Miyakogusa Predicted Gene

Lj3g3v0126160.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0126160.1 tr|B9GWP1|B9GWP1_POPTR ATP/ADP transporter
OS=Populus trichocarpa GN=PtrAATP2 PE=4 SV=1,85.44,0,seg,NULL;
TLC,ADP/ATP carrier protein; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; MFS general ,CUFF.40311.1
         (627 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g011460.1 | plastidic ATP/ADP-transporter-like protein | H...   887   0.0  
Medtr2g102740.1 | plastidic ATP/ADP-transporter-like protein | H...   834   0.0  

>Medtr4g011460.1 | plastidic ATP/ADP-transporter-like protein | HC |
           chr4:2807778-2812468 | 20130731
          Length = 629

 Score =  887 bits (2292), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/619 (73%), Positives = 491/619 (79%), Gaps = 8/619 (1%)

Query: 1   MEAVLHSRGLLSLPPNPRNRVLHPSHGLKQRFFTXXXXXX---XXXXXXXXXXXXXXXXX 57
           M AVL +RGLLSLP NP+ RVL   + +K RF +                          
Sbjct: 1   MVAVLQTRGLLSLPTNPKTRVLLQPNSIKHRFLSLRPKTLDGFSLNSNGFSLNSNGFSKI 60

Query: 58  NLSASKTNVFSQKDKKNLFICRXXXXXXX---DGGKPLFGESEVEK-PKILGVEVATLKK 113
           N  +SK N F +K+K NLFIC+            GKP+FGE EV+K PKILG+EV T+KK
Sbjct: 61  NSFSSKVNGFGEKEK-NLFICKAEAAAAAGADSDGKPVFGEIEVDKKPKILGIEVDTMKK 119

Query: 114 IIPLGMMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLS 173
           I+PLG+MFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLS
Sbjct: 120 ILPLGLMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLS 179

Query: 174 NVLSKQALFYTXXXXXXXXXXXXXXXXXXLSSYIHPEAFADKLLNILGPRFLGPLAIMRI 233
           NVLSKQALFY+                  LS+YIHPEAFADKLLN+LGPRFLGPLAI+RI
Sbjct: 180 NVLSKQALFYSVILPFIAFFGAFGFVLYPLSNYIHPEAFADKLLNVLGPRFLGPLAIIRI 239

Query: 234 WTFCLFYVMAELWGSVVVSVLFWGLANQITTVDEAKRFYPLFGLGANVALIFSGRTVKYF 293
           W+FCLFYVMAELWGSVVVSVLFWG ANQITTVDEAKRFYPLFGLGANVALIFSGRTVKYF
Sbjct: 240 WSFCLFYVMAELWGSVVVSVLFWGFANQITTVDEAKRFYPLFGLGANVALIFSGRTVKYF 299

Query: 294 SNMRSNLGPGVDGWAISLKAMMSIVVGMGLVICFLYWWVNNYAPLXXXXXXXXXXXXMGT 353
           SNMR +LGPGVDGWAISLKAMMSIVV MG  ICFLYWW NNY PL            MGT
Sbjct: 300 SNMRKSLGPGVDGWAISLKAMMSIVVAMGFAICFLYWWTNNYVPLPERSIKKKKKPKMGT 359

Query: 354 MESLKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTATG 413
           MESLKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQ+PSPNEYS+FMGDFSTATG
Sbjct: 360 MESLKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATG 419

Query: 414 IATFIMMLLSQFVFDKYGWGVAANITPTVLLLTGVGFFSLILFGGPIAPMLAQFGMTPLL 473
           IATFIMMLLSQ++FDKYGWGVAA ITPTVLLLTGVGFFSLILFGGPIAP LA  GMTPLL
Sbjct: 420 IATFIMMLLSQYIFDKYGWGVAAKITPTVLLLTGVGFFSLILFGGPIAPGLASIGMTPLL 479

Query: 474 AAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQ 533
           AAVYVGA+QNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQ
Sbjct: 480 AAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQ 539

Query: 534 QFMILSFGSLANSTPYLGGXXXXXXXXXXXXXRSLDTQFTALXXXXXXXXXXXXVASVKI 593
           QFMIL+FGSLANSTPYLGG             +SLDTQFTAL             A+VKI
Sbjct: 540 QFMILTFGSLANSTPYLGGVLLVIVLAWLGAAKSLDTQFTALRQEEELEKQMERAAAVKI 599

Query: 594 PVVAENKDGNGSLASASTA 612
           PVV+EN  GNGSL+  +++
Sbjct: 600 PVVSENDGGNGSLSGDASS 618


>Medtr2g102740.1 | plastidic ATP/ADP-transporter-like protein | HC |
           chr2:44272853-44268184 | 20130731
          Length = 595

 Score =  834 bits (2154), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/614 (70%), Positives = 474/614 (77%), Gaps = 28/614 (4%)

Query: 1   MEAVLHSRGLLSLPPNPRNRVLHPSHGLKQRFFTXXXXXXXXXXXXXXXXXXXXXXXNLS 60
           MEAVLHS+G LSLP NP+ R L+PSHGLK RFF+                       N S
Sbjct: 1   MEAVLHSKGFLSLPTNPKTRFLNPSHGLKHRFFSPNSKILGGFSLTNNGLVNL----NSS 56

Query: 61  ASKTNVFSQKDKKNLFICRXXXXXXXDGGKPLFGESEVEKPKILGVEVATLKKIIPLGMM 120
             K  +F +KDK NLFIC+         G+ +F ESE EKPK LGVEV TLKKIIPLGMM
Sbjct: 57  TLKATIFDKKDK-NLFICKAEADSA-GVGEAVFDESETEKPKFLGVEVITLKKIIPLGMM 114

Query: 121 FFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLSNVLSKQA 180
           FFCILFNYTILRDTKDVLVVTA+GSSAEIIPFLKTWVNLPMAIGFMLLYTKLSNVLSKQA
Sbjct: 115 FFCILFNYTILRDTKDVLVVTARGSSAEIIPFLKTWVNLPMAIGFMLLYTKLSNVLSKQA 174

Query: 181 LFYTXXXXXXXXXXXXXXXXXXLSSYIHPEAFADKLLNILGPRFLGPLAIMRIWTFCLFY 240
           LFY+                  LS+YIHP+AFAD LLNILGPRFLGPLAIMRIW+FCLFY
Sbjct: 175 LFYSVIVPFIAFFGAFGFVLYPLSNYIHPQAFADNLLNILGPRFLGPLAIMRIWSFCLFY 234

Query: 241 VMAELWGSVVVSVLFWGLANQITTVDEAKRFYPLFGLGANVALIFSGRTVKYFSNMRSNL 300
           VMAELWGSVV+SVLFWGLANQITTVDEAKRFYPLFGLGANVAL+FSGRTVKYFS++R  L
Sbjct: 235 VMAELWGSVVISVLFWGLANQITTVDEAKRFYPLFGLGANVALVFSGRTVKYFSSLRETL 294

Query: 301 GPGVDGWAISLKAMMSIVVGMGLVICFLYWWVNNYAPLXXXXXXXXXXXXMGTMESLKFL 360
           GPGVDGWAISLKAMMSIVVGMGLVICFLYWWVNNY PL            MGTMESLKFL
Sbjct: 295 GPGVDGWAISLKAMMSIVVGMGLVICFLYWWVNNYVPLPARSQKKKEKPKMGTMESLKFL 354

Query: 361 VSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTATGIATFIMM 420
           +SS+YIRDLATLVVAYGISINLVEVTWKSKLKAQ+PSPNEYS+FMGDFSTATGIATF MM
Sbjct: 355 MSSRYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMM 414

Query: 421 LLSQFVFDKYGWGVAANITPTVLLLTGVGFFSLILFGGPIAPMLAQFGMTPLLAAVYVGA 480
           L+SQF+F+KYGWGVAA ITPTVLL+TGVGFFSLILFG P+AP++ + G+TPLLAAVYVGA
Sbjct: 415 LVSQFIFNKYGWGVAATITPTVLLMTGVGFFSLILFGDPLAPVIGKLGLTPLLAAVYVGA 474

Query: 481 LQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILSF 540
           LQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPL KS   ++   +++  
Sbjct: 475 LQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLRKSWWCVL---LVIGL 531

Query: 541 GSLANSTPYLGGXXXXXXXXXXXXXRSLDTQFTALXXXXXXXXXXXXVASVKIPVVAENK 600
             LA +                   +SLDTQFTAL              +VK+PV+ EN+
Sbjct: 532 AWLAAA-------------------KSLDTQFTALRREEELEKELERETAVKVPVLTENE 572

Query: 601 DGNGSLASASTAGD 614
           D +GS+A   T  D
Sbjct: 573 DEDGSVAPLYTEAD 586