Miyakogusa Predicted Gene

Lj3g3v0075810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0075810.1 Non Characterized Hit- tr|D8U5T3|D8U5T3_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,33.51,0.000000000000003,SUBFAMILY NOT NAMED,NULL;
CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE,NULL; no
descrip,CUFF.40274.1
         (267 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g103280.1 | biotin carboxyl carrier acetyl-CoA carboxylase...   357   6e-99
Medtr5g083520.1 | biotin/lipoyl attachment domain protein | HC |...   121   9e-28
Medtr3g071960.1 | biotin/lipoyl attachment domain protein | HC |...   118   6e-27
Medtr7g013100.1 | biotin carboxyl carrier acetyl-CoA carboxylase...    56   3e-08
Medtr6g015020.1 | biotin carboxyl carrier acetyl-CoA carboxylase...    51   1e-06
Medtr7g080290.1 | biotin carboxyl carrier acetyl-CoA carboxylase...    50   3e-06

>Medtr2g103280.1 | biotin carboxyl carrier acetyl-CoA carboxylase |
           HC | chr2:44448918-44454351 | 20130731
          Length = 277

 Score =  357 bits (916), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 183/269 (68%), Positives = 213/269 (79%), Gaps = 2/269 (0%)

Query: 1   MASCNVKALNLCFGGKRVSLSQQFGTRNWIIRKSVQYTSLDMSQHRVGFLKSSNGPLSQI 60
           + + NVK LNL FG +R   SQ FGTR+WI RKS+QY  L  S+  V  L  SN   ++I
Sbjct: 8   LGTQNVKVLNLHFGQERAEFSQHFGTRSWISRKSLQYARLVASKQTVRSLTPSNDQSAEI 67

Query: 61  QPVTSSENGSKEIESSGLTSTLIPKLNEVEFLLTKLCET-SIGELELKLAGFHLHVLRDS 119
           Q V+ SE+GS+E +SSGLT+ L P  N+VEFLLT LC+T SIGELELKL GFHL V+RD 
Sbjct: 68  QSVSRSEDGSEESKSSGLTNQLFPNFNDVEFLLTNLCDTASIGELELKLDGFHLRVVRDL 127

Query: 120 TEKVKTLPRQTPASVNINVVPEAPKSNGPVAS-SSLAILKPEPSSGSVQRFLDKAADEGF 178
           TEK KTLP   PA V+IN   EAPK NG V++ ++LAI KP PSS S++ FL+KAADEG 
Sbjct: 128 TEKSKTLPPSIPAPVSINTPAEAPKPNGSVSTLTTLAISKPAPSSLSIEGFLEKAADEGL 187

Query: 179 VIIYSPKVGFFRRSRTIKGKRAPPSCKETQKVQEGQVICYIEQLGGQLPIESDVSGEVIR 238
           VII+SP VG FRRSRTIKGKRAPPSC+E Q V+EG+VICYIEQLGGQLP+ESDVSGEVI+
Sbjct: 188 VIIHSPTVGIFRRSRTIKGKRAPPSCQEMQNVEEGKVICYIEQLGGQLPVESDVSGEVIK 247

Query: 239 ILREDGDPVGYGDALIAILPSFPGIKKLQ 267
           ILREDGDPVGYGD LIAILPSFPGIKKLQ
Sbjct: 248 ILREDGDPVGYGDTLIAILPSFPGIKKLQ 276


>Medtr5g083520.1 | biotin/lipoyl attachment domain protein | HC |
           chr5:36047530-36052948 | 20130731
          Length = 279

 Score =  121 bits (303), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 105/182 (57%), Gaps = 5/182 (2%)

Query: 87  NEVEFLLTKLC-ETSIGELELKLAGFHLHVLRD---STEKVKTLPRQTPASVNINVVPEA 142
           N  E L++++C ET I EL+LK+  F +H+ R+   S   V  +    P  V+       
Sbjct: 99  NGFEALISEVCDETEIAELKLKVGEFEMHMKRNIGLSAAPVSNISPTKPM-VDSASSTPT 157

Query: 143 PKSNGPVASSSLAILKPEPSSGSVQRFLDKAADEGFVIIYSPKVGFFRRSRTIKGKRAPP 202
           P  +    + +   +            L+ + ++ +V++ S  VG F+R RT+KG + PP
Sbjct: 158 PSPSKSSPAKTNPFVNDSNDKSPKLAALEASGNKNYVLVASTTVGSFQRGRTVKGNKLPP 217

Query: 203 SCKETQKVQEGQVICYIEQLGGQLPIESDVSGEVIRILREDGDPVGYGDALIAILPSFPG 262
            CKE   +++GQVI Y++  G  LP++SDV GEV+++L +DG+ VGYGDALIA+LPSF  
Sbjct: 218 VCKEGDMIKDGQVIGYVDNFGTSLPVKSDVDGEVLKLLFQDGEAVGYGDALIAVLPSFHD 277

Query: 263 IK 264
           IK
Sbjct: 278 IK 279


>Medtr3g071960.1 | biotin/lipoyl attachment domain protein | HC |
           chr3:32322523-32329477 | 20130731
          Length = 274

 Score =  118 bits (295), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 112/194 (57%), Gaps = 26/194 (13%)

Query: 90  EFLLTKLC-ETSIGELELKLAGFHLHVLRDSTEKVKTLPRQTPASVNINVVPEAPKSNGP 148
           E L+  +C ET I EL+LK+  F +H+ R+          + P S NI+     P  + P
Sbjct: 88  EALILDVCDETEIAELKLKVGEFEMHLKRNIGAT------KAPLS-NISPTTPPPIPSKP 140

Query: 149 VASSSLAILKPEPSSGSVQR----------------FLDKAADEGFVIIYSPKVGFFRRS 192
           +  S+    +P P + S ++                 L+ +    + ++ SP VG FRR 
Sbjct: 141 MDESAPTTAQPLPPTSSSEKTNPFANVSSQKSSKLIALEASGTSTYALVSSPTVGSFRRG 200

Query: 193 RTIKGKRAPPSCKETQKVQEGQVICYIEQ--LGGQLPIESDVSGEVIRILREDGDPVGYG 250
           RT+KG++ PP CKE   ++EGQVI Y++Q  +G  +PI+SDV+GEV+++L E+GDPVG+G
Sbjct: 201 RTVKGQKHPPICKEGDVIREGQVIGYLDQFGVGAGIPIKSDVAGEVLKLLLEEGDPVGFG 260

Query: 251 DALIAILPSFPGIK 264
           D ++A+LPSF  IK
Sbjct: 261 DPILAVLPSFHDIK 274


>Medtr7g013100.1 | biotin carboxyl carrier acetyl-CoA carboxylase |
           HC | chr7:3720376-3725453 | 20130731
          Length = 287

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 3/75 (4%)

Query: 184 PKVGFFRRSRTIKGKRAPPSCKETQKVQEGQVICYIEQLGGQLPIESDVSGEVIRILRED 243
           P  G F R     G   PP  K   +VQ+GQV+C IE +     IE+D SG ++ +L ED
Sbjct: 216 PMAGTFYR---CPGPGEPPFVKVGDQVQKGQVVCIIEAMKLMNEIEADRSGTIVEVLVED 272

Query: 244 GDPVGYGDALIAILP 258
           G PV  G  L AI P
Sbjct: 273 GKPVSVGMPLFAIAP 287


>Medtr6g015020.1 | biotin carboxyl carrier acetyl-CoA carboxylase |
           HC | chr6:4863345-4867174 | 20130731
          Length = 278

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 3/75 (4%)

Query: 184 PKVGFFRRSRTIKGKRAPPSCKETQKVQEGQVICYIEQLGGQLPIESDVSGEVIRILRED 243
           P  G F R     G   PP  +    VQ+GQVIC IE +     IE+D SG +  IL ED
Sbjct: 207 PMAGTFYR---CPGPGEPPFVQVGDTVQKGQVICIIEAMKLMNEIEADQSGTIAEILVED 263

Query: 244 GDPVGYGDALIAILP 258
           G PV     L  I+P
Sbjct: 264 GKPVSVDLPLFVIVP 278


>Medtr7g080290.1 | biotin carboxyl carrier acetyl-CoA carboxylase |
           HC | chr7:30536157-30530313 | 20130731
          Length = 276

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 181 IYSPKVGFFRRSRTIKGKRAPPSCKETQKVQEGQVICYIEQLGGQLPIESDVSGEVIRIL 240
           + SP  G F RS        PP  K   +V++GQV+C IE +     IE+D SG ++ I+
Sbjct: 202 LKSPMAGTFYRS---PAPGEPPFVKVGDEVKKGQVVCIIEAMKLMNEIEADKSGTIVEII 258

Query: 241 REDGDPVGYGDALIAILP 258
            ED  PV     L  I P
Sbjct: 259 AEDAKPVSVDTPLFVIEP 276