Miyakogusa Predicted Gene

Lj3g3v0075760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0075760.1 tr|Q1YXI2|Q1YXI2_PHOPR Hypothetical aspartate
racemase OS=Photobacterium profundum 3TCK
GN=P3TCK_008,29.75,0.00000000000001,seg,NULL;
Asp_Glu_race,Asp/Glu/hydantoin racemase; no description,Asp/Glu
racemase; Aspartate/glutam,CUFF.40271.1
         (240 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g103300.1 | aspartate racemase | HC | chr2:44461907-444594...   265   2e-71
Medtr4g114000.1 | aspartate racemase | HC | chr4:46911085-469094...   101   7e-22

>Medtr2g103300.1 | aspartate racemase | HC | chr2:44461907-44459443
           | 20130731
          Length = 321

 Score =  265 bits (678), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 151/240 (62%), Positives = 165/240 (68%), Gaps = 19/240 (7%)

Query: 5   MLTMSLSNPSQTSLCFVT----NPCPRYLCKPRLWQLQATPPSSIILNADESGKFSRNLH 60
           ML MSL   SQT   FV+    N  PRYLCK R W++ +TPPSS+ILNADESGKFS+NL 
Sbjct: 1   MLAMSLCYQSQTLFGFVSILNPNLNPRYLCKSRSWKVLSTPPSSVILNADESGKFSKNLV 60

Query: 61  GSNLVSGKGEESGAPFLTQXXXXXXXXXXXXDATLNFISKLVELSSEDGRRTSSNIPFVL 120
           GS        +S +PF  Q            DATLNF+ KLVELSS+DG+     IPF+L
Sbjct: 61  GS-----VRNDSVSPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNP---IPFLL 112

Query: 121 CSDPVLNKELLSYERSCFVASKGESLKPDCYSQIVQSLRSKRAFLENSGAGCIVMPCNVS 180
           CSDP+LNKELLSYERS       ES K D  SQIVQSLR+KR FLENSGA CIVMPCNVS
Sbjct: 113 CSDPILNKELLSYERSL------ESFKVDS-SQIVQSLRNKRVFLENSGARCIVMPCNVS 165

Query: 181 HSWYEQVSKGCSVTFLHMAECVXXXXXXXXXXXXXXGSPLRIGVLATNATLAAGFYKEKL 240
           HSWYEQVS GCSV FLHMAECV              GSPLRIGVLATNATLAAGFYKEKL
Sbjct: 166 HSWYEQVSIGCSVPFLHMAECVAKELKEAKLKPLEAGSPLRIGVLATNATLAAGFYKEKL 225


>Medtr4g114000.1 | aspartate racemase | HC | chr4:46911085-46909437
           | 20130731
          Length = 333

 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 6/192 (3%)

Query: 50  DESGKFSRNLHGSNLVSGKGEESGAPFLTQXXXXXXXXXXXXDATLNFISKLVELSSEDG 109
           DESG +    +G++L+ G    +    L+Q             +TL F+ KL   SS +G
Sbjct: 48  DESGNYEEPGNGTSLMRGHISSASCIKLSQQNTIGVIGGVSVLSTLVFLEKLACWSSRNG 107

Query: 110 RRTSSNIPFVLCSDPVLNKELLSYERSCFVASKGESLKPDCYSQI-VQSLRSKRAFLENS 168
           +      PFV+CSDPVL+K L    R  F +++      +   ++ +Q+LR K   L+ S
Sbjct: 108 KECP---PFVVCSDPVLSKAL--SLRGSFPSTRTRIDHIELNQELMIQNLRHKINVLQQS 162

Query: 169 GAGCIVMPCNVSHSWYEQVSKGCSVTFLHMAECVXXXXXXXXXXXXXXGSPLRIGVLATN 228
           GA  + +PC++SH+W++++SK  S+ FLH+ +CV               S +RIG+L T+
Sbjct: 163 GARGLALPCHLSHAWHKEISKDSSLPFLHVGDCVAMELKNAKMKPIHATSTVRIGLLTTD 222

Query: 229 ATLAAGFYKEKL 240
           ++    +YKEKL
Sbjct: 223 SSFVVCYYKEKL 234