51%), Positives = 211/329 (64%), Gaps = 20/329 (6%)
Query: 172 SSYPLISQKKASQTVAAKKSSLAELQNVSQDPD-----------------FTDIDADSED 214
SS +++K++ Q + ++SL +Q+ P+ DID+ D
Sbjct: 95 SSTSTMTKKESLQVQPSVENSLLSMQDTLNSPNTEINLICEKLSASVGLGIVDIDSKLRD 154
Query: 215 PQLCGLYATDIYNNFRVAELSRRP--SFMETVQRDITQSMRAILVDWLVEVSEEYKLGAD 272
+ YA DIY N V E RRP ++MET+Q+DIT MR ILVDWLVEV++E+KL D
Sbjct: 155 SPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEVADEFKLVPD 214
Query: 273 TLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEE 332
TLYL V LID FLS+ I + RLQLLGITCMLI+SKYEEI AP +E+FC ITDNTY+++E
Sbjct: 215 TLYLAVNLIDRFLSQRLITKRRLQLLGITCMLISSKYEEICAPGVEDFCVITDNTYSRQE 274
Query: 333 VLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGF 392
VLKME EVL +QL PT KTFLRRF++ AQ SSK + Y F
Sbjct: 275 VLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANYLAELALVEYSF 334
Query: 393 LNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQDLQLNIDGCP 452
L F PS IAAS+V LARWTL+QS HPWNPTL+HY +YK S++KTTVL L DLQLN C
Sbjct: 335 LQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLELIDLQLNTKRCR 394
Query: 453 LTAIRTKYTQEKFKGVAALTSPKLLETLF 481
L A+R KY +KF VA L SPK +E LF
Sbjct: 395 LNAVREKYQHQKFNSVANL-SPKPVEYLF 422
>Medtr3g088415.1 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40182656 | 20130731
Length = 505
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/267 (52%), Positives = 178/267 (66%), Gaps = 2/267 (0%)
Query: 205 FTDIDADSEDPQLCGLYATDIYNNFRVAELSRRPS--FMETVQRDITQSMRAILVDWLVE 262
+ID D DPQLC +A DIY + R +E +RPS FME +Q+DI SMRAIL+DWLVE
Sbjct: 224 IVNIDNDYMDPQLCATFACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVE 283
Query: 263 VSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCF 322
V+EEY+L DTLYLTV ID +LS N + R +LQLLG+ M+IASKYEEI AP++EEFC+
Sbjct: 284 VAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCY 343
Query: 323 ITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXX 382
ITDNTY K+EVL+ME+ VL +++ APT K FLRRF+RAAQ + PS
Sbjct: 344 ITDNTYFKDEVLQMESTVLNFLKFEMTAPTIKCFLRRFVRAAQGIDEVPSLQLECLTNFI 403
Query: 383 XXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQ 442
+ Y L + PS+IAAS++FLA++ L + PWNPTLQHY Y+PSD+ V L
Sbjct: 404 AELSLLEYSMLCYAPSLIAASSIFLAKYMLFPAMKPWNPTLQHYTQYQPSDLCACVKDLH 463
Query: 443 DLQLNIDGCPLTAIRTKYTQEKFKGVA 469
L N L AI+ KY Q K+K VA
Sbjct: 464 RLCCNSPNSNLPAIKEKYNQHKYKYVA 490
>Medtr1g018680.1 | carboxy-terminal domain cyclin | HC |
chr1:5434143-5436837 | 20130731
Length = 363
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 133/266 (50%), Positives = 169/266 (63%), Gaps = 4/266 (1%)
Query: 213 EDPQLCGLYATDIYNNFRVAEL--SRRP--SFMETVQRDITQSMRAILVDWLVEVSEEYK 268
EDPQLC Y +DIY+ R E+ S+RP +++ VQRD+ SMR +LVDWLVEV+EEYK
Sbjct: 83 EDPQLCETYVSDIYDYLRNMEVDSSKRPLCDYIQKVQRDVNASMRGVLVDWLVEVAEEYK 142
Query: 269 LGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTY 328
L +DTLY +V ID FLS N + R +LQLLG+ ML+ASKYEEI P +E+FC+ITDNTY
Sbjct: 143 LVSDTLYFSVSYIDRFLSLNDLTRQKLQLLGVASMLVASKYEEIKPPEVEDFCYITDNTY 202
Query: 329 TKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXXXXXM 388
+KEEVL ME ++LKS ++L PT KTFLR S +
Sbjct: 203 SKEEVLTMEADILKSLKFELGGPTIKTFLRHVCFIDYVSLYASELQFEFLCSYLAELSLL 262
Query: 389 NYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQDLQLNI 448
+Y + FLPSM+AAS VFLAR+ L +HPWN + + YKP+D+K VL + DL L
Sbjct: 263 DYNCVKFLPSMVAASVVFLARFMLSPKTHPWNSAIYEFTRYKPADLKECVLNIHDLYLGR 322
Query: 449 DGCPLTAIRTKYTQEKFKGVAALTSP 474
G L A+R KY Q KFK VA SP
Sbjct: 323 KGGSLQAVRDKYKQHKFKCVATTPSP 348
>Medtr3g088405.1 | carboxy-terminal domain cyclin | HC |
chr3:40170176-40175369 | 20130731
Length = 510
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 182/279 (65%), Gaps = 4/279 (1%)
Query: 200 SQDPDFTDIDADSEDPQLCGLYATDIYNNFRVAELSRRPS--FMETVQRDITQSMRAILV 257
S+ +F DID +++DPQ C +A +IY N RV+E +RPS +ME +Q+ I SMRA+L+
Sbjct: 222 SRANEFVDIDRNTKDPQFCASFAHEIYENLRVSEKFKRPSMDYMEKIQKKINASMRAMLI 281
Query: 258 DWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRI 317
DWLVEV++EY+L DTL+L V +D +LS + +LQLLG+TCM+IA+KYEEI AP++
Sbjct: 282 DWLVEVADEYRLLPDTLFLAVNYLDRYLSGKAMNTQQLQLLGVTCMMIAAKYEEICAPKV 341
Query: 318 EEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXX 377
EEFC++TDNTY+KE+VL+ME+ VL +++ APT + FLRRF+ AQ + + P
Sbjct: 342 EEFCYVTDNTYSKEQVLEMESSVLNFLKFEMTAPTIRCFLRRFITVAQQTCEIPLMQLEY 401
Query: 378 XXXXXXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTT 437
+ Y L + PS+IAASA FLA++ L + +PWN L+HY Y+ S+++
Sbjct: 402 LADYVADLSLLEYDMLKYTPSLIAASATFLAKYILLSTKNPWNSMLRHYTGYQASELREC 461
Query: 438 VLALQDLQLN-IDGCP-LTAIRTKYTQEKFKGVAALTSP 474
V L L N P +TAIR KY+Q KFK A P
Sbjct: 462 VEGLHLLYRNGYHSSPSITAIREKYSQHKFKFAAKKCCP 500
>Medtr3g088415.2 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40182268 | 20130731
Length = 443
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 149/217 (68%), Gaps = 2/217 (0%)
Query: 205 FTDIDADSEDPQLCGLYATDIYNNFRVAELSRRPS--FMETVQRDITQSMRAILVDWLVE 262
+ID D DPQLC +A DIY + R +E +RPS FME +Q+DI SMRAIL+DWLVE
Sbjct: 224 IVNIDNDYMDPQLCATFACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVE 283
Query: 263 VSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCF 322
V+EEY+L DTLYLTV ID +LS N + R +LQLLG+ M+IASKYEEI AP++EEFC+
Sbjct: 284 VAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCY 343
Query: 323 ITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXX 382
ITDNTY K+EVL+ME+ VL +++ APT K FLRRF+RAAQ + PS
Sbjct: 344 ITDNTYFKDEVLQMESTVLNFLKFEMTAPTIKCFLRRFVRAAQGIDEVPSLQLECLTNFI 403
Query: 383 XXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPW 419
+ Y L + PS+IAAS++FLA++ L + PW
Sbjct: 404 AELSLLEYSMLCYAPSLIAASSIFLAKYMLFPAMKPW 440
>Medtr3g102530.1 | carboxy-terminal domain cyclin | HC |
chr3:47254814-47252673 | 20130731
Length = 352
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 169/279 (60%), Gaps = 5/279 (1%)
Query: 203 PDFTDIDADSEDPQLCGLYATDIYNNFRVAEL--SRRP--SFMETVQRDITQSMRAILVD 258
PDF+ I+A S+ ++ YA+DI N R E+ RRP ++E VQR +T +MR ILVD
Sbjct: 66 PDFSKINAKSDYEEIFESYASDISNYLRTMEVQKKRRPMIGYIEKVQRGVTANMRGILVD 125
Query: 259 WLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIE 318
WLVEV+EEYKL TL+L V ID FLS + R +LQLLG++ MLIASKYEEI+ P+
Sbjct: 126 WLVEVAEEYKLLPQTLHLAVSYIDRFLSNESVNRSKLQLLGVSSMLIASKYEEISPPKAV 185
Query: 319 EFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXX 378
+FC ITDNTY ++V+KME ++LKS +++ P TFL+ ++ A K
Sbjct: 186 DFCQITDNTYELKQVIKMEADILKSLNFEMGNPHVNTFLKEYIGPATEDLKTSKLQMEFL 245
Query: 379 XXXXXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTV 438
++Y + FLPSM+AAS +FLAR+ + HP +L YK ++++ V
Sbjct: 246 CNYLAELSLIDYECIRFLPSMVAASVIFLARFIICPGVHPLTSSLSECLFYKSAELEECV 305
Query: 439 LALQDLQLNIDGCPLTAIRTKYTQEKFKGVAAL-TSPKL 476
L L DL L L A+R KY Q KFK VA L +SP++
Sbjct: 306 LILHDLYLVRRAASLKAVREKYKQHKFKNVANLPSSPEI 344
>Medtr3g102520.1 | carboxy-terminal domain cyclin | HC |
chr3:47250517-47247642 | 20130731
Length = 372
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 170/284 (59%), Gaps = 5/284 (1%)
Query: 203 PDFTDIDADSEDPQLCGLYATDIYNNFRVAELS--RRP--SFMETVQRDITQSMRAILVD 258
P T I+A ++ + Y +DI + R E+ RRP ++E VQR I+ +MR LVD
Sbjct: 73 PVHTKINAKRDNQHIIQPYVSDISDYLRTMEMQKKRRPMVGYLENVQRGISSNMRGTLVD 132
Query: 259 WLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIE 318
WLVEV++EYKL +TL+L+V ID FLS + R +LQLLG++ MLIASKYEEI P+
Sbjct: 133 WLVEVADEYKLLPETLHLSVSYIDRFLSIEPVSRSKLQLLGVSSMLIASKYEEITPPKAV 192
Query: 319 EFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXX 378
+FC ITDNTY EEVLKME ++LKS +++ P TFL+RF+ A + KN +
Sbjct: 193 DFCQITDNTYDLEEVLKMEADILKSLNFEMGNPNVITFLKRFIGIACENRKNSNLQFEFL 252
Query: 379 XXXXXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTV 438
++Y FLPS++AAS +FLAR+ + +HPW P+L Y ++++ V
Sbjct: 253 CSYLADLSLLDYECTRFLPSVVAASVIFLARFIIRPGAHPWTPSLCECLGYTSANLEDCV 312
Query: 439 LALQDLQLNIDGCPLTAIRTKYTQEKFKGVAAL-TSPKLLETLF 481
+ L DL ++ A+R KY Q K K VA L +SP++ F
Sbjct: 313 IILHDLYMSRKAGSFKAVRDKYKQNKLKCVANLPSSPEIPNHYF 356
>Medtr3g102510.1 | carboxy-terminal domain cyclin | HC |
chr3:47243553-47241418 | 20130731
Length = 340
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/259 (44%), Positives = 160/259 (61%), Gaps = 3/259 (1%)
Query: 221 YATDIYNNFRVAELSRRPSF--METVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTV 278
Y +DI++ + E RRP F ME VQR IT +MR LVDWLVEV++EY L +TL+L+V
Sbjct: 74 YVSDIFDYLQTMEKKRRPMFGYMENVQRGITSNMRGTLVDWLVEVADEYTLLPETLHLSV 133
Query: 279 YLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMET 338
ID FLS I R +LQLLG++ MLIASKYEEI P+ +FC ITDNTY +EVLKME
Sbjct: 134 SYIDRFLSNQPIIRSKLQLLGVSSMLIASKYEEITPPKAIDFCQITDNTYDLDEVLKMEA 193
Query: 339 EVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLPS 398
++LK+ +++ P TFL+ F+ A + K + ++Y + F+PS
Sbjct: 194 DILKTLNFEMGNPNVITFLKSFVGIASENQKTSNLQFEYLCNYLADISLLDYECIRFMPS 253
Query: 399 MIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQDLQLNIDGCPLTAIRT 458
++AAS +FLAR+ L HPW +L YK ++++ V+ L DL L+ A+R
Sbjct: 254 IVAASVIFLARFILRPGVHPWTSSLCECLGYKSAELEECVMILHDLYLSRRAASFKAVRE 313
Query: 459 KYTQEKFKGVAAL-TSPKL 476
KY Q+KFK VA L +SP++
Sbjct: 314 KYKQQKFKYVANLPSSPEI 332
>Medtr3g088415.3 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40181795 | 20130731
Length = 397
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 99/164 (60%), Positives = 124/164 (75%), Gaps = 2/164 (1%)
Query: 205 FTDIDADSEDPQLCGLYATDIYNNFRVAELSRRPS--FMETVQRDITQSMRAILVDWLVE 262
+ID D DPQLC +A DIY + R +E +RPS FME +Q+DI SMRAIL+DWLVE
Sbjct: 224 IVNIDNDYMDPQLCATFACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVE 283
Query: 263 VSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCF 322
V+EEY+L DTLYLTV ID +LS N + R +LQLLG+ M+IASKYEEI AP++EEFC+
Sbjct: 284 VAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCY 343
Query: 323 ITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQA 366
ITDNTY K+EVL+ME+ VL +++ APT K FLRRF+RAAQ
Sbjct: 344 ITDNTYFKDEVLQMESTVLNFLKFEMTAPTIKCFLRRFVRAAQG 387
>Medtr3g102540.1 | carboxy-terminal domain cyclin | LC |
chr3:47258291-47259784 | 20130731
Length = 277
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/255 (45%), Positives = 153/255 (60%), Gaps = 12/255 (4%)
Query: 225 IYNNFRVAELS--RRP--SFMETVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYL 280
IY R EL RRP +ME +QR IT +R LVDWLVEV+EEYKL DTL+L V
Sbjct: 13 IYTYLRSMELEEKRRPMKDYMEILQRYITPELRGKLVDWLVEVAEEYKLHNDTLHLAVSY 72
Query: 281 IDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEV 340
ID FLS + I R L+LLG++ IASKYE+I P++++ CF T + + KEEV +ME ++
Sbjct: 73 IDIFLSSHPIRRINLELLGVSSFYIASKYEDITPPQVQDLCFTTRDKFNKEEVQEMENKI 132
Query: 341 LKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXX-XXXXXXXMNYGFLNFLPSM 399
LK+ + L PT TFLR Q S+K+ S ++Y L+FLPS+
Sbjct: 133 LKTLDFDLSNPTVMTFLR------QESAKSDSYLQFEFLTNYLAELSLLDYDCLSFLPSL 186
Query: 400 IAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQDLQLNIDGCPLTAIRTK 459
+AAS VFLAR S PW TLQ Y+ YKP +++ VL L DL + G AIRTK
Sbjct: 187 VAASVVFLARIIFWPKSLPW-ATLQEYSEYKPVELRECVLVLHDLHTSEKGASFKAIRTK 245
Query: 460 YTQEKFKGVAALTSP 474
Y Q +F+ VA L+SP
Sbjct: 246 YKQHEFEYVADLSSP 260
>Medtr3g102560.1 | carboxy-terminal domain cyclin | HC |
chr3:47265371-47267354 | 20130731
Length = 324
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 157/256 (61%), Gaps = 9/256 (3%)
Query: 226 YNNFRVAELS--RRP--SFMETVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLI 281
YN R E+ RRP +M+ VQRDI MR IL+DWLVEV EEYKL DTL+ V I
Sbjct: 69 YNYLRSIEMETKRRPMKDYMDIVQRDIDPKMRGILIDWLVEVVEEYKLQNDTLHRAVSYI 128
Query: 282 DWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVL 341
D FLS I R +LQLLG++ M IASKYE+IN P +EE CFITDNTY ++EVL+MET++L
Sbjct: 129 DRFLSYYPICRVKLQLLGVSSMYIASKYEDINPPHVEELCFITDNTYNRDEVLEMETDIL 188
Query: 342 KSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIA 401
K+ L +PT KTFLR+ A+++S + ++Y + FLPS++A
Sbjct: 189 KTLDNDLGSPTVKTFLRQ--EIAKSAS---NLQFEFLSNYLAELSLLDYACVRFLPSLVA 243
Query: 402 ASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQDLQLNIDGCPLTAIRTKYT 461
AS LAR+ + ++PW LQ Y+ YKP ++K VL L DL ++ A R KY
Sbjct: 244 ASITLLARFIVWPKTYPWPSALQEYSGYKPVELKECVLILHDLYMSRREGSFEATREKYK 303
Query: 462 QEKFKGVAALTSPKLL 477
Q K+K VA L SP L
Sbjct: 304 QYKYKYVANLPSPPHL 319
>Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731
Length = 1318
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 168/323 (52%), Gaps = 24/323 (7%)
Query: 178 SQKKASQTVA----AKKSSLAELQNVSQDPDFTDIDADSEDPQLCGL-YATDIYNNFRVA 232
S+KK S+T++ A+ + L N + + DIDA + +L + Y DIY +++
Sbjct: 153 SKKKPSRTLSSVLTARSKAACGLTN--KPKEIVDIDAGDTNNELAAVEYLEDIYKFYKIV 210
Query: 233 ELSRRPSFMETVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIER 292
E RP Q +I + MR IL+DWLV+V +++L +TLYLT+ ++D FL+ N + R
Sbjct: 211 ENESRPHDYMDSQPEINERMRGILIDWLVDVHSKFELSPETLYLTINIVDRFLAVNLVSR 270
Query: 293 PRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPT 352
LQL+GI+ ML+ASKYEEI P + +F ++D Y+ E++L ME +L + L PT
Sbjct: 271 RELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYSHEQILIMEKTILGKLEWTLTVPT 330
Query: 353 TKTFLRRFLRAAQASSKNPSXXXXXXXXXX--XXXXXMNYGFLNFLPSMIAASAVFLARW 410
FL RF++AA S+ PS M+Y L + PSM+AASAV+ AR
Sbjct: 331 PFVFLVRFIKAASVSAV-PSDQGDLEMMAHFLSELGMMHYATLRYCPSMLAASAVYAARS 389
Query: 411 TLDQSSHPWNPTLQHYASYKPSDMKTTVLALQDLQLNIDGCPLTAIRTKYTQEKFKGVAA 470
TL ++ WN TL+ + Y + L + L + KY+ + VAA
Sbjct: 390 TLSKTP-VWNETLKMHTGYSEEQLMDCARLLVSFHSGAENGKLKVVYKKYSDPQKGAVAA 448
Query: 471 -------------LTSPKLLETL 480
L+SP++LE +
Sbjct: 449 LPPAKNLLLPAARLSSPQILELI 471
>Medtr5g088980.1 | carboxy-terminal domain cyclin | HC |
chr5:38636983-38633820 | 20130731
Length = 421
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 150/279 (53%), Gaps = 8/279 (2%)
Query: 204 DFTD-IDADSEDPQLCGL-YATDIYNNFRVAELSRRPSFMETVQRDITQSMRAILVDWLV 261
DF + IDA ++ +L Y DIY ++++E R Q DI MRAIL+DWL+
Sbjct: 146 DFVENIDASDKENELAATEYIDDIYKYYKLSEDDVRVHDYMASQPDINVKMRAILIDWLI 205
Query: 262 EVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFC 321
EV +++L +T YLT+ ++D FLS + R LQL+GI+ MLIASKYEEI AP + +F
Sbjct: 206 EVHRKFELMPETFYLTLNIVDRFLSTKAVPRKELQLVGISSMLIASKYEEIWAPEVNDFV 265
Query: 322 FITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXX 381
I+DN Y +E+VL ME +L++ + L PT FL R+++A+ S K
Sbjct: 266 CISDNAYVREQVLVMEKTILRNLEWYLTVPTPYVFLVRYIKASTPSDKE----MESMVNF 321
Query: 382 XXXXXXMNYGFL-NFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLA 440
M+Y + ++ PSMIAASAV+ AR TL++S W TL+HY Y ++
Sbjct: 322 LAELSMMHYATVSSYCPSMIAASAVYAARSTLERSPF-WTDTLKHYTGYSEEQLRDCAKL 380
Query: 441 LQDLQLNIDGCPLTAIRTKYTQEKFKGVAALTSPKLLET 479
+ L AI K+ VA +T K L +
Sbjct: 381 MASFHSAAPESRLRAIYKKFCSSDRCAVALMTPAKNLSS 419
>Medtr5g023790.1 | carboxy-terminal domain cyclin | HC |
chr5:9472333-9468437 | 20130731
Length = 428
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 149/279 (53%), Gaps = 11/279 (3%)
Query: 194 AELQNVSQDPDFTDIDA-DSEDPQLCGLYATDIYNNFRVAELSR--RPSFMETVQRDITQ 250
E++++ ++P DID D+ DP Y D+Y+ +R E + P++M Q DI +
Sbjct: 145 VEMEDIMEEP-VMDIDTPDANDPLAVAEYIEDLYSYYRKVESTGCVSPNYMAQ-QFDINE 202
Query: 251 SMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYE 310
MRAILVDWL+EV +++ L +TL+LTV LID FL K + R +LQL+G+ ML+A KYE
Sbjct: 203 RMRAILVDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYE 262
Query: 311 EINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKN 370
E++ P + + I+D YT++EVL+ME ++ + + + PT F+RRFL+AAQA K
Sbjct: 263 EVSVPVVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFLKAAQADRK- 321
Query: 371 PSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYK 430
+ Y L F PS +AA+AV+ A+ T+ W+ T + + +Y
Sbjct: 322 ----LELLAFFLIELSLVEYAMLKFPPSQLAAAAVYTAQCTM-YGVKQWSKTCEWHTNYS 376
Query: 431 PSDMKTTVLALQDLQLNIDGCPLTAIRTKYTQEKFKGVA 469
+ + D LT KY KF A
Sbjct: 377 EDQLLECSSLMVDFHKKAGTGKLTGAHRKYGTSKFSYTA 415
>Medtr8g074000.1 | carboxy-terminal domain cyclin | HC |
chr8:31292669-31296642 | 20130731
Length = 434
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 143/266 (53%), Gaps = 10/266 (3%)
Query: 207 DIDA-DSEDPQLCGLYATDIYNNFRVAEL--SRRPSFMETVQRDITQSMRAILVDWLVEV 263
DID+ D+ + Y D++ +R E P++M+ Q D+ + MRAILVDWL+EV
Sbjct: 161 DIDSCDANNSLAVVEYIEDLHAYYRKIEYLGCVSPAYMDE-QLDLNERMRAILVDWLIEV 219
Query: 264 SEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCFI 323
+++ L +TL+LTV LID FL+K + R +LQL+G+ ML+A KYEE++ P + + I
Sbjct: 220 HDKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLVGLVAMLLACKYEEVSVPVVSDLIHI 279
Query: 324 TDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXX 383
D YT++++L+ME +L + Y + PT F+RRFL+AAQA K
Sbjct: 280 ADRAYTRKDILEMEKSMLNTLQYNMSLPTAYVFMRRFLKAAQADKK-----LELVAFFLV 334
Query: 384 XXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQD 443
+ Y L F PS++AA+AV+ A+ T+ H WN T + + +Y + + +
Sbjct: 335 ELSLVEYEMLKFPPSLVAAAAVYTAQCTVSGFKH-WNKTCEWHTNYSEDQLLECSMLMVG 393
Query: 444 LQLNIDGCPLTAIRTKYTQEKFKGVA 469
LT + KY KF A
Sbjct: 394 FHQKAGAGKLTGVHRKYGSAKFSFTA 419
>Medtr5g023790.3 | carboxy-terminal domain cyclin | HC |
chr5:9472324-9468202 | 20130731
Length = 381
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 139/239 (58%), Gaps = 11/239 (4%)
Query: 194 AELQNVSQDPDFTDIDA-DSEDPQLCGLYATDIYNNFRVAELSR--RPSFMETVQRDITQ 250
E++++ ++P DID D+ DP Y D+Y+ +R E + P++M Q DI +
Sbjct: 145 VEMEDIMEEP-VMDIDTPDANDPLAVAEYIEDLYSYYRKVESTGCVSPNYMAQ-QFDINE 202
Query: 251 SMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYE 310
MRAILVDWL+EV +++ L +TL+LTV LID FL K + R +LQL+G+ ML+A KYE
Sbjct: 203 RMRAILVDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYE 262
Query: 311 EINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKN 370
E++ P + + I+D YT++EVL+ME ++ + + + PT F+RRFL+AAQA K
Sbjct: 263 EVSVPVVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFLKAAQADRK- 321
Query: 371 PSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASY 429
+ Y L F PS +AA+AV+ A+ T+ W+ T + + +Y
Sbjct: 322 ----LELLAFFLIELSLVEYAMLKFPPSQLAAAAVYTAQCTM-YGVKQWSKTCEWHTNY 375
>Medtr5g023790.2 | carboxy-terminal domain cyclin | HC |
chr5:9472324-9468437 | 20130731
Length = 357
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 115/179 (64%), Gaps = 5/179 (2%)
Query: 194 AELQNVSQDPDFTDIDA-DSEDPQLCGLYATDIYNNFRVAELSR--RPSFMETVQRDITQ 250
E++++ ++P DID D+ DP Y D+Y+ +R E + P++M Q DI +
Sbjct: 145 VEMEDIMEEP-VMDIDTPDANDPLAVAEYIEDLYSYYRKVESTGCVSPNYMAQ-QFDINE 202
Query: 251 SMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYE 310
MRAILVDWL+EV +++ L +TL+LTV LID FL K + R +LQL+G+ ML+A KYE
Sbjct: 203 RMRAILVDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYE 262
Query: 311 EINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSK 369
E++ P + + I+D YT++EVL+ME ++ + + + PT F+RRFL+AAQA K
Sbjct: 263 EVSVPVVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFLKAAQADRK 321
>Medtr3g060410.1 | carboxy-terminal domain cyclin | LC |
chr3:23691060-23693543 | 20130731
Length = 362
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 9/215 (4%)
Query: 252 MRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIE---RPRLQLLGITCMLIASK 308
+R +VDWL++ + KL +TLYL V ++D LSK E +L+L+G++ +L+ASK
Sbjct: 135 LRKNVVDWLIQTHYQQKLMPETLYLCVNILDRVLSKINFEVKTMEKLKLIGLSSLLLASK 194
Query: 309 YEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASS 368
YE+ A + + ++ D Y EE+ +ME +L+ + L PT FL R +RA S
Sbjct: 195 YEQRRAVGVYDVEYLADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVRNIRACNLSD 254
Query: 369 KNPSXXXXXXXXXXXXXXXMNYGFL-NFLPSMIAASAVFLARWTLDQSSHP-WNPTLQHY 426
++ N+ + ++ PSMIAA AV+LAR+ + + +P W+ L+
Sbjct: 255 EDK--IMEHMVFFFSELSLTNHSIVCDYKPSMIAACAVYLARFIVGR--YPFWSNDLKMC 310
Query: 427 ASYKPSDMKTTVLALQDLQLNIDGCPLTAIRTKYT 461
Y + + + + + I G + + K++
Sbjct: 311 TGYSEDKLLSCAHVMMESCIQICGEGIMEVFMKFS 345
>Medtr3g060770.1 | carboxy-terminal domain cyclin | LC |
chr3:24109546-24108680 | 20130731
Length = 288
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 118/237 (49%), Gaps = 14/237 (5%)
Query: 221 YATDIYNNFRVAELSRRPSFMETVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYL 280
Y D+Y + + E R + + + MR I+VDWL++ + KL +TLYL V +
Sbjct: 32 YDDDLYKFYHIEESQIRAN---SKGFKVDFLMRKIVVDWLIQTHYKQKLMPETLYLCVNI 88
Query: 281 IDWFLSKNYIE---RPRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKME 337
+D FLSK E +L+L+G++ +L+ASKYE+ + + + + D Y +E+ +ME
Sbjct: 89 LDRFLSKIEFEVTTMDKLKLMGLSSLLLASKYEQRSVVGVYDIEGMADYIYMPKEICQME 148
Query: 338 TEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFL-NFL 396
+L+ + L PT FL R +R S ++ N+ + ++
Sbjct: 149 KLILQELGWILTVPTPYVFLIRNIRTCLLSDEDKIMEKMVFFFSELSLT--NHSIVCDYK 206
Query: 397 PSMIAASAVFLARWTLDQSSHP-WNPTLQHYASYKPSDMKTTVLALQD--LQLNIDG 450
PSMIAA +V+ AR+ +++ +P W+ L+ Y + + + D +Q+ DG
Sbjct: 207 PSMIAACSVYCARFVVER--YPFWSNDLKMCTGYSEDKLLSCASVMMDSCIQICRDG 261
>Medtr3g061680.1 | carboxy-terminal domain cyclin | LC |
chr3:24614151-24614996 | 20130731
Length = 281
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 10/213 (4%)
Query: 221 YATDIYNNFRVAELSRRPSFMETVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYL 280
Y D+Y + + E R + + + MR +VDWL++ E KL +TLYL V +
Sbjct: 22 YDDDLYKFYHLEESQIRAN---SKGFKVDFQMRMNVVDWLIQTHYEQKLMPETLYLCVNI 78
Query: 281 IDWFLSKNYIE---RPRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKME 337
+D LSK E +L+L+G++ +L+ASKYE+ +A + + ++ D Y EE+ +ME
Sbjct: 79 LDRVLSKIKFEVTTMDKLKLIGLSSLLLASKYEQRSAVGVYDVEYMADYIYMPEEICQME 138
Query: 338 TEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLP 397
+L+ + L PT FL R +RA S ++ + ++ P
Sbjct: 139 KLILQELGWILTVPTPYVFLVRNMRACLLSDQDKIMENMVFFFSELSLTNQSI-VCDYKP 197
Query: 398 SMIAASAVFLARWTLDQSSHP-WNPTLQHYASY 429
SMIAA +V+ AR+ + + +P W+ L+ Y
Sbjct: 198 SMIAACSVYCARFVVGR--YPFWSNDLKMCTGY 228
>Medtr3g060820.1 | carboxy-terminal domain cyclin | LC |
chr3:24117223-24116390 | 20130731
Length = 277
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 199 VSQDPDFTDIDADSEDPQLCGLYATDIYNNFRVAELSRRPSFMETVQRDITQSMRAILVD 258
+S++ FTD Y D+Y + + E R + + + MR +VD
Sbjct: 13 ISKEKKFTD-------------YDDDLYKFYHLEESQIRAN---SKGFKVDFQMRKNVVD 56
Query: 259 WLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERP---RLQLLGITCMLIASKYEEINAP 315
WL++ E KL +TLYL V ++D LSK E +L+L+G++ +L+ASKYE+ +
Sbjct: 57 WLIQTHYEQKLMPETLYLCVNVLDRVLSKIKFEVTTVDKLKLIGLSSLLLASKYEQRSVV 116
Query: 316 RIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXX 375
+ + ++ D Y EE+ +ME +L+ + L PT FL R +RA S ++
Sbjct: 117 GVYDVEYMADYIYMPEEICQMEKLILQKLGWILTVPTPYVFLVRNIRACLLSDEDK--IM 174
Query: 376 XXXXXXXXXXXXMNYGFL-NFLPSMIAASAVFLARWTLDQSSHP-WNPTLQHYASYKPSD 433
N+ + ++ PS+IAA +V+ AR+ +++ +P W+ L+ Y +
Sbjct: 175 ENMVFFFSEVSLTNHSIVCDYKPSLIAACSVYCARFVVER--YPFWSNDLKICTGYSEEN 232
Query: 434 MKTT--VLALQDLQLNIDG 450
+ + V+ +Q+ DG
Sbjct: 233 LWSCANVMMKSCIQICGDG 251
>Medtr3g460990.1 | carboxy-terminal domain cyclin | LC |
chr3:24061471-24062322 | 20130731
Length = 283
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 9/219 (4%)
Query: 248 ITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIE---RPRLQLLGITCML 304
+ +R +VDWL++ E KL +T YL V ++D LSK E +L+L+G++ +L
Sbjct: 52 VDSQIRKNVVDWLIQTHYEQKLMPETFYLCVNILDRVLSKINFEVKTMEKLKLIGLSSLL 111
Query: 305 IASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAA 364
+ASKYE+ A + ++ D Y EE+ +ME +L+ + L PT FL R ++A
Sbjct: 112 LASKYEQRKAVGVYHVEYMADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVRNVKAC 171
Query: 365 QASSKNPSXXXXXXXXXXXXXXXMNYGFL-NFLPSMIAASAVFLARWTLDQSSHP-WNPT 422
+S ++ N+ + ++ PS+IAA +V+ AR+ +++ +P W+
Sbjct: 172 VSSDEDK--IMENMVFFFSELSLTNHSIVCDYKPSLIAACSVYCARFVVER--YPFWSND 227
Query: 423 LQHYASYKPSDMKTTVLALQDLQLNIDGCPLTAIRTKYT 461
L+ Y ++ + + + I G + + K++
Sbjct: 228 LKMCTGYSEENLLSCAHVMMKSCIQICGEGIMEVFKKFS 266
>Medtr3g060400.1 | carboxy-terminal domain cyclin | LC |
chr3:23689234-23690085 | 20130731
Length = 283
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 9/219 (4%)
Query: 248 ITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIE---RPRLQLLGITCML 304
+ +R +VDWL++ E KL +T YL V ++D LSK E +L+L+G++ +L
Sbjct: 52 VDSQIRKNVVDWLIQTHYEQKLMPETFYLCVNILDRVLSKINFEVKTMEKLKLIGLSSLL 111
Query: 305 IASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAA 364
+ASKYE+ A + ++ D Y EE+ +ME +L+ + L PT FL R ++A
Sbjct: 112 LASKYEQRKAVGVYHVEYMADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVRNVKAC 171
Query: 365 QASSKNPSXXXXXXXXXXXXXXXMNYGFL-NFLPSMIAASAVFLARWTLDQSSHP-WNPT 422
+S ++ N+ + ++ PS+IAA +V+ AR+ +++ +P W+
Sbjct: 172 VSSDEDK--IMENMVFFFSELSLTNHSIVCDYKPSLIAACSVYCARFVVER--YPFWSND 227
Query: 423 LQHYASYKPSDMKTTVLALQDLQLNIDGCPLTAIRTKYT 461
L+ Y ++ + + + I G + + K++
Sbjct: 228 LKMCTGYSEENLLSCAHVMMKSCIQICGEGIMEVFKKFS 266
>Medtr1g032850.1 | carboxy-terminal domain cyclin | HC |
chr1:11757673-11761366 | 20130731
Length = 555
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 11/170 (6%)
Query: 253 RAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPR-LQLLGITCMLIASKYEE 311
R+ +V W+VE S +L +T++L + L+D FLSK Y + R LQ++GI C+ +A++ EE
Sbjct: 372 RSRMVHWIVEHSYRKQLRPETMFLAINLLDRFLSKGYFKAERNLQIVGIACLTLATRIEE 431
Query: 312 ---INAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASS 368
N + F +I + Y++ EV+ ME V + ++ F PT FL +L+AA A +
Sbjct: 432 NQQYNRVNQKNF-YIEKSVYSRCEVVAMEWMVQEVLEFECFHPTIYNFLCFYLKAANADA 490
Query: 369 KNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQ-SSH 417
+ Y PS IAA+ V LA L+Q +SH
Sbjct: 491 VVEKRVTCLALLALSGPDQLCY-----WPSTIAAAIVILASLELNQKASH 535
>Medtr5g044040.1 | amine-terminal domain cyclin | LC |
chr5:19364442-19364868 | 20130731
Length = 128
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 274 LYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEV 333
L LT+ ++D FL+ N + R LQL+GI+ ML+ SKYEEI P + +F ++D Y+ E++
Sbjct: 7 LCLTINIVDRFLAINLVSRRELQLVGISAMLMTSKYEEIWPPEVNDFVCLSDRAYSHEQI 66
Query: 334 LKMETEVLKSSAYQL 348
L ME ++ + L
Sbjct: 67 LIMEKTIMGMLEWTL 81
>Medtr3g103080.1 | carboxy-terminal domain cyclin | HC |
chr3:47495355-47493059 | 20130731
Length = 320
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 243 TVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPR---LQLLG 299
V D + R ++W+++ E +T YL+V +D FLSK++I+ + ++LL
Sbjct: 57 VVLEDSFKRARLNAINWILKKREALDFHFETAYLSVTYLDRFLSKHFIDGEKDWAMRLLS 116
Query: 300 ITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRR 359
I C+ +A+K EE N P + +F D + + + KME VL S + + T +FL
Sbjct: 117 IACLSLAAKMEECNVPELSQFQLEDDYVFEGKVIQKMELFVLSSLDWNMGIITPFSFLSY 176
Query: 360 FLRAAQASSKNP 371
F++ S +P
Sbjct: 177 FIKKFSNESPSP 188
>Medtr5g011900.1 | amine-terminal domain cyclin | LC |
chr5:3502095-3501016 | 20130731
Length = 241
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Query: 198 NVSQDPDFTDIDADSEDPQLCGL-YATDIYNNFRVAELSRRPSFMETVQRDITQSMRAIL 256
N ++ + D+ +D +L + Y ++ ++ E S Q +I S R L
Sbjct: 47 NKNKKLEVNDVTSDVSKEKLVAMKYIEELNKFYKKDEGSTSTGDYAVSQSNIYISRRPKL 106
Query: 257 VDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPR 316
+D ++ + +Y + ++L+L + ++D FL + +L+L+G+ LIA KY I +
Sbjct: 107 LDRVIGIHTKYAISQESLFLAMNIVDRFLVARSVREEKLRLVGMGAWLIAYKYGGIWHLK 166
Query: 317 IEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRA 363
++ F + DN YT+ ++L +E E + +L T FL F +A
Sbjct: 167 VDTFVTLPDNPYTRAQILWIEEETSGALNRKLTVSTPFHFLSLFFKA 213
>Medtr3g100710.1 | carboxy-terminal domain cyclin | HC |
chr3:46343463-46340451 | 20130731
Length = 362
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Query: 247 DITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPR---LQLLGITCM 303
D+ R ++DW+ +V + G YL++ +D FLS + R +QLL + C+
Sbjct: 91 DLDFEARNEVIDWIQKVRAHFGFGPLCAYLSINYMDRFLSVYEFPKGRAWTMQLLAVACL 150
Query: 304 LIASKYEEINAP-----RIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLR 358
+A+K EE P +I E F+ + + + +ME VL + +++ A T +F+
Sbjct: 151 SLAAKVEETAVPQPLDLQIGESKFV----FEAKTIQRMELLVLSTLKWRMQAITPFSFIE 206
Query: 359 RFLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASA 404
FL + K+ FL F PS IAA+
Sbjct: 207 CFLSKIKDDDKSSLSSSISRSTQLISSTIKGLDFLEFKPSEIAAAV 252
>Medtr4g080990.1 | carboxy-terminal domain cyclin | HC |
chr4:31294716-31295744 | 20130731
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 247 DITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPR---LQLLGITCM 303
D+ R +DW+ +V + G +YL++ +D FLS R +QLL + C+
Sbjct: 86 DLDFGARNEAIDWIQKVQSHFGFGPLCVYLSINYMDRFLSAYQFPERRDWSMQLLAVACL 145
Query: 304 LIASKYEEINAPRIEEFCFITDNTYTKEE--VLKMETEVLKSSAYQLFAPTTKTFLRRFL 361
+A+K +E + PRI E I ++ + E + K+E VL + +++ A T +F+ FL
Sbjct: 146 SLAAKVDETDVPRILELQ-IGESKFVFEAKTIQKIELLVLTTLKWRMQAITPFSFIEYFL 204
Query: 362 RAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASA 404
+ + + FL F PS IAA+
Sbjct: 205 SKINDDKSSLNNSIILQCTQLISSTIKSPDFLEFKPSEIAAAV 247
>Medtr5g015670.1 | carboxy-terminal domain cyclin | HC |
chr5:5464504-5462357 | 20130731
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 253 RAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPR---LQLLGITCMLIASKY 309
R +DW+ ++ T YL++ D FLSK I+ + +QLL + C+ IA+K
Sbjct: 103 RLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKM 162
Query: 310 EEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSK 369
EE + P + E+ + + + + ME +L + +++ PT +L F S+
Sbjct: 163 EEQSVPPLSEYP--IEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCNGSR 220
Query: 370 NPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASAVFLA 408
S ++ +N PS IA++++ A
Sbjct: 221 --SETIITKATQHIVTMVKDFNLMNQRPSTIASASILAA 257
>Medtr5g032550.1 | carboxy-terminal domain cyclin | HC |
chr5:13982616-13985265 | 20130731
Length = 346
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 17/182 (9%)
Query: 233 ELSRRPSFMETVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIER 292
L R + D+ S+R +DW+ + Y G +L L+V +D FLS +
Sbjct: 72 HLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLS--VFQF 129
Query: 293 PR-----LQLLGITCMLIASKYEEINAP-----RIEEFCFITDNTYTKEEVLKMETEVLK 342
PR +QLL + C +A+K EE+ P ++ E F+ + + + +ME +L
Sbjct: 130 PRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFV----FQAKTIQRMELMILS 185
Query: 343 SSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAA 402
S +++ A T +F+ FL A + K P FL F S IAA
Sbjct: 186 SLGWKMRALTPCSFIDYFL-AKISCEKYPDKSLIARSVQLILNIIKGIDFLEFRSSEIAA 244
Query: 403 SA 404
+
Sbjct: 245 AV 246
>Medtr1g107535.1 | carboxy-terminal domain cyclin | HC |
chr1:48851792-48849419 | 20130731
Length = 384
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 257 VDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPR---LQLLGITCMLIASKYEEIN 313
V+W+++V+ Y A T L V +D FL + ++ + +QL+ +TC+ +A+K EE
Sbjct: 111 VEWMLKVNAHYGFSALTATLAVNYLDRFLLSFHFQKEKPWMIQLVAVTCISLAAKVEETQ 170
Query: 314 APRIEEFCFITDNTYTKEE--VLKMETEVLKSSAYQLFAPTTKTFLRRFLR 362
P + + + D Y E + +ME +L + +++ TT +FL +R
Sbjct: 171 VPLLLDLQ-VQDTKYVFEAKTIQRMELLILSTLKWKMHPVTTHSFLDHIIR 220
>Medtr5g032550.2 | carboxy-terminal domain cyclin | HC |
chr5:13982619-13985265 | 20130731
Length = 272
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 247 DITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPR-----LQLLGIT 301
D+ S+R +DW+ + Y G +L L+V +D FLS + PR +QLL +
Sbjct: 86 DLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLS--VFQFPRGVTWTVQLLAVA 143
Query: 302 CMLIASKYEEINAP-----RIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTF 356
C +A+K EE+ P ++ E F+ + + + +ME +L S +++ A T +F
Sbjct: 144 CFSLAAKMEEVKVPQSVDLQVGEPKFV----FQAKTIQRMELMILSSLGWKMRALTPCSF 199
Query: 357 LRRFLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASA 404
+ FL A + K P FL F S IAA+
Sbjct: 200 IDYFL-AKISCEKYPDKSLIARSVQLILNIIKGIDFLEFRSSEIAAAV 246