Miyakogusa Predicted Gene

Lj3g3v0126190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0126190.1 CUFF.40303.1
         (162 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g100900.1 | hypothetical protein | HC | chr1:45305077-4530...   143   8e-35

>Medtr1g100900.1 | hypothetical protein | HC |
           chr1:45305077-45301134 | 20130731
          Length = 203

 Score =  143 bits (360), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 84/163 (51%), Positives = 103/163 (63%), Gaps = 4/163 (2%)

Query: 2   ADSSRNVDVEELISYSDDLLKVLRDP---RDLNGLFHCLQHXXXXXXXXXXXXXXARSLL 58
           +DSSRN DV++LIS S+DL++VL+DP   RDLN +  CL H                S  
Sbjct: 3   SDSSRNFDVDQLISISNDLIEVLQDPANDRDLNIISQCLHHTLSVSSSCHSDLNEVLSSF 62

Query: 59  QDYQKKIDAYKRKIEEAGSETVADAXXXXXXXXXXXXXXXXXXXXXXFRAIRDEFNDLEQ 118
           QDYQKKID++K+KIE A SET ADA                         I +EF+DLEQ
Sbjct: 63  QDYQKKIDSHKQKIEHARSETAADADLELLQRELDEELEKESLLKED-TVISNEFDDLEQ 121

Query: 119 QRMSIQEQKKALHKIEQDKLRTQMTLSMYASVTNIVPNLDDQS 161
           Q++S++EQKK L KIEQ+K RT+M LSMYASVTNIVPNLDDQS
Sbjct: 122 QQISVREQKKKLLKIEQEKQRTRMLLSMYASVTNIVPNLDDQS 164