Miyakogusa Predicted Gene

Lj3g3v0075800.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0075800.1 Non Characterized Hit- tr|C6T923|C6T923_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19335
PE,85.13,0,seg,NULL; JAB,JAB1/Mov34/MPN/PAD-1; JAB1/MPN domain,NULL;
BRCA1/BRCA2-CONTAINING COMPLEX SUBUNIT 3,N,CUFF.40278.1
         (432 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g103110.1 | Mov34/MPN/PAD-1 family protein | HC | chr2:444...   676   0.0  
Medtr2g103110.3 | Mov34/MPN/PAD-1 family protein | HC | chr2:444...   558   e-159
Medtr2g103110.2 | Mov34/MPN/PAD-1 family protein | HC | chr2:444...   516   e-146
Medtr3g108790.1 | COP9 signalosome complex subunit 5 | HC | chr3...    52   9e-07

>Medtr2g103110.1 | Mov34/MPN/PAD-1 family protein | HC |
           chr2:44442391-44447886 | 20130731
          Length = 443

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/445 (77%), Positives = 366/445 (82%), Gaps = 16/445 (3%)

Query: 1   MSLTSVKMSEEVWLTCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 60
           MSLTSVKMSEEVWLTC THA STETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTSVKMSEEVWLTCATHAFSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 60

Query: 61  KDRVETNPEQLAAASALADRMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGMYQLLD 120
           KDRVETNPEQLAAASALAD+MT TTGRTTRVIGWYHSHPHITVLPSHVDVRTQ MYQLLD
Sbjct: 61  KDRVETNPEQLAAASALADKMTVTTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD 120

Query: 121 SGFIGLIFSCYSEDANKVGRIQVIAFQSSDGKQNHMSRPIPLSPVNRXXXXXXXXXXXXX 180
           SGFIGLIFSCY+EDANK+G+IQVIAFQSSDGKQN MSRPIPLSPVN+             
Sbjct: 121 SGFIGLIFSCYNEDANKIGKIQVIAFQSSDGKQNSMSRPIPLSPVNKSSIIHIDSSPSSS 180

Query: 181 XXXXXXXGYFKAESPDQDTXXXXXXXXXXXXXXXXXLGNFFANADASYLGGEKGGGNYLL 240
                  GYFK +SP+QDT                 LGNFFANADA+YLG  K G NY L
Sbjct: 181 ENLTTRSGYFKGDSPEQDTGDSRSAGASKGGGRSSELGNFFANADANYLGSVKDGENYHL 240

Query: 241 NNSDSKEIDIDPMDMSESMQEAMHRSNLDMSGAEYVRREIPLYVLPSLSLINLDSPLASY 300
           NNSD   +D DPMDMSESMQEAMHRSNLDMSGAEYVR+EIPL+VLPSLS INLDSPL+SY
Sbjct: 241 NNSDIIAVD-DPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPSLSFINLDSPLSSY 299

Query: 301 MDLQHVIFEEERTAYNQAISQNMRDEKVHPLTFIHHTSTYQASLCKLIEYCLSPAITALQ 360
            DLQHV+FEEERTAYNQAI QN RD KVHPLTFIHHTSTYQASLCKLIEYCLSPAI ALQ
Sbjct: 300 TDLQHVLFEEERTAYNQAILQNTRDGKVHPLTFIHHTSTYQASLCKLIEYCLSPAINALQ 359

Query: 361 DRLRENEVRLAIMSEEAKSLEAEA--YRGSEASLSSPRRVASPVHQVASPVHRGSLSPAS 418
           DRLRENE+RLA++SEEAKSLEAEA   RGSEASL SPR+VASP  QVASP+HRGS SP  
Sbjct: 360 DRLRENEIRLAVLSEEAKSLEAEASTSRGSEASLGSPRQVASP-RQVASPIHRGSSSPRQ 418

Query: 419 RN------------VASPGSRSRRG 431
           RN            VASPGSRSR+G
Sbjct: 419 RNSQSSSESLGSKSVASPGSRSRKG 443


>Medtr2g103110.3 | Mov34/MPN/PAD-1 family protein | HC |
           chr2:44442391-44447885 | 20130731
          Length = 350

 Score =  558 bits (1437), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 280/350 (80%), Positives = 293/350 (83%), Gaps = 1/350 (0%)

Query: 1   MSLTSVKMSEEVWLTCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 60
           MSLTSVKMSEEVWLTC THA STETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTSVKMSEEVWLTCATHAFSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 60

Query: 61  KDRVETNPEQLAAASALADRMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGMYQLLD 120
           KDRVETNPEQLAAASALAD+MT TTGRTTRVIGWYHSHPHITVLPSHVDVRTQ MYQLLD
Sbjct: 61  KDRVETNPEQLAAASALADKMTVTTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD 120

Query: 121 SGFIGLIFSCYSEDANKVGRIQVIAFQSSDGKQNHMSRPIPLSPVNRXXXXXXXXXXXXX 180
           SGFIGLIFSCY+EDANK+G+IQVIAFQSSDGKQN MSRPIPLSPVN+             
Sbjct: 121 SGFIGLIFSCYNEDANKIGKIQVIAFQSSDGKQNSMSRPIPLSPVNKSSIIHIDSSPSSS 180

Query: 181 XXXXXXXGYFKAESPDQDTXXXXXXXXXXXXXXXXXLGNFFANADASYLGGEKGGGNYLL 240
                  GYFK +SP+QDT                 LGNFFANADA+YLG  K G NY L
Sbjct: 181 ENLTTRSGYFKGDSPEQDTGDSRSAGASKGGGRSSELGNFFANADANYLGSVKDGENYHL 240

Query: 241 NNSDSKEIDIDPMDMSESMQEAMHRSNLDMSGAEYVRREIPLYVLPSLSLINLDSPLASY 300
           NNSD   +D DPMDMSESMQEAMHRSNLDMSGAEYVR+EIPL+VLPSLS INLDSPL+SY
Sbjct: 241 NNSDIIAVD-DPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPSLSFINLDSPLSSY 299

Query: 301 MDLQHVIFEEERTAYNQAISQNMRDEKVHPLTFIHHTSTYQASLCKLIEY 350
            DLQHV+FEEERTAYNQAI QN RD KVHPLTFIHHTSTYQASLCKLIEY
Sbjct: 300 TDLQHVLFEEERTAYNQAILQNTRDGKVHPLTFIHHTSTYQASLCKLIEY 349


>Medtr2g103110.2 | Mov34/MPN/PAD-1 family protein | HC |
           chr2:44442391-44447886 | 20130731
          Length = 363

 Score =  516 bits (1330), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/354 (73%), Positives = 278/354 (78%), Gaps = 16/354 (4%)

Query: 92  IGWYHSHPHITVLPSHVDVRTQGMYQLLDSGFIGLIFSCYSEDANKVGRIQVIAFQSSDG 151
           IGWYHSHPHITVLPSHVDVRTQ MYQLLDSGFIGLIFSCY+EDANK+G+IQVIAFQSSDG
Sbjct: 12  IGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCYNEDANKIGKIQVIAFQSSDG 71

Query: 152 KQNHMSRPIPLSPVNRXXXXXXXXXXXXXXXXXXXXGYFKAESPDQDTXXXXXXXXXXXX 211
           KQN MSRPIPLSPVN+                    GYFK +SP+QDT            
Sbjct: 72  KQNSMSRPIPLSPVNKSSIIHIDSSPSSSENLTTRSGYFKGDSPEQDTGDSRSAGASKGG 131

Query: 212 XXXXXLGNFFANADASYLGGEKGGGNYLLNNSDSKEIDIDPMDMSESMQEAMHRSNLDMS 271
                LGNFFANADA+YLG  K G NY LNNSD   +D DPMDMSESMQEAMHRSNLDMS
Sbjct: 132 GRSSELGNFFANADANYLGSVKDGENYHLNNSDIIAVD-DPMDMSESMQEAMHRSNLDMS 190

Query: 272 GAEYVRREIPLYVLPSLSLINLDSPLASYMDLQHVIFEEERTAYNQAISQNMRDEKVHPL 331
           GAEYVR+EIPL+VLPSLS INLDSPL+SY DLQHV+FEEERTAYNQAI QN RD KVHPL
Sbjct: 191 GAEYVRKEIPLHVLPSLSFINLDSPLSSYTDLQHVLFEEERTAYNQAILQNTRDGKVHPL 250

Query: 332 TFIHHTSTYQASLCKLIEYCLSPAITALQDRLRENEVRLAIMSEEAKSLEAEA--YRGSE 389
           TFIHHTSTYQASLCKLIEYCLSPAI ALQDRLRENE+RLA++SEEAKSLEAEA   RGSE
Sbjct: 251 TFIHHTSTYQASLCKLIEYCLSPAINALQDRLRENEIRLAVLSEEAKSLEAEASTSRGSE 310

Query: 390 ASLSSPRRVASPVHQVASPVHRGSLSPASRN------------VASPGSRSRRG 431
           ASL SPR+VASP  QVASP+HRGS SP  RN            VASPGSRSR+G
Sbjct: 311 ASLGSPRQVASP-RQVASPIHRGSSSPRQRNSQSSSESLGSKSVASPGSRSRKG 363


>Medtr3g108790.1 | COP9 signalosome complex subunit 5 | HC |
           chr3:50262107-50265078 | 20130731
          Length = 357

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 13/145 (8%)

Query: 6   VKMSEEVWLTCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRRKDRVE 65
           VK+S    L  V HA S  T E+MGL+ G    +   S+  +   A P   ++ R +   
Sbjct: 60  VKISALALLKMVVHARSGGTIEVMGLMQG---KTDADSIIVMDAFALPVEGTETRVNA-- 114

Query: 66  TNPEQLAAASALAD--RMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGMYQLLDSGF 123
               Q  A   + D  +     GR   V+GWYHSHP      S +DV TQ + Q     F
Sbjct: 115 ----QADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF 170

Query: 124 IGLIFSCYSEDANKVGRIQVIAFQS 148
           + ++           G++++ AF++
Sbjct: 171 LAVVID--PTRTVSAGKVEIGAFRT 193