Miyakogusa Predicted Gene

Lj3g3v0044220.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0044220.1 Non Characterized Hit- tr|I3SGC8|I3SGC8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.77,0,Thioredoxin-like,Thioredoxin-like fold;
Complex1_24kDa,Thioredoxin-like 2Fe-2S ferredoxin; NADH
DEHY,CUFF.40269.1
         (163 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g104110.1 | NADH-ubiquinone oxidoreductase 24 kDa subunit,...   309   7e-85
Medtr2g104110.2 | NADH-ubiquinone oxidoreductase 24 kDa subunit,...   305   1e-83

>Medtr2g104110.1 | NADH-ubiquinone oxidoreductase 24 kDa subunit,
           putative | HC | chr2:44858093-44862711 | 20130731
          Length = 251

 Score =  309 bits (792), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 144/163 (88%), Positives = 153/163 (93%)

Query: 1   MNEVARIIEVAPIRVYEVATFYSMFNRAKVGKYHLLVCGTTPCMIRGSREIEEALLNHLG 60
           M+ VA++IEVAPIRVYEVATFYSMFNR+KVGKYHLLVCGTTPCMIRGSREIE ALL HLG
Sbjct: 89  MDAVAKVIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMIRGSREIEAALLKHLG 148

Query: 61  VKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVELVEM 120
           VKRNEVT+DG FSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTP++VVE+VE 
Sbjct: 149 VKRNEVTQDGFFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPEKVVEIVEK 208

Query: 121 LRKGEKPPPGTQNPQRIKCGPEGGNTTLLGEPKPPPCRDLDAC 163
           LRKGEKPP GTQNP RI+  PEGGNTTLL EPKPPPCRDLDAC
Sbjct: 209 LRKGEKPPHGTQNPHRIRSAPEGGNTTLLSEPKPPPCRDLDAC 251


>Medtr2g104110.2 | NADH-ubiquinone oxidoreductase 24 kDa subunit,
           putative | HC | chr2:44858135-44862710 | 20130731
          Length = 212

 Score =  305 bits (782), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 143/161 (88%), Positives = 152/161 (94%)

Query: 3   EVARIIEVAPIRVYEVATFYSMFNRAKVGKYHLLVCGTTPCMIRGSREIEEALLNHLGVK 62
           +VA++IEVAPIRVYEVATFYSMFNR+KVGKYHLLVCGTTPCMIRGSREIE ALL HLGVK
Sbjct: 52  KVAKVIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMIRGSREIEAALLKHLGVK 111

Query: 63  RNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVELVEMLR 122
           RNEVT+DG FSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTP++VVE+VE LR
Sbjct: 112 RNEVTQDGFFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPEKVVEIVEKLR 171

Query: 123 KGEKPPPGTQNPQRIKCGPEGGNTTLLGEPKPPPCRDLDAC 163
           KGEKPP GTQNP RI+  PEGGNTTLL EPKPPPCRDLDAC
Sbjct: 172 KGEKPPHGTQNPHRIRSAPEGGNTTLLSEPKPPPCRDLDAC 212