Miyakogusa Predicted Gene

Lj3g3v0030640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0030640.1 Non Characterized Hit- tr|I1MCC8|I1MCC8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33259
PE,69.23,0.0000000000006,BRAP2,BRCA1-associated 2; zf-UBP,Zinc finger,
UBP-type; zf-RING_2,Zinc finger, RING-type; RING/U-box,CUFF.40217.1
         (467 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g104600.1 | zinc finger, C3HC4 type (RING finger) protein ...   636   0.0  
Medtr2g104600.2 | zinc finger, C3HC4 type (RING finger) protein ...   600   e-172
Medtr4g114970.1 | zinc finger (ubiquitin-hydrolase) domain prote...   410   e-114
Medtr4g114970.2 | zinc finger (ubiquitin-hydrolase) domain prote...   356   3e-98

>Medtr2g104600.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr2:45076840-45081476 | 20130731
          Length = 426

 Score =  636 bits (1640), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/420 (76%), Positives = 342/420 (81%), Gaps = 42/420 (10%)

Query: 31  GNPRIEETRGLMHLIXXXXXXXXXXXSLPVDRKPLVCVVGVPNHMTYADFCQFCGSFIHH 90
           GNPRIEETRGLMH+              P    P      +P                 H
Sbjct: 29  GNPRIEETRGLMHV-------------FPEQTPP-----SLP-----------------H 53

Query: 91  ILEMRIVRMDGMEDHYSVLIRFDEQQYADTFYTHYNGRRFSSLEVEECRVLFTLDVQYTG 150
           ILEMRIVRM+ MED YSVLIRFDEQ   D FYTHYNGRRFSSLEVE CRV+FTLDVQYTG
Sbjct: 54  ILEMRIVRMESMEDRYSVLIRFDEQDSTDAFYTHYNGRRFSSLEVEVCRVVFTLDVQYTG 113

Query: 151 SIEHAQPSSASSTEQPTCPVCLERLDQDTSGILTTICNHSFHCSCISKWADSSCPVCRYC 210
           SIEHAQPS+A+STEQPTCPVCLERLDQDTSGILTTICNHSFHCSCISKWADSSCPVCRYC
Sbjct: 114 SIEHAQPSNATSTEQPTCPVCLERLDQDTSGILTTICNHSFHCSCISKWADSSCPVCRYC 173

Query: 211 QQQAEKSICFVCQTTENLWICVICGFVGCGRYKGGHAIIHWKETQHCYSLEVETKRVWDY 270
           QQQAE SICFVCQTTENLWICVICGFVGCGRYKGGHAIIHWKETQHCYSLEVETKRVWDY
Sbjct: 174 QQQAENSICFVCQTTENLWICVICGFVGCGRYKGGHAIIHWKETQHCYSLEVETKRVWDY 233

Query: 271 AGDNYVHRLILSKTDGKLVELNSHCAHADXXXXXXXXEDSAVSEAIHNSKVEAIVNEYNE 330
            GDNYVHRLI SKTDGKLVELNSHC HAD         D+A+ EAI NSKV+AIVNEYNE
Sbjct: 234 VGDNYVHRLIQSKTDGKLVELNSHCVHADSGSCG----DNAMREAILNSKVQAIVNEYNE 289

Query: 331 LLASQLENQKLYFESLLQEVKEETERKISQGVQKAVSLKQQKIQAKIDRFNKEKKFLEEI 390
           LLA+QLENQKLYFESLLQ+V++ETE KIS  VQKAVSLKQ KI AKIDR NKEKKFL+E+
Sbjct: 290 LLATQLENQKLYFESLLQQVEQETEGKISVAVQKAVSLKQHKIHAKIDRCNKEKKFLDEL 349

Query: 391 NENLVKNGEIWKAKLLEIEEREKKTLKLNNDRLTGLEKQLSDLMICLEGGKT---VPVSN 447
           N+NL+KN EIWKAKLLEIEEREKK LKL  DR+T LEKQLS+LM+CLEGGKT    P+SN
Sbjct: 350 NDNLLKNEEIWKAKLLEIEEREKKALKLTTDRVTDLEKQLSNLMVCLEGGKTEEHPPLSN 409


>Medtr2g104600.2 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr2:45076840-45081476 | 20130731
          Length = 410

 Score =  600 bits (1548), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 305/420 (72%), Positives = 323/420 (76%), Gaps = 58/420 (13%)

Query: 31  GNPRIEETRGLMHLIXXXXXXXXXXXSLPVDRKPLVCVVGVPNHMTYADFCQFCGSFIHH 90
           GNPRIEETRGLMH+            SLPV RKPL CV+GVPNHMTYADFCQFCGSFI H
Sbjct: 29  GNPRIEETRGLMHVFPEQTPP-----SLPVGRKPLACVLGVPNHMTYADFCQFCGSFIQH 83

Query: 91  ILEMRIVRMDGMEDHYSVLIRFDEQQYADTFYTHYNGRRFSSLEVEECRVLFTLDVQYTG 150
           ILEMRIVRM+ MED YSVLIRFDEQ   D FYTHYN                        
Sbjct: 84  ILEMRIVRMESMEDRYSVLIRFDEQDSTDAFYTHYN------------------------ 119

Query: 151 SIEHAQPSSASSTEQPTCPVCLERLDQDTSGILTTICNHSFHCSCISKWADSSCPVCRYC 210
                                 ERLDQDTSGILTTICNHSFHCSCISKWADSSCPVCRYC
Sbjct: 120 ----------------------ERLDQDTSGILTTICNHSFHCSCISKWADSSCPVCRYC 157

Query: 211 QQQAEKSICFVCQTTENLWICVICGFVGCGRYKGGHAIIHWKETQHCYSLEVETKRVWDY 270
           QQQAE SICFVCQTTENLWICVICGFVGCGRYKGGHAIIHWKETQHCYSLEVETKRVWDY
Sbjct: 158 QQQAENSICFVCQTTENLWICVICGFVGCGRYKGGHAIIHWKETQHCYSLEVETKRVWDY 217

Query: 271 AGDNYVHRLILSKTDGKLVELNSHCAHADXXXXXXXXEDSAVSEAIHNSKVEAIVNEYNE 330
            GDNYVHRLI SKTDGKLVELNSHC HAD         D+A+ EAI NSKV+AIVNEYNE
Sbjct: 218 VGDNYVHRLIQSKTDGKLVELNSHCVHADSGSCG----DNAMREAILNSKVQAIVNEYNE 273

Query: 331 LLASQLENQKLYFESLLQEVKEETERKISQGVQKAVSLKQQKIQAKIDRFNKEKKFLEEI 390
           LLA+QLENQKLYFESLLQ+V++ETE KIS  VQKAVSLKQ KI AKIDR NKEKKFL+E+
Sbjct: 274 LLATQLENQKLYFESLLQQVEQETEGKISVAVQKAVSLKQHKIHAKIDRCNKEKKFLDEL 333

Query: 391 NENLVKNGEIWKAKLLEIEEREKKTLKLNNDRLTGLEKQLSDLMICLEGGKT---VPVSN 447
           N+NL+KN EIWKAKLLEIEEREKK LKL  DR+T LEKQLS+LM+CLEGGKT    P+SN
Sbjct: 334 NDNLLKNEEIWKAKLLEIEEREKKALKLTTDRVTDLEKQLSNLMVCLEGGKTEEHPPLSN 393


>Medtr4g114970.1 | zinc finger (ubiquitin-hydrolase) domain protein
           | HC | chr4:47398700-47403947 | 20130731
          Length = 479

 Score =  410 bits (1054), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/446 (47%), Positives = 287/446 (64%), Gaps = 17/446 (3%)

Query: 32  NPRIEETRGLMHLIXXXXXXXXXXXSLPVDRKPLVCVVGVPNHMTYADFCQFCGSF---- 87
           NP+  E RG++HL            +      PL+ ++ VPN+ ++ DF +FCG      
Sbjct: 30  NPKFTERRGVLHLFRSASHSSLPNSNS---LSPLLFILAVPNYFSFDDFIRFCGPHYLDR 86

Query: 88  IHHILEMRIVRMDGMEDHYSVLIRFDEQQYADTFYTHYNGRRFSSLEVEECRVLFTLDVQ 147
           +HH+L    +R DGMED YSVLIRFD+Q  AD F+T++NG++FS  E E C +LF L V+
Sbjct: 87  LHHLL---FIRNDGMEDRYSVLIRFDDQLAADAFHTYFNGKKFSPAEAEICHILFLLSVE 143

Query: 148 YTGSIEHAQPSSASSTEQPTCPVCLERLDQDTSGILTTICNHSFHCSCISKWADSSCPVC 207
           Y+   E A    A  TE PTCPVCLERLD DTSGI TT+C+HSF C C+SKW   SC VC
Sbjct: 144 YSECEEVAGTPPAGCTEIPTCPVCLERLDPDTSGICTTLCDHSFQCPCVSKWTYLSCQVC 203

Query: 208 RYCQQQAEKSICFVCQTTENLWICVICGFVGCGRYKGGHAIIHWKETQHCYSLEVETKRV 267
           R CQQQ EK  CF+C T +++W+C+ICGFVGCGRYK GHAI HWK+TQHCYSL+  T+++
Sbjct: 204 RLCQQQDEKPTCFICGTLDDVWVCMICGFVGCGRYKEGHAIRHWKDTQHCYSLDFRTQQI 263

Query: 268 WDYAGDNYVHRL--ILSKTDGKLVELNSHCAHADXX-XXXXXXEDSAVSEAIHNSKVEAI 324
           WDY GDNYVHRL    S+ DGK  E++ HC   +         ED  V+ A  NSKVEAI
Sbjct: 264 WDYVGDNYVHRLNQDQSRIDGK-SEMHVHCMSLEGECDTCECSEDLEVNGAFFNSKVEAI 322

Query: 325 VNEYNELLASQLENQKLYFESLLQEVKEETERKISQGVQKAVSLKQQKIQAKIDRFNKEK 384
           V+EYN LL SQLE Q+ Y+ESLL E + + E  IS+ V+KA +     IQ ++++  +E+
Sbjct: 323 VDEYNRLLTSQLETQRQYYESLLIEARSKEESSISEAVEKAATSGMLDIQNELEKCTEER 382

Query: 385 KFLEEINENLVKNGEIWKAKLLEIEEREKKTLKLNNDRLTGLEKQLSDLMICLEGGKTVP 444
             + E+N  L+KN E+W+ K+ E EERE  ++K  N+++  LE+Q+ D+ I L+  KT+ 
Sbjct: 383 NVVAEVNRKLIKNSEMWRKKIKEAEEREAASMKSMNEKILDLEEQIRDITIFLQAQKTID 442

Query: 445 V---SNEIKDETVFDNSKESSSTKGS 467
               SN IK+ TV   + E  S   S
Sbjct: 443 KMSDSNGIKEGTVLPVAHEQPSPGNS 468


>Medtr4g114970.2 | zinc finger (ubiquitin-hydrolase) domain protein
           | HC | chr4:47398700-47403947 | 20130731
          Length = 411

 Score =  356 bits (913), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 182/367 (49%), Positives = 240/367 (65%), Gaps = 14/367 (3%)

Query: 32  NPRIEETRGLMHLIXXXXXXXXXXXSLPVDRKPLVCVVGVPNHMTYADFCQFCGSF---- 87
           NP+  E RG++HL            +      PL+ ++ VPN+ ++ DF +FCG      
Sbjct: 30  NPKFTERRGVLHLFRSASHSSLPNSNS---LSPLLFILAVPNYFSFDDFIRFCGPHYLDR 86

Query: 88  IHHILEMRIVRMDGMEDHYSVLIRFDEQQYADTFYTHYNGRRFSSLEVEECRVLFTLDVQ 147
           +HH+L    +R DGMED YSVLIRFD+Q  AD F+T++NG++FS  E E C +LF L V+
Sbjct: 87  LHHLL---FIRNDGMEDRYSVLIRFDDQLAADAFHTYFNGKKFSPAEAEICHILFLLSVE 143

Query: 148 YTGSIEHAQPSSASSTEQPTCPVCLERLDQDTSGILTTICNHSFHCSCISKWADSSCPVC 207
           Y+   E A    A  TE PTCPVCLERLD DTSGI TT+C+HSF C C+SKW   SC VC
Sbjct: 144 YSECEEVAGTPPAGCTEIPTCPVCLERLDPDTSGICTTLCDHSFQCPCVSKWTYLSCQVC 203

Query: 208 RYCQQQAEKSICFVCQTTENLWICVICGFVGCGRYKGGHAIIHWKETQHCYSLEVETKRV 267
           R CQQQ EK  CF+C T +++W+C+ICGFVGCGRYK GHAI HWK+TQHCYSL+  T+++
Sbjct: 204 RLCQQQDEKPTCFICGTLDDVWVCMICGFVGCGRYKEGHAIRHWKDTQHCYSLDFRTQQI 263

Query: 268 WDYAGDNYVHRL--ILSKTDGKLVELNSHCAHADXX-XXXXXXEDSAVSEAIHNSKVEAI 324
           WDY GDNYVHRL    S+ DGK  E++ HC   +         ED  V+ A  NSKVEAI
Sbjct: 264 WDYVGDNYVHRLNQDQSRIDGK-SEMHVHCMSLEGECDTCECSEDLEVNGAFFNSKVEAI 322

Query: 325 VNEYNELLASQLENQKLYFESLLQEVKEETERKISQGVQKAVSLKQQKIQAKIDRFNKEK 384
           V+EYN LL SQLE Q+ Y+ESLL E + + E  IS+ V+KA +     IQ ++++  +E+
Sbjct: 323 VDEYNRLLTSQLETQRQYYESLLIEARSKEESSISEAVEKAATSGMLDIQNELEKCTEER 382

Query: 385 KFLEEIN 391
             + E+ 
Sbjct: 383 NVVAEVT 389