Miyakogusa Predicted Gene

Lj3g3v0042020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0042020.1 Non Characterized Hit- tr|I1Q2K4|I1Q2K4_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,40.56,2e-18,BTB,BTB/POZ-like; no description,BTB/POZ fold; POZ
domain,BTB/POZ fold; BTB,BTB/POZ; SUBFAMILY NOT N,CUFF.40223.1
         (427 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028190.1 | BTB/POZ domain protein POB1 | HC | chr8:105286...   444   e-124
Medtr8g028190.2 | BTB/POZ domain protein POB1 | HC | chr8:105286...   428   e-120
Medtr8g028190.3 | BTB/POZ domain protein POB1 | HC | chr8:105286...   428   e-120
Medtr4g088460.1 | BTB/POZ domain protein | LC | chr4:35082007-35...   140   3e-33

>Medtr8g028190.1 | BTB/POZ domain protein POB1 | HC |
           chr8:10528673-10524289 | 20130731
          Length = 551

 Score =  444 bits (1141), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 265/527 (50%), Positives = 313/527 (59%), Gaps = 107/527 (20%)

Query: 5   SCESSFSFAFNDTRFSDKLLRIEIMNDPI-------------------KRRR-------- 37
           S ++ F FAFND+ FSD++LRIEIM DP+                   KRRR        
Sbjct: 25  SSDADFGFAFNDSNFSDRVLRIEIMADPVDPQPDSENCTSIADWARHRKRRREDIKKENV 84

Query: 38  ---------------------CEN--------------GDEAANNNDSI-WTMDYSGATV 61
                                 EN              GDEA N+ND     MDYS   V
Sbjct: 85  GDLPDEQILNGNQPDMDDCVASENQEEEVVAMVEESPSGDEAVNDNDEPNLGMDYSEPAV 144

Query: 62  VRVKTLHISSLILAAKSPFFYKLFSNGMSESEQRQITLRINASEEAGLMELLKFMYSNTL 121
           VRVKTLHISS ILAAKSPFFYKLFSNGM ESE R +TLRINASEEA LMELL FMYSNTL
Sbjct: 145 VRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALMELLNFMYSNTL 204

Query: 122 NISATPALLDVLMAGGKFFVALCMKY----LLNPPMTLDSALLYLELPYTVV---AAQPL 174
           +I   P LLDVLMA  KF VA CM+Y    L N  MT +SALLYLELP +V+   A QPL
Sbjct: 205 SIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTPESALLYLELPSSVLMADAVQPL 264

Query: 175 IDAAKHYLVDQYKDMYNKQVKEERL--------------------ALHTFALNWARQKYE 214
            DAAK YL  +YKD+   Q +   L                    A++ F L WAR +Y 
Sbjct: 265 TDAAKQYLASRYKDITKFQEEVMNLPLAGVEAILSSDDLQVASEDAVYDFVLKWARHQYG 324

Query: 215 SLKERREVLGTRLACLIRFPYMTCEKLKIVLTCNDFEHEGASKLVHEALSFKAEAPDRQQ 274
           +L+ERREVLG RLA  IRFP+MTC KLK VLTC+DFEH+ +SKLV EAL FKAE P RQ+
Sbjct: 325 NLEERREVLGLRLARFIRFPHMTCRKLKKVLTCSDFEHDVSSKLVLEALFFKAEVPHRQR 384

Query: 275 TLAAEESISLSRRFVERAYK---------------TTMDMCLTRAECVAMFPSGHVHSKP 319
           +LAAEE    SRRF+ERAYK                 + + L R EC  +FPSG V+S+ 
Sbjct: 385 SLAAEEPACSSRRFLERAYKYRPVKVVEFELPRQQCVVYLDLKREECSNLFPSGRVYSQA 444

Query: 320 SRLAGQMFFLSAQCDMDEHDFFHCCSLSLGMKTGYSRSIAVDFQFSVRLRPTVDYFIMCK 379
             L GQ FFLSA C+MD+   FHC  L LGM+   S S  VD++F+ R RPT ++    K
Sbjct: 445 FHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFTVDYEFAARSRPTEEFVSKYK 504

Query: 380 SNHTFTPGTRSVSRIRNPFKVPWTSFIAEDSLFFINDVLHLRAKLWI 426
            N+TFT G ++V   RN F +PWTSF+AED L+FIN VLHLRA+L I
Sbjct: 505 GNYTFT-GGKAVG-YRNLFAIPWTSFMAEDCLYFINGVLHLRAELTI 549


>Medtr8g028190.2 | BTB/POZ domain protein POB1 | HC |
           chr8:10528628-10524338 | 20130731
          Length = 591

 Score =  428 bits (1101), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/429 (56%), Positives = 283/429 (65%), Gaps = 45/429 (10%)

Query: 41  GDEAANNNDSI-WTMDYSGATVVRVKTLHISSLILAAKSPFFYKLFSNGMSESEQRQITL 99
           GDEA N+ND     MDYS   VVRVKTLHISS ILAAKSPFFYKLFSNGM ESE R +TL
Sbjct: 163 GDEAVNDNDEPNLGMDYSEPAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTL 222

Query: 100 RINASEEAGLMELLKFMYSNTLNISATPALLDVLMAGGKFFVALCMKY----LLNPPMTL 155
           RINASEEA LMELL FMYSNTL+I   P LLDVLMA  KF VA CM+Y    L N  MT 
Sbjct: 223 RINASEEAALMELLNFMYSNTLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTP 282

Query: 156 DSALLYLELPYTVV---AAQPLIDAAKHYLVDQYKDMYNKQVKEERL------------- 199
           +SALLYLELP +V+   A QPL DAAK YL  +YKD+   Q +   L             
Sbjct: 283 ESALLYLELPSSVLMADAVQPLTDAAKQYLASRYKDITKFQEEVMNLPLAGVEAILSSDD 342

Query: 200 -------ALHTFALNWARQKYESLKERREVLGTRLACLIRFPYMTCEKLKIVLTCNDFEH 252
                  A++ F L WAR +Y +L+ERREVLG RLA  IRFP+MTC KLK VLTC+DFEH
Sbjct: 343 LQVASEDAVYDFVLKWARHQYGNLEERREVLGLRLARFIRFPHMTCRKLKKVLTCSDFEH 402

Query: 253 EGASKLVHEALSFKAEAPDRQQTLAAEESISLSRRFVERAYK---------------TTM 297
           + +SKLV EAL FKAE P RQ++LAAEE    SRRF+ERAYK                 +
Sbjct: 403 DVSSKLVLEALFFKAEVPHRQRSLAAEEPACSSRRFLERAYKYRPVKVVEFELPRQQCVV 462

Query: 298 DMCLTRAECVAMFPSGHVHSKPSRLAGQMFFLSAQCDMDEHDFFHCCSLSLGMKTGYSRS 357
            + L R EC  +FPSG V+S+   L GQ FFLSA C+MD+   FHC  L LGM+   S S
Sbjct: 463 YLDLKREECSNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVS 522

Query: 358 IAVDFQFSVRLRPTVDYFIMCKSNHTFTPGTRSVSRIRNPFKVPWTSFIAEDSLFFINDV 417
             VD++F+ R RPT ++    K N+TFT G ++V   RN F +PWTSF+AED L+FIN V
Sbjct: 523 FTVDYEFAARSRPTEEFVSKYKGNYTFT-GGKAVG-YRNLFAIPWTSFMAEDCLYFINGV 580

Query: 418 LHLRAKLWI 426
           LHLRA+L I
Sbjct: 581 LHLRAELTI 589


>Medtr8g028190.3 | BTB/POZ domain protein POB1 | HC |
           chr8:10528673-10524338 | 20130731
          Length = 559

 Score =  428 bits (1100), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/429 (56%), Positives = 283/429 (65%), Gaps = 45/429 (10%)

Query: 41  GDEAANNNDSI-WTMDYSGATVVRVKTLHISSLILAAKSPFFYKLFSNGMSESEQRQITL 99
           GDEA N+ND     MDYS   VVRVKTLHISS ILAAKSPFFYKLFSNGM ESE R +TL
Sbjct: 131 GDEAVNDNDEPNLGMDYSEPAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTL 190

Query: 100 RINASEEAGLMELLKFMYSNTLNISATPALLDVLMAGGKFFVALCMKY----LLNPPMTL 155
           RINASEEA LMELL FMYSNTL+I   P LLDVLMA  KF VA CM+Y    L N  MT 
Sbjct: 191 RINASEEAALMELLNFMYSNTLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTP 250

Query: 156 DSALLYLELPYTVV---AAQPLIDAAKHYLVDQYKDMYNKQVKEERL------------- 199
           +SALLYLELP +V+   A QPL DAAK YL  +YKD+   Q +   L             
Sbjct: 251 ESALLYLELPSSVLMADAVQPLTDAAKQYLASRYKDITKFQEEVMNLPLAGVEAILSSDD 310

Query: 200 -------ALHTFALNWARQKYESLKERREVLGTRLACLIRFPYMTCEKLKIVLTCNDFEH 252
                  A++ F L WAR +Y +L+ERREVLG RLA  IRFP+MTC KLK VLTC+DFEH
Sbjct: 311 LQVASEDAVYDFVLKWARHQYGNLEERREVLGLRLARFIRFPHMTCRKLKKVLTCSDFEH 370

Query: 253 EGASKLVHEALSFKAEAPDRQQTLAAEESISLSRRFVERAYK---------------TTM 297
           + +SKLV EAL FKAE P RQ++LAAEE    SRRF+ERAYK                 +
Sbjct: 371 DVSSKLVLEALFFKAEVPHRQRSLAAEEPACSSRRFLERAYKYRPVKVVEFELPRQQCVV 430

Query: 298 DMCLTRAECVAMFPSGHVHSKPSRLAGQMFFLSAQCDMDEHDFFHCCSLSLGMKTGYSRS 357
            + L R EC  +FPSG V+S+   L GQ FFLSA C+MD+   FHC  L LGM+   S S
Sbjct: 431 YLDLKREECSNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVS 490

Query: 358 IAVDFQFSVRLRPTVDYFIMCKSNHTFTPGTRSVSRIRNPFKVPWTSFIAEDSLFFINDV 417
             VD++F+ R RPT ++    K N+TFT G ++V   RN F +PWTSF+AED L+FIN V
Sbjct: 491 FTVDYEFAARSRPTEEFVSKYKGNYTFT-GGKAVG-YRNLFAIPWTSFMAEDCLYFINGV 548

Query: 418 LHLRAKLWI 426
           LHLRA+L I
Sbjct: 549 LHLRAELTI 557


>Medtr4g088460.1 | BTB/POZ domain protein | LC |
           chr4:35082007-35083494 | 20130731
          Length = 362

 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/183 (47%), Positives = 113/183 (61%), Gaps = 17/183 (9%)

Query: 4   DSCESSFSFAFNDTRFSDKLLRIEIMNDPIKRRRCENGDEAANNNDSIWTMDYSGATVVR 63
           D        AF+   F  + L I+IM         ENG EAAN +D+   MD S A  V+
Sbjct: 10  DGASEDVGSAFDYNIFLGRTLHIDIMG--------ENGGEAANADDANLQMDSSIA--VK 59

Query: 64  VKTLHISSLILAAKSPFFYKLFSNGMSESEQRQITLRINASEEAGLMELLKFMYSNTLNI 123
           V T+ ISS ILAAKSP F+KLFSNGM ES+Q  +TLRI ASEEA ++ LLKFM +N LN+
Sbjct: 60  VITMQISSAILAAKSPLFFKLFSNGMRESDQTHVTLRITASEEAPVIALLKFMNTNILNV 119

Query: 124 SATPALLDVLMAGGKFFVALCMKY----LLNPPMTLDSALLYLELPYTVV---AAQPLID 176
           ++    L+VL+A  KF VA C+++    LL+  MTL+  L YL+LP +V+     QPL D
Sbjct: 120 TSPLVFLEVLVAADKFEVASCLRHCNQLLLSISMTLEFVLPYLDLPSSVLMDDGVQPLTD 179

Query: 177 AAK 179
           A K
Sbjct: 180 AKK 182