Miyakogusa Predicted Gene
- Lj3g3v0042050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0042050.1 Non Characterized Hit- tr|I1ISY6|I1ISY6_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,38.41,5e-19,Broad-Complex, Tramtrack and Bric a brac,BTB/POZ-like;
POZ domain,BTB/POZ fold; SUBFAMILY NOT NAMED,,CUFF.40225.1
(201 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g028190.1 | BTB/POZ domain protein POB1 | HC | chr8:105286... 244 5e-65
Medtr8g028190.3 | BTB/POZ domain protein POB1 | HC | chr8:105286... 241 4e-64
Medtr8g028190.2 | BTB/POZ domain protein POB1 | HC | chr8:105286... 202 2e-52
Medtr4g088460.1 | BTB/POZ domain protein | LC | chr4:35082007-35... 130 7e-31
>Medtr8g028190.1 | BTB/POZ domain protein POB1 | HC |
chr8:10528673-10524289 | 20130731
Length = 551
Score = 244 bits (622), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/261 (55%), Positives = 160/261 (61%), Gaps = 64/261 (24%)
Query: 3 SDSNFNVGFAFNDSRFSDKVLRIEVMTDPFD------SVTSIADWLRHCKKRRREN---- 52
S S+ + GFAFNDS FSD+VLRIE+M DP D + TSIADW RH +KRRRE+
Sbjct: 24 SSSDADFGFAFNDSNFSDRVLRIEIMADPVDPQPDSENCTSIADWARH-RKRRREDIKKE 82
Query: 53 ----------------------------------------GDEAANCN------MDGSAA 66
GDEA N N MD S
Sbjct: 83 NVGDLPDEQILNGNQPDMDDCVASENQEEEVVAMVEESPSGDEAVNDNDEPNLGMDYSEP 142
Query: 67 TVVRVKTLHISSPILAAKSPFFYQLFSNVTSESEQRHITLSINASEETGLMELLKFMYSN 126
VVRVKTLHISSPILAAKSPFFY+LFSN ESE RH+TL INASEE LMELL FMYSN
Sbjct: 143 AVVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALMELLNFMYSN 202
Query: 127 TLNISAAPALLDVLMAADKFDVPSCMKY----LLNSPMTTDSALLYLELPHTVV---AAQ 179
TL+I AP LLDVLMAADKF+V SCM+Y L N MT +SALLYLELP +V+ A Q
Sbjct: 203 TLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTPESALLYLELPSSVLMADAVQ 262
Query: 180 PLIDAAKQYLVDRYKDITHKQ 200
PL DAAKQYL RYKDIT Q
Sbjct: 263 PLTDAAKQYLASRYKDITKFQ 283
>Medtr8g028190.3 | BTB/POZ domain protein POB1 | HC |
chr8:10528673-10524338 | 20130731
Length = 559
Score = 241 bits (615), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 145/269 (53%), Positives = 160/269 (59%), Gaps = 72/269 (26%)
Query: 3 SDSNFNVGFAFNDSRFSDKVLRIEVMTDPFD------SVTSIADWLRHCKKRRREN---- 52
S S+ + GFAFNDS FSD+VLRIE+M DP D + TSIADW RH +KRRRE+
Sbjct: 24 SSSDADFGFAFNDSNFSDRVLRIEIMADPVDPQPDSENCTSIADWARH-RKRRREDIKKE 82
Query: 53 ------------------------------------------------GDEAANCN---- 60
GDEA N N
Sbjct: 83 NVGDLPDEQILNGNQPDMDDCVASENQEEEVVAMVEESPSGDEAVNDLGDEAVNDNDEPN 142
Query: 61 --MDGSAATVVRVKTLHISSPILAAKSPFFYQLFSNVTSESEQRHITLSINASEETGLME 118
MD S VVRVKTLHISSPILAAKSPFFY+LFSN ESE RH+TL INASEE LME
Sbjct: 143 LGMDYSEPAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALME 202
Query: 119 LLKFMYSNTLNISAAPALLDVLMAADKFDVPSCMKY----LLNSPMTTDSALLYLELPHT 174
LL FMYSNTL+I AP LLDVLMAADKF+V SCM+Y L N MT +SALLYLELP +
Sbjct: 203 LLNFMYSNTLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTPESALLYLELPSS 262
Query: 175 VV---AAQPLIDAAKQYLVDRYKDITHKQ 200
V+ A QPL DAAKQYL RYKDIT Q
Sbjct: 263 VLMADAVQPLTDAAKQYLASRYKDITKFQ 291
>Medtr8g028190.2 | BTB/POZ domain protein POB1 | HC |
chr8:10528628-10524338 | 20130731
Length = 591
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/161 (68%), Positives = 119/161 (73%), Gaps = 13/161 (8%)
Query: 53 GDEAANCN------MDGSAATVVRVKTLHISSPILAAKSPFFYQLFSNVTSESEQRHITL 106
GDEA N N MD S VVRVKTLHISSPILAAKSPFFY+LFSN ESE RH+TL
Sbjct: 163 GDEAVNDNDEPNLGMDYSEPAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTL 222
Query: 107 SINASEETGLMELLKFMYSNTLNISAAPALLDVLMAADKFDVPSCMKY----LLNSPMTT 162
INASEE LMELL FMYSNTL+I AP LLDVLMAADKF+V SCM+Y L N MT
Sbjct: 223 RINASEEAALMELLNFMYSNTLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTP 282
Query: 163 DSALLYLELPHTVV---AAQPLIDAAKQYLVDRYKDITHKQ 200
+SALLYLELP +V+ A QPL DAAKQYL RYKDIT Q
Sbjct: 283 ESALLYLELPSSVLMADAVQPLTDAAKQYLASRYKDITKFQ 323
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 7/56 (12%)
Query: 3 SDSNFNVGFAFNDSRFSDKVLRIEVMTDPFD------SVTSIADWLRHCKKRRREN 52
S S+ + GFAFNDS FSD+VLRIE+M DP D + TSIADW RH +KRRRE+
Sbjct: 24 SSSDADFGFAFNDSNFSDRVLRIEIMADPVDPQPDSENCTSIADWARH-RKRRRED 78
>Medtr4g088460.1 | BTB/POZ domain protein | LC |
chr4:35082007-35083494 | 20130731
Length = 362
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 112/189 (59%), Gaps = 31/189 (16%)
Query: 8 NVGFAFNDSRFSDKVLRIEVMTDPFDSVTSIADWLRHCKKRRRENGDEAANC---NMDGS 64
+VG AF+ + F + L I++M ENG EAAN N+
Sbjct: 15 DVGSAFDYNIFLGRTLHIDIMG---------------------ENGGEAANADDANLQMD 53
Query: 65 AATVVRVKTLHISSPILAAKSPFFYQLFSNVTSESEQRHITLSINASEETGLMELLKFMY 124
++ V+V T+ ISS ILAAKSP F++LFSN ES+Q H+TL I ASEE ++ LLKFM
Sbjct: 54 SSIAVKVITMQISSAILAAKSPLFFKLFSNGMRESDQTHVTLRITASEEAPVIALLKFMN 113
Query: 125 SNTLNISAAPALLDVLMAADKFDVPSCMKY----LLNSPMTTDSALLYLELPHTVV---A 177
+N LN+++ L+VL+AADKF+V SC+++ LL+ MT + L YL+LP +V+
Sbjct: 114 TNILNVTSPLVFLEVLVAADKFEVASCLRHCNQLLLSISMTLEFVLPYLDLPSSVLMDDG 173
Query: 178 AQPLIDAAK 186
QPL DA K
Sbjct: 174 VQPLTDAKK 182